Difference between revisions of "Os10g0191000"

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(Created page with "{{JaponicaGene| GeneName = Os10g0191000| Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein| Version = NM_001070812.2 GI:297610204 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0191000|
 
GeneName = Os10g0191000|

Revision as of 21:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0191000

Description

RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein

Version

NM_001070812.2 GI:297610204 GeneID:4348236

Length

2661 bp

Definition

Oryza sativa Japonica Group Os10g0191000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5978931..5981591

Sequence Coding Region

5978931..5979370,5979938..5980126,5980155..5980331,5980421..5980505,5980830..5980981
,5981051..5981591

Expression

GEO Profiles:Os10g0191000

Genome Context

<gbrowseImage1> name=NC_008403:5978931..5981591 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5978931..5981591 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagtaggatggaatgatacaaacattgttctaattccaaaagttaaaagtccatctgttctcaaagagttgcgtccaagcagcctttgtaatgtagtgtacaaaattatctctaaggttctagcaaaccggctgaagtcaatcctcccagagatcatcttagacacgcaaagtgcttttgttcctggaagactaatcactgataatgtacttattgcctatgaagcaacccattttttgcagaataagagaaatggaaaagatggctatgcggccatcaaattggatatgtctaaagcctacgatagagttgaatggcctttcctactccatatgctgcgaagacttggctttgatgaaaaatggaataggttgataatgaattgtgtcacaacagtaaattataaaataaaggtcaatggtgactatacggaagtgataaagccagacagggggctgcgtcaaggtgatcctttatcaccatatttgtttgttatatgtgcagaggcattttcagcagcaattcaggcagcagaagatgactctcttttacttttaaaagctactgaatctgtagcaaacgagatgaagcaaattattctggactatgagaggtgctcaggccagattgttaatagagataaatctgtagtgatgttcagttcaaacatggatgaggaggaaaaaaaggataaaatcatgaagccaaagagtcaaggaggtttggggtttagagacctacattccttcaatattgctatgttggctcggcaagtcaaggaaacaaatgtcatattcctggagaagtattctaaagggaatacaattactaagaaaaggcgtaatatggcgggtcggaaatggagagcatataaacatctggtcagacccatggctgccaagagatatgagattcgtcacaacaagaagaggggcatctttaattacaagggccagtgggatattgaattaatccagcagattttcaatgagaacgatgcaaaaatcataacaagaataccactaagggaaggtcaggaagattttattgcttggcaaccagatactaaaggaattttctcggtaaaatcagcatacaagctacatgagaagatcctcaatgaattgcaaggacagataggagaaggtggttggggtgtagtggccagagatacagatggatgtcctctcatgatggctgctgggaatttacagaatttgcataatgctaatcaagcagaagctttagcatgcatccaagctttgaaattagctaatgatatgggaatgggccacattattgttgaaactgatgctcaagctctgaaagcggctttgttggatgaaacacaggatagaagtgtaaacgctgttatcattagagaggccaaatttttgcttgcaatgaattttaatgtccatcaagtcatgtattgtcctagagaatgtaatcgtgctgcgcatgagcttgctaaaattggtgcttctctgggtccacgaagccaatttgtttggcttgaaggattcccagatgttgtttgtaatttggtagctagtgattcagctggactacctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MPVGWNDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVLAN RLKSILPEIILDTQSAFVPGRLITDNVLIAYEATHFLQNKRNGKDGYAAIKLDMSKAY DRVEWPFLLHMLRRLGFDEKWNRLIMNCVTTVNYKIKVNGDYTEVIKPDRGLRQGDPL SPYLFVICAEAFSAAIQAAEDDSLLLLKATESVANEMKQIILDYERCSGQIVNRDKSV VMFSSNMDEEEKKDKIMKPKSQGGLGFRDLHSFNIAMLARQVKETNVIFLEKYSKGNT ITKKRRNMAGRKWRAYKHLVRPMAAKRYEIRHNKKRGIFNYKGQWDIELIQQIFNEND AKIITRIPLREGQEDFIAWQPDTKGIFSVKSAYKLHEKILNELQGQIGEGGWGVVARD TDGCPLMMAAGNLQNLHNANQAEALACIQALKLANDMGMGHIIVETDAQALKAALLDE TQDRSVNAVIIREAKFLLAMNFNVHQVMYCPRECNRAAHELAKIGASLGPRSQFVWLE GFPDVVCNLVASDSAGLPA</aaseq>

Gene Sequence

<dnaseqindica>2222..2661#1466..1654#1261..1437#1087..1171#611..762#1..541#atgccagtaggatggaatgatacaaacattgttctaattccaaaagttaaaagtccatctgttctcaaagagttgcgtccaagcagcctttgtaatgtagtgtacaaaattatctctaaggttctagcaaaccggctgaagtcaatcctcccagagatcatcttagacacgcaaagtgcttttgttcctggaagactaatcactgataatgtacttattgcctatgaagcaacccattttttgcagaataagagaaatggaaaagatggctatgcggccatcaaattggatatgtctaaagcctacgatagagttgaatggcctttcctactccatatgctgcgaagacttggctttgatgaaaaatggaataggttgataatgaattgtgtcacaacagtaaattataaaataaaggtcaatggtgactatacggaagtgataaagccagacagggggctgcgtcaaggtgatcctttatcaccatatttgtttgttatatgtgcagaggcattttcagcagcaattcaggcagcagaaggttcaaaaagattatgtggtttacgcatttgtcgaggtgctcctattctaacacacctgttttttgcagatgactctcttttacttttaaaagctactgaatctgtagcaaacgagatgaagcaaattattctggactatgagaggtgctcaggccagattgttaatagagataaatctgtagtgatgttcagttcaaacatggatgaggaggaaaaaaaggtattttcacataccttgggtataaactgtatagctcataatgatagatatcttgggttaccggtatttattggtagatccaaagcgaaaacctttgaatacttaaaggagaaaatctggagatgcatccagggatggaaggaaaaatttttatccaaggcaggaaaagaaattttaattaaagcagttgcacaagctattccaacatatgcaatgtcatgtttttatttaacaaaatctctttgtgatgagttaacttctatgattttgcgcttctggtgggctcaacatgataatgacaaaaaaattcattggttgggaaaggataaaatcatgaagccaaagagtcaaggaggtttggggtttagagacctacattccttcaatattgctatgttggctcggcaaggttggcgccttatccaaaatcctgattctctttgctcaaggctgctaaaggccaaatattttcctaactgtaatgttcttgatgcgcagtcaaggaaacaaatgtcatattcctggagaagtattctaaagggaatacaattactaagaaaaggcgtaatatggcgggtcggaaatggagagcatataaacatctggtcagacccatggctgccaagagatatgagattcgtcacaacaagaagaggggcatctttaattacaagggtgtgtgagctcattgatccaacaacaggccagtgggatattgaattaatccagcagattttcaatgagaacgatgcaaaaatcataacaagaataccactaagggaaggtcaggaagattttattgcttggcaaccagatactaaaggaattttctcggtaaaatcagcatacaagctacatgagaagatcctcaatgaattgcaaggacagataggtagttcctgtgctaaaacctcttcttttaattgggagcgtatttggagatataacattcctaataagataaaacactttatatggagatttgcacataatagtctgcctttgaggctaaacatcaaaagaaaaggagttgatattgacactttgtgcccggtttgtaggcgttttgatgaggatggaggccactgttttctcagatgcaaaatggtacgaaaagtgtggagtaaattatttttggaggaggtacgcctcaaacttttatactgcccttcaccactgcatgtgctagaggagatctggacaatggatgtaagcaaacaaattaaaatcttaactatgttttggttgtggtggtctgctcgaaacaaattggttgaaggggaaggttattcagttctgcatgaagtgccttttcttactaaccgaattatttcagaatttgaacattttttacaatatgaacaaaataaatgtcttatgaactgtgcgaactcatggaaaccacctagagctggaatgataaagctaaatattgatggatcttttttccaacatacaggagaaggtggttggggtgtagtggccagagatacagatggatgtcctctcatgatggctgctgggaatttacagaatttgcataatgctaatcaagcagaagctttagcatgcatccaagctttgaaattagctaatgatatgggaatgggccacattattgttgaaactgatgctcaagctctgaaagcggctttgttggatgaaacacaggatagaagtgtaaacgctgttatcattagagaggccaaatttttgcttgcaatgaattttaatgtccatcaagtcatgtattgtcctagagaatgtaatcgtgctgcgcatgagcttgctaaaattggtgcttctctgggtccacgaagccaatttgtttggcttgaaggattcccagatgttgtttgtaatttggtagctagtgattcagctggactacctgcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0191000, RefSeq:Os10g0191000