Difference between revisions of "Os10g0422500"

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(Created page with "{{JaponicaGene| GeneName = Os10g0422500| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001071165.1 GI:115482073 GeneID:4348658|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0422500|
 
GeneName = Os10g0422500|

Revision as of 21:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0422500

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001071165.1 GI:115482073 GeneID:4348658

Length

4730 bp

Definition

Oryza sativa Japonica Group Os10g0422500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15401477..15406206

Sequence Coding Region

15401815..15401841,15401993..15402092,15402454..15402531,15402718..15402805,15402914..15403018
,15403376..15403918,15404071..15404206,15404345..15404535,15404634..15404742
,15404956..15405104,15405178..15405424

Expression

GEO Profiles:Os10g0422500

Genome Context

<gbrowseImage1> name=NC_008403:15401477..15406206 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15401477..15406206 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagatggcgccaagaagagcaagctgtcatggtccaagagccttgtgctgaagtggttcaacatcagggggaagtcctatgacttccatggcgatgatgcagctgctgcatttgggaggagaggaggaggaggagaggatgagtggaggagcagcagcttttccaggagggaatcctgcacggtcaagaagagcaggacagagagggcgtcgcggcggagccacgagcggtctcgccggagcaagatcgacctcgacgctgcggaggccaccgtcacgttggactacaggatcttcgttgccacgtggaacgtgggcggccgcgcgccgccggggtcgctgagcctcgacgactggctccgcacctcgccgccggccgacatctacgtcctcgggttccaggagatcgtgccgttgaacgccggcaacgtgctcggcgcggaggacaatggcccggcgaggaagtgggtgtcgctggtgcggcggacgctgaacagcctcgcgggcacgggcggtggcggcggaggcggaggtggcgggggcatgaggacgccgtcgccggcgccggacccggtggtggagatggacgacgacttcgaggggtcgtcgtcgaggcagaacaacccggcggcgttcttccaccgccgctcgttcaacgccgggctcagccggagcctccggatggacggcgacatcctcggcggcggcggcggcgcgcagccgaggctggagcgccggtacagcgtcaacgaccgcgtcatgtacggcagccggccgagcgactacgaggccaactgccggtggggccacccgtcggacgacggcgagatcgacgacggcggcggcgagtcgccaagcgcggtgttctcgccgatgtcgtacggatacggcgcgccgccgtacatggaagagagcaatggcggcgccgcccattctaggtactgcttggttgcgagcaagcaaatggttggattgttcctgatggtttgggctaggagagaaataaaaagtgacataagaaatctcaaggtgtcttgtgtagggagaggattgatgggctatcttggaaataagggttcgatttcggttagcatgttgttgcaccaaacaagcttctgcttcgtctgtagtcacctcacatcggggcagaaggatggtgatgagcaccgcagaaactccgatgtgatggaaattttgagaaaaaccaggttcccaatggtttatggacagtatgagagatcaccagagactattttggagcatgatcggatcatttggcttggggacctaaattatcggatagcgctttcctaccgatcggtgaaggctcttgtggagatgcgcaattggaaagcattgcttgagaaagatcagctgaggagcgagcaaagaggcggccgcgtatttcctggttggaatgaggggaggatatattttcctcctacttacaaatactcaaataattccgacagatatgcaggggatgacatgaaccagaaagaaaagaggagaactccagcatggtgcgaccgcattttatggtatggaaggggtcttagccaactctcatatgttcgaggagagtcccgcttctcagatcataggcctgtctacagcatgtttagtgcagaagtagaatcgatcaatcacagccgaattcagaaaatgagttgttcaagctcgcaattggacatcgaagaattgctgccctactcatatggttacaccgatatcaacccatatggatacaccgacctcaacttctattga</cdnaseq>

Protein Sequence

<aaseq>MRDGAKKSKLSWSKSLVLKWFNIRGKSYDFHGDDAAAAFGRRGG GGEDEWRSSSFSRRESCTVKKSRTERASRRSHERSRRSKIDLDAAEATVTLDYRIFVA TWNVGGRAPPGSLSLDDWLRTSPPADIYVLGFQEIVPLNAGNVLGAEDNGPARKWVSL VRRTLNSLAGTGGGGGGGGGGGMRTPSPAPDPVVEMDDDFEGSSSRQNNPAAFFHRRS FNAGLSRSLRMDGDILGGGGGAQPRLERRYSVNDRVMYGSRPSDYEANCRWGHPSDDG EIDDGGGESPSAVFSPMSYGYGAPPYMEESNGGAAHSRYCLVASKQMVGLFLMVWARR EIKSDIRNLKVSCVGRGLMGYLGNKGSISVSMLLHQTSFCFVCSHLTSGQKDGDEHRR NSDVMEILRKTRFPMVYGQYERSPETILEHDRIIWLGDLNYRIALSYRSVKALVEMRN WKALLEKDQLRSEQRGGRVFPGWNEGRIYFPPTYKYSNNSDRYAGDDMNQKEKRRTPA WCDRILWYGRGLSQLSYVRGESRFSDHRPVYSMFSAEVESINHSRIQKMSCSSSQLDI EELLPYSYGYTDINPYGYTDLNFY</aaseq>

Gene Sequence

<dnaseqindica>339..365#517..616#978..1055#1242..1329#1438..1542#1900..2442#2595..2730#2869..3059#3158..3266#3480..3628#3702..3948#atcttcctccccaataacaaaatctttctttggccagcccaaacagctcttgctgcagtcactctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctatctgctctgcacttttccatcaaatcacaacctctgtgcacagaaagacaaacagtgcccctgcttgtctctgcctcaccttgacctgtggcgccatctcttgcaacagcagcgtcgtggctgagcagagaagcatccgtctctctttggcttgtcctggcctgcctgcctgcctgcatgagtgcttgcctgcctctcccctgaggaacaatgagagatggcgccaagaagagcaaggtgagtttctttgctgttgttaattcttgctttctctgatgatctgatcttcagacattgcaaagaggcagattttcttgtttttttttggtaccaaatcttctccaacttcttgttgttgttgttgatgatgatgatgatgctgatgcagctgtcatggtccaagagccttgtgctgaagtggttcaacatcagggggaagtcctatgacttccatggcgatgatgcagctgctgcatttgggaggagaggtgagtgagtgagtgagcctgatgaactctgaacagtagctagccacgcccctctctctctcactgacagagtgtgtctagctgtggggcccacactgccacccccatgggccatggctactactactactccaactctcctacctcctgtctgcctcttggagatcagatcactcttttgttttgttttcttgcactgctgctgctgctggtcaaaggacccagctttttcagttcttttttctttcttttgggttggtttgtgatggatggcatggtgatccaaatttgctgagacattcgggcattttgattgtttttttttgttctctgatgatgagaataatctgaactggagcaggaggaggaggagaggatgagtggaggagcagcagcttttccaggagggaatcctgcacggtcaagaagagcaggacaggtgattctattctagtaccaatctgaccgaatttttttattttttttaaaaaattcgagttttcatatgattctggttcaattggtacctagagtctgcaagtgcacgagaaagaagaaaagaaaacccccagatttttatatgattatgattgaagaaaaaaaaaataatttcgaattgttgcagagagggcgtcgcggcggagccacgagcggtctcgccggagcaagatcgacctcgacgctgcggaggccaccgtcacgttggactacaggtgcgcgtgtgtgcatatctccggcgatcgccgccattgctgctgcaccgatctccattgatccgtaacaatgtcgtcgtcgtcctcgttgtttcttgcgttatgtaggatcttcgttgccacgtggaacgtgggcggccgcgcgccgccggggtcgctgagcctcgacgactggctccgcacctcgccgccggccgacatctacgtcctcgggtacgtacacgccgccgcctctcgccattgccgttgaaacgtagcgttggaatataaactgaattgctcgtttttttctcatcagtttaagtttttgaattgaactagtgagtgtatacaacttacagtctcatcttttagcttatgctgattttgaagttttttttatcgtagtttattttttatccttcgcttttagatcgctaataacacgtatataaaaattttatttacaaattattttacgttaataaatatatcatttcgcttaatctgtcaataagttaaacgatggcctccttaatatggtcagagcttggattgaactggtcgataaatgcaactcaatacgtgtaggttccaggagatcgtgccgttgaacgccggcaacgtgctcggcgcggaggacaatggcccggcgaggaagtgggtgtcgctggtgcggcggacgctgaacagcctcgcgggcacgggcggtggcggcggaggcggaggtggcgggggcatgaggacgccgtcgccggcgccggacccggtggtggagatggacgacgacttcgaggggtcgtcgtcgaggcagaacaacccggcggcgttcttccaccgccgctcgttcaacgccgggctcagccggagcctccggatggacggcgacatcctcggcggcggcggcggcgcgcagccgaggctggagcgccggtacagcgtcaacgaccgcgtcatgtacggcagccggccgagcgactacgaggccaactgccggtggggccacccgtcggacgacggcgagatcgacgacggcggcggcgagtcgccaagcgcggtgttctcgccgatgtcgtacggatacggcgcgccgccgtacatggaagagagcaatggcggcgccgcccattctaggtgaccaccatttcttggctttggatcttgaaatttcagcctttcatcaggataattaagcttgatttcatggaattatcccgaatttacagtagttttgatgagatttaattaggatttttattttctaaataaaatttgaggtgatttaggtactgcttggttgcgagcaagcaaatggttggattgttcctgatggtttgggctaggagagaaataaaaagtgacataagaaatctcaaggtgtcttgtgtagggagaggattgatgggctatcttggaaataaggtaacttatgttaaaataatctgttgtgatttttggtgttatattcctatcttattgccattattgaatttgaagaaaaaagagtaagaaattgtgtttcagaagctttgtaaaccaatgagaagttttttttcccagggttcgatttcggttagcatgttgttgcaccaaacaagcttctgcttcgtctgtagtcacctcacatcggggcagaaggatggtgatgagcaccgcagaaactccgatgtgatggaaattttgagaaaaaccaggttcccaatggtttatggacagtatgagagatcaccagagactattttggagcatgagtaagcaaaacaccttagcatccctcaactcttgtaaattaaaaacttgcaatcacaaatattgtgtaatatatccttcaccttcgccattttcttagtcggatcatttggcttggggacctaaattatcggatagcgctttcctaccgatcggtgaaggctcttgtggagatgcgcaattggaaagcattgcttgagaaagatcaggtatgagcttagcaacaaactttgaaagacacaatgcagatctccaatagtggtaaaattcttccaatagtagtttgcttgtgacagaggcaatcattgctttatatcctgtcattcttttgctttggtgacgttacaagacttcattagtttggcaaaacagaaggccaagaataattgtgatgagaaggcatgaattgcttatactttcagctgaggagcgagcaaagaggcggccgcgtatttcctggttggaatgaggggaggatatattttcctcctacttacaaatactcaaataattccgacagatatgcaggggatgacatgaaccagaaagaaaagaggagaactccagcatggtaagtaaagcacattgccagatttttgccatatttcgtacagttcagcaatttcagtgatcttgttttacaggtgcgaccgcattttatggtatggaaggggtcttagccaactctcatatgttcgaggagagtcccgcttctcagatcataggcctgtctacagcatgtttagtgcagaagtagaatcgatcaatcacagccgaattcagaaaatgagttgttcaagctcgcaattggacatcgaagaattgctgccctactcatatggttacaccgatatcaacccatatggatacaccgacctcaacttctattgaaatgggctcaaaaggtttagcttcatcatgagttctctgagtcttagaagcatcaggaaatttatttccagtcctgctctgaaacacctatagttagctttgtcaattctctgtcaacaacggacagtgttgatagacctgaagacctgaaccgaactaaggttctccttccgatgaactggtgagctgcatttgcacatcgtagttatgaaagtttttttgtgtagacagctcacatgagttcagaaaaataccatatgatgttcatattcagtcatcttcagaagttctctgaatgttcagatagatgccaagatcctttttcctatccagacaaggtacatacctggtccatgtacatcatttgcatgtggtgaacaaggaacctgatgatcaaatatatggactttttacaggtaccatccattaactaattagtagaagagattttccactgactccacaaaagaaaaaggaaaacaactacaagactaacatcaagagaagcattgctcatatgatgagcaagatagtactggccattcaaatctgaagctcagatgactttggccaaagcaaagagatgcatgccagacaacaacagcagcaagcgtgcatcagtttatttttcttcacccccctgtacattgtaggccaatttctttcattctctttggttgctttgacaatgtaaacgatcgaaaaacgacaagtgtcggtctgtacaactcttgtgttcttggcttttgaaagctgaaaaaaaagggtcaatgaatgcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0422500, RefSeq:Os10g0422500