Difference between revisions of "Os10g0375600"

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(Created page with "{{JaponicaGene| GeneName = Os10g0375600| Description = Similar to ER66 protein (Fragment)| Version = NM_001071005.1 GI:115481753 GeneID:4348485| Length = 7235 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0375600|
 
GeneName = Os10g0375600|

Revision as of 21:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0375600

Description

Similar to ER66 protein (Fragment)

Version

NM_001071005.1 GI:115481753 GeneID:4348485

Length

7235 bp

Definition

Oryza sativa Japonica Group Os10g0375600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12192690..12199924

Sequence Coding Region

12192876..12192924,12193683..12193802,12194699..12194814,12194886..12194974,12195174..12195216
,12196057..12196201,12196330..12196449,12196528..12196847,12197058..12197432
,12197537..12198231,12198325..12198868,12199099..12199443,12199560..12199670

Expression

GEO Profiles:Os10g0375600

Genome Context

<gbrowseImage1> name=NC_008403:12192690..12199924 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12192690..12199924 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggacgcgcggcgcttcgcggtcgtgccgcagctagatattgcgcagatactgaaggaggctcaacaacgatggttgcgtcctgctgaaatttgcgaaatacttaaaaactacaaaagtttccgtattgcaccagaaccaccaaacaggcctcaaagtggctcgcttttcctatttgatcggaaagtattgagatactttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaagcacatgaaaggctgaaatctggaagtattgatgtgcttcactgctactatgcacatggagaagagaatgagaacttccaaaggaggacttactggatgttggaagaggattttatgcacattgttcttgtacattatcttgagaccaagggtgggaaatctcgtactaggggcaacaatgacatgcatcaagcagctgttatggatagtccattaagtcaattaccttcacaaactatagatggtgaaagctcacttagtggacagttctctgaatatgaagaggcagaatcagatgtttattcaggaggaaccggataccactctttcactcagatgcagcagcagcaaaatggaattggacctgtgactgatgcttctatgttcagttctcgtgtttctgcttcatccataggtaattatcagggacaacatgctatgggacatacaacaaacttctattctagtagtcaacatgattcacctcttgttctcagtgatccaaaccttgaacttgcaaataatggacatgagtcattgtggaatggggttatgaaacctgatgaagggactgttcaaatgactcatctacaacctcctgttcatcctgagcaaggcatgttcaccacagaaggccaaggggttgaatatttgacattcgatgaagtatattctgatggactcagtctgaaggatataggtgctgcaggtgctgatgtagaaccattctggcagctctctagtgctactgctgatatatctgcaacagagaacagcgtccaacaaaatgatggatctctaggggcagctattggcttcccatttttgaaaactcagtcatccaatctatctgacatcctgaaagacagctttaagaaatctgacagttttacaagatggatgagcaaagagcttcttgatgttgaggattcgcaaattcagtctagctcaggggcatactggaacactgaagaggcagatagtatcatcgaagcatcaagccgtgagccactggatcagttcaccgtggcccctatggttttgcaagaccagctattcagtatagttgatttttcgccaagctggacatatgcaggctcgaagaccaaggttttagttactggtagattcttacatgctaatgaagtcacggagagatgcaagtggtcatgcatgtttggagaagttgaaattcaagcggagatttcagcagatgggactcttcgatgttattctcccccgcataaaccaggcagagtccctttctatgtcacctgttccaacaggttagcctgtagtgaagtacgtgagtttgaatttcgaccaagtgactctcaatacatggatgctcctagcccgcttggtgcaaccaacaaagtttatttccagatacgtcttgacaacctattgtccctggggccagatgtgtaccaagctactataactaaccccagtaaggagatgatcgacttgagcaagaagattagttcactgttggcaaacaatgatgagtggtccaagttacttaaattggctgatgataatgagcctcttagccatgatcagcaggatcagtatgctgaaaacttaattaaggaaaaattgcatgtctggcttctccataaagtaggcgatggtggcaaaggacccagtgtgttagatgatgaggggctgggtgttcttcatcttgcagctgcccttggttatgattgggccataaggccaactgttactgctggtgtgaacataaatttcagagattttcatggatggactgcattacattgggctgcattttgtggcagagaacggactgtagtagcacttattgcactgggagcagctcctggagctttgacagatccacatcctaattaccctgctgaaagcacaccagcagaccttgcatctgctaacggacataagggcatctctggtttcctggcagagtcctctctgacaagtcatcttcaagccctcaatctgaaggaagccaatatgtctgaaatatctggtctacctggtattggagatgtaactgagagaaatgcatctcagcctgcaattggagattccttaggtgctgttcgaaatgccgctcaagctgctgctcgaatatatcaagttttcagggtgcaatccttccagaggaaacaagcggtccaatatgagggtgacaaaggtggcatatcggacgaacacgcactttcactcctgtctatgaagccatccaagtcaggccagcttgatcccctgcatgctgcagcatctcgtatacaaaataaatataggggatggaaggggagaaaggaatttcttctcttcagacaacgaattgtgaagatccaggctcatgtgcgaggccaccaggtgaggaagcattatcggaaaatagtttggtctgttgggatagtggagaaagttatattgcgctggaggcgaagaagggctgggttacgtggttttaggcctacagaaggtgcaatagagagcagcagtggtggcacaagtagcaatttggtcaaagataaacctgctggagatgattatgatttcttgcaagaaggacggaagcaaactgaagaaaggctgcagaaagctcttgccagagtgaagtccatggttcaatacccagaagcaagggatcagtaccaaaggattttgaatgttgtttcgaaaatgcaagagtctcagaccgtgcaagaaaagattttagacgaatcaaccgagatggatgaaggtgatttcatgagtgaattcaaggagctgtgggatgatgatacaccactccctggttatttctag</cdnaseq>

Protein Sequence

<aaseq>MAAAADARRFAVVPQLDIAQILKEAQQRWLRPAEICEILKNYKS FRIAPEPPNRPQSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVL HCYYAHGEENENFQRRTYWMLEEDFMHIVLVHYLETKGGKSRTRGNNDMHQAAVMDSP LSQLPSQTIDGESSLSGQFSEYEEAESDVYSGGTGYHSFTQMQQQQNGIGPVTDASMF SSRVSASSIGNYQGQHAMGHTTNFYSSSQHDSPLVLSDPNLELANNGHESLWNGVMKP DEGTVQMTHLQPPVHPEQGMFTTEGQGVEYLTFDEVYSDGLSLKDIGAAGADVEPFWQ LSSATADISATENSVQQNDGSLGAAIGFPFLKTQSSNLSDILKDSFKKSDSFTRWMSK ELLDVEDSQIQSSSGAYWNTEEADSIIEASSREPLDQFTVAPMVLQDQLFSIVDFSPS WTYAGSKTKVLVTGRFLHANEVTERCKWSCMFGEVEIQAEISADGTLRCYSPPHKPGR VPFYVTCSNRLACSEVREFEFRPSDSQYMDAPSPLGATNKVYFQIRLDNLLSLGPDVY QATITNPSKEMIDLSKKISSLLANNDEWSKLLKLADDNEPLSHDQQDQYAENLIKEKL HVWLLHKVGDGGKGPSVLDDEGLGVLHLAAALGYDWAIRPTVTAGVNINFRDFHGWTA LHWAAFCGRERTVVALIALGAAPGALTDPHPNYPAESTPADLASANGHKGISGFLAES SLTSHLQALNLKEANMSEISGLPGIGDVTERNASQPAIGDSLGAVRNAAQAAARIYQV FRVQSFQRKQAVQYEGDKGGISDEHALSLLSMKPSKSGQLDPLHAAASRIQNKYRGWK GRKEFLLFRQRIVKIQAHVRGHQVRKHYRKIVWSVGIVEKVILRWRRRRAGLRGFRPT EGAIESSSGGTSSNLVKDKPAGDDYDFLQEGRKQTEERLQKALARVKSMVQYPEARDQ YQRILNVVSKMQESQTVQEKILDESTEMDEGDFMSEFKELWDDDTPLPGYF</aaseq>

Gene Sequence

<dnaseqindica>187..235#994..1113#2010..2125#2197..2285#2485..2527#3368..3512#3641..3760#3839..4158#4369..4743#4848..5542#5636..6179#6410..6754#6871..6981#accccgaaaaatcccccacaaaaaaaagaaaaaaaaacccaaaccccctcgcgcggaggccgagagagatcccccgctccgctccgatccccaggcgtgcgcgcgtgcggggctcgccgcgcgtcgcatggtggcggcgcggccgccggagcacacgcctcggcctcgataccccccaccacagccatggcggcggcggcggacgcgcggcgcttcgcggtcgtgccgcagctaggtgagcataacacgcgcggggtttgggcggagagccgcggctgcgtcgccgtcgctctggtccggatgggggcacgccgcgcgtgtcgcgcgggggtgctttgtcggctcgttccgatctggtgtggtggatggatcatggatggacaggggagggggggtcgtcgttggtcgcggtcaacgcgccggtcgtggttacctcgcggctattgcttgggggggggggggggtgggggtagcggagggattggtagagctgtagtggattttttttttgttttgtttggcgttgtggaagatttttcgttcgattctgctgcttcgagtgttggtgtagatcgggctcctacggattggtttcatttctcggtgatagtctctctgtttttttagtccattgctccagtgattattactgttctagtaaatgaaatgcggtgtcgttgcatttagcgttgaatggagtaagtattgggctggattttggagcttggactgcagcgcgcacaatttagtttcgtgcgtagagcagttggttgtactactttttttggttcagtcatgcttttgttcccctttcgaaacgaggggatcatgttggccggcctgcagttctccacttgtgtggacaagagtgttagtagtatcggttggttctgaaagagaattttgttatgtgatgatgctgtctatgattttttttttttgagaaatatggtgcactgtttaactgtcgctgactctgtgatctataaacagatattgcgcagatactgaaggaggctcaacaacgatggttgcgtcctgctgaaatttgcgaaatacttaaaaactacaaaagtttccgtattgcaccagaaccaccaaacaggcctcaaagtaggatacttgtctccttaattaaatgttgctctaatttgttgtgcttttgtattgaggttatttttatcggtgaatcatcataattaaaaataatcatttgaaaaaaatactaggagaaacatgaaatttgattgcatgctaatttgtgaaaatatctttaaccttaataatatgaagttctgaacttctatcttatagctgcctgcatgtattatggtagttttagcttgttatttaccttttgtgccacgttgtattcctgtttaatttctgtgtgcatcataagtaaataaaacatactacctccgttttttttatgtatgacgccgttgacttttcacataatgtttgaccattcatcattttcaaaaatttagtataaatatgtagaagtataagttaagattatagtttctttgatggtaaaacaagtcacaacaaaataaatgacatttatatatatatatttttgaataagacaaaggatcaaacgtcacgtcaaaagccaacaacatcatagatcaaacattaaaaaacggaggtagtaatatttattactgggctccttatgactgttacaatggaacacttgtcaggctgcattagtgaggtatcaatatgcatttcttttaccatcaaagagttattctattctcttgactttgatgcctttccttcatgaaaaaaaatactgtattgcacataaaacaagatgtactggtatgtgaatttaaaaatctactttttattgacctgatcgtttagttgcaacactagtaaacagttcacttttcttacattaccaattaccattgcatgcatgtaattgaagttgataaagtgcctataccatcctcaagttcaatatttctgatcattcttgccctgcctaggtggctcgcttttcctatttgatcggaaagtattgagatactttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaagcacatgaaaggctgaaagtaagtcactttgcgttatgtagtgattatttatcaatgtgaataagactcactgttgtttgccaatccagtctggaagtattgatgtgcttcactgctactatgcacatggagaagagaatgagaacttccaaaggaggacttactggatgttggaagagtaagccgaattcttccaaaaatattacatgttcgtttatgttattagcaatgctataattgttctgagcctatgaggctatgaacacaaattctttatcagaggcgcataaatgaacacacttgcatgtagagtttgcatacagaattttagttatttgcatttggataaccttatagagttacccttgcttttgcagggattttatgcacattgttcttgtacattatcttgagaccaaggtattactgaactctcctatctttcacttaatgattagcttatatctaccttaatctacattccatctttcggtatccaaaagttacatgcattgtttagcgccataatgtttgattcctttttctggcgctttcattttttttattgtggactttatttattttaattttttattgaccaaatactagtactatattgcaccactgtgctacgaaattgtagtactatgattatttagttttgatgattgatattcacataatttgggatatcacttatgtatgctttcgtgcttgctagcaatctttacatgcatttttcagaaatacacatttttcctttgtatttgtacttaaggtggtgcttgttacgtgtaatgatttttgaattaattatatgtcagctaccaattccacgatacagaaaacagcggtatgataccaactctaggagttacatgatattgacctgacttaatgtaagtctcatattaagaattagataaatattaggtgttaacatctgattttttttgtagtatcattatataatgataatgaatatgtcttaaaaattagacggaacagtgtgtaatttttttcatttgtatagttggaactagttttagaaacagagtgctattattttctgatttatctgcttagtgaattttcattcatttccatttccatttctgtagttcaagtcagttttcttatttcacattgtgaatagaattcctcattgcctgttgaagagagctttttcctctcttgttttgctcttgtaagaagtcacttaaccctcattgcatcgtgctatgcgactatgaacttcagggtgggaaatctcgtactaggggcaacaatgacatgcatcaagcagctgttatggatagtccattaagtcaattaccttcacaaactatagatggtgaaagctcacttagtggacagttctctgaatatgaagaggcagaatcaggtaaaaatgttggctgtcttcttcggttatctataatgataatgaaaatactacacagaaaaaaatagtttcactgatacatattccaactatgcacagcgtatctaaagcaaaattcggtgcagcagatgtttattcaggaggaaccggataccactctttcactcagatgcagcagcagcaaaatggaattggacctgtgactgatgcttctatgttcagttctcgtgtttctgcttcatccataggtaattaacaagagaaatacgcatgtggtttgaacctaagtgaagtcgatattaacttcttttgtcacatgatttcaggtaattatcagggacaacatgctatgggacatacaacaaacttctattctagtagtcaacatgattcacctcttgttctcagtgatccaaaccttgaacttgcaaataatggacatgagtcattgtggaatggggttatgaaacctgatgaagggactgttcaaatgactcatctacaacctcctgttcatcctgagcaaggcatgttcaccacagaaggccaaggggttgaatatttgacattcgatgaagtatattctgatggactcagtctgaaggatataggtgctgcaggtgctgatgtagaaccattctggcaggtatgtgcaagttttgtaatagatgctaaaatattgtcctgttgtaaagttaatagttgctctcatatggtaattcttccccatattgtgcgctaaaaatcaaagtttcaactctcatatggtaattcttccctatattggcgctcttggtgcttttgtctggtttagttttcttcaaacagctatctaacagaagccattgcatttcagctctctagtgctactgctgatatatctgcaacagagaacagcgtccaacaaaatgatggatctctaggggcagctattggcttcccatttttgaaaactcagtcatccaatctatctgacatcctgaaagacagctttaagaaatctgacagttttacaagatggatgagcaaagagcttcttgatgttgaggattcgcaaattcagtctagctcaggggcatactggaacactgaagaggcagatagtatcatcgaagcatcaagccgtgagccactggatcagttcaccgtggcccctatggttttgcaagaccagctattcagtatagttgatttttcgccaagctggacatatgcaggctcgaagaccaaggtatagttttctgatggtgaaacttttcagctttttttttttgttgaaattccagctaaaatagtgttctccaggtgctcacaaatatgttgtatgcaatgtaggttttagttactggtagattcttacatgctaatgaagtcacggagagatgcaagtggtcatgcatgtttggagaagttgaaattcaagcggagatttcagcagatgggactcttcgatgttattctcccccgcataaaccaggcagagtccctttctatgtcacctgttccaacaggttagcctgtagtgaagtacgtgagtttgaatttcgaccaagtgactctcaatacatggatgctcctagcccgcttggtgcaaccaacaaagtttatttccagatacgtcttgacaacctattgtccctggggccagatgtgtaccaagctactataactaaccccagtaaggagatgatcgacttgagcaagaagattagttcactgttggcaaacaatgatgagtggtccaagttacttaaattggctgatgataatgagcctcttagccatgatcagcaggatcagtatgctgaaaacttaattaaggaaaaattgcatgtctggcttctccataaagtaggcgatggtggcaaaggacccagtgtgttagatgatgaggggctgggtgttcttcatcttgcagctgcccttggttatgattgggccataaggccaactgttactgctggtgtgaacataaatttcagagattttcatggatggactgcattacattgggctgcattttgtggcaggtaagtgactaaaatggtgaattaggctaagagtatgttttttctttaatttttgaatattggacagtaaatactctttgatctatgttgcagagaacggactgtagtagcacttattgcactgggagcagctcctggagctttgacagatccacatcctaattaccctgctgaaagcacaccagcagaccttgcatctgctaacggacataagggcatctctggtttcctggcagagtcctctctgacaagtcatcttcaagccctcaatctgaaggaagccaatatgtctgaaatatctggtctacctggtattggagatgtaactgagagaaatgcatctcagcctgcaattggagattccttaggtgctgttcgaaatgccgctcaagctgctgctcgaatatatcaagttttcagggtgcaatccttccagaggaaacaagcggtccaatatgagggtgacaaaggtggcatatcggacgaacacgcactttcactcctgtctatgaagccatccaagtcaggccagcttgatcccctgcatgctgcagcatctcgtatacaaaataaatataggggatggaaggggagaaaggaatttcttctcttcagacaacgaattgtgaagatccaggtactgtatattatatatattgaaatccaacagataatttagtttcccatatttctcaatagttgcattgctcttatcaaaattttgtttgtctgccactgggaatattaatgaacacctggatggatattaagatcaagagtactatagtgggataatctttgttttaccgtctaatccgtcattggctaatgctgatatatatgtatatatatctttttgctggctaggctcatgtgcgaggccaccaggtgaggaagcattatcggaaaatagtttggtctgttgggatagtggagaaagttatattgcgctggaggcgaagaagggctgggttacgtggttttaggcctacagaaggtgcaatagagagcagcagtggtggcacaagtagcaatttggtcaaagataaacctgctggagatgattatgatttcttgcaagaaggacggaagcaaactgaagaaaggctgcagaaagctcttgccagagtgaagtccatggttcaatacccagaagcaagggatcagtaccaaaggattttgaatgttgtttcgaaaatgcaagagtctcaggtaatgtcctggttccctataaacaagtagcattaagcgttgctgttatgtcttactctgcaacttttatccaaatggaacacttacgccgtttgtccctgctgatatgacgacagaccgtgcaagaaaagattttagacgaatcaaccgagatggatgaaggtgatttcatgagtgaattcaaggagctgtgggatgatgatacaccactccctggttatttctagtgttctagactaactggtggtgtctctgtaaatctcttctcttcagttctgctgaattgacacctgccgataacccaaactctcaacatagcatgaatagcatgatcttaaaatcttgaatgcttggatttggattcagttgtggtattcttgcttttatgttatagcgttatgtacagtagaatcttattttatcattgaaggagccatgtatatgcagtatgaaactaatgcagaaagttggtggttgtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0375600, RefSeq:Os10g0375600