Difference between revisions of "Os10g0438000"

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(Created page with "{{JaponicaGene| GeneName = Os10g0438000| Description = BTB domain containing protein| Version = NM_001189246.1 GI:297727622 GeneID:9270558| Length = 2715 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0438000|
 
GeneName = Os10g0438000|

Revision as of 21:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0438000

Description

BTB domain containing protein

Version

NM_001189246.1 GI:297727622 GeneID:9270558

Length

2715 bp

Definition

Oryza sativa Japonica Group Os10g0438000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16147437..16150151

Sequence Coding Region

16147437..16147490,16147753..16147833,16148089..16148148,16148598..16148656,16148790..16148863
,16148973..16149019,16149230..16149313,16149429..16149590,16149705..16149845
,16149919..16150025,16150124..16150151

Expression

GEO Profiles:Os10g0438000

Genome Context

<gbrowseImage1> name=NC_008403:16147437..16150151 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16147437..16150151 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagccgccgatcctcctcaacatcgggggcagcaggtacgagacgacggcggacacgctcacgcagcgggatcccgggtcgctcctcgccgccgcgctctccggcgccgccgcccacggcctccccaccaccgaggatggggccgtgttcgtggaccgcgacggggagctgttccggcacgtgctcaactggctcagggacggcgccgtccccgcgctcgccgacgccgagtaccggcagctgctgcgggaggcggagtactaccggcttcctggattgatcgattgcataagtgaaaggattgaggattgggatgataagattggaagatcttcagaggccgagctgactcgcaaggacgtgatcaagtgcatccaggctgataaagtccggttccgaggcgtcaacctttctggccttgacctgtccaagcttgacttatcggaagttgatttcagttgcgggtgtattgaggagacaaaattttcccttgccaatctttacaaagctaaatttcgggaggttcaagcttctcgatcttcgttcaattatgctaatttgcgtgagtgtgagtttgtaggagcaaatctccaagagtctactttggacagagccaacctacaaagtgcaaacctgcaagatgcatgcttggtaaaatgtagcttcattgaaacagatcttcgttcagcacatctgcagagggcagaccttacaggtgccaatttgacaggagctaaccttgaaggagccaatctgaagggagctaaattgtctggttcaaacttgcaaggtgcaaatcttcagcgagcttacctgcgggaagttgatttacgtgaaactcaattaactggtgctaagctcggtggtgcaaatctgcttggagctatcagatag</cdnaseq>

Protein Sequence

<aaseq>MQPPILLNIGGSRYETTADTLTQRDPGSLLAAALSGAAAHGLPT TEDGAVFVDRDGELFRHVLNWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERI EDWDDKIGRSSEAELTRKDVIKCIQADKVRFRGVNLSGLDLSKLDLSEVDFSCGCIEE TKFSLANLYKAKFREVQASRSSFNYANLRECEFVGANLQESTLDRANLQSANLQDACL VKCSFIETDLRSAHLQRADLTGANLTGANLEGANLKGAKLSGSNLQGANLQRAYLREV DLRETQLTGAKLGGANLLGAIR</aaseq>

Gene Sequence

<dnaseqindica>2662..2715#2319..2399#2004..2063#1496..1554#1289..1362#1133..1179#839..922#562..723#307..447#127..233#1..28#atgcagccgccgatcctcctcaacatcggtccgccgcctcttccaccacccgtagcatatccgtttctgctcgattcgatccaaaaattggtctcaccccctcacgcgagcccgccgccgatgcagggggcagcaggtacgagacgacggcggacacgctcacgcagcgggatcccgggtcgctcctcgccgccgcgctctccggcgccgccgcccacggcctccccaccaccgtacgccgctcgcccctcgctgccggttgtggtttgattctcctaatctcctcggctgacctcgtcgctgcaggaggatggggccgtgttcgtggaccgcgacggggagctgttccggcacgtgctcaactggctcagggacggcgccgtccccgcgctcgccgacgccgagtaccggcagctgctgcgggaggcggagtactaccggcttcctgtatatgagcaatgcctcctgccaccctggttgtgtgtgtggggggattttgaccccaatgctgtgtgagaacctgacattgattttttggtttggtctgatttgatcctctagggattgatcgattgcataagtgaaaggattgaggattgggatgataagattggaagatcttcagaggccgagctgactcgcaaggacgtgatcaagtgcatccaggctgataaagtccggttccgaggcgtcaacctttctggccttgacctgtccaagcttgtaagctcttgggaaagctcacttgtgtagtttgccatccattgttactgaaatgcttcttgtaaacttgcggtgaacttgtttgtatgtgccttgttttccctatgttctgcaggacttatcggaagttgatttcagttgcgggtgtattgaggagacaaaattttcccttgccaatctttacaaagctaaatttcgggtacagaacttgtagtgtgatatcattctgcttattgcatatgtgttaattgatgaattgcctatttggatttttacatctcatttatttatatatttcaactcagtgttaattgatgaatttcctattgtgtttttgcttcaactgagaaatactgaaaattggtaatgtgtggaattcggttgtgaaacacctatgtattctttgcaggaggttcaagcttctcgatcttcgttcaattatgctaatttgcgtgagtaagaagatttcagagtcgcctttcccttcagtttctcttctcctttagctagttcatgttttggactttggaggttctgttagtaattacaaaatatgaaattgcaggtgtgagtttgtaggagcaaatctccaagagtctactttggacagagccaacctacaaagtgcaaacctgcaaggtacttgaccttctattcttttcacattttacttgatcacagattattctgcttgaacctgcatagttttccttttctctgcaaaatataaacaaatgagtagttgcaataaattcttcagcctattctgcagatgcatgcttggtaaaatgtagcttcattgaaacagatcttcgttcagcacatctgcaggtttggaaataaaaaattgtgttcagtactccatattgctgcgtatttctgctatatgctaactgaaattctgttccattaattattatgtgcaaggacactgctgccaatttcttataatataggaaactgtttttttttatgatgatgaacctgaagccaaaaaacattaacatttacgatatatagtctttcttttgttctctagttctgtagcatctaatattctaatatatcatcttgcatgctggatccatgccaatcattttttatgtgtagcaccatataggcacatacctttttccccgtagcgtcactttgcagagaaaccgtatgtgaacttatttgtacctacaatacacatattataataagttgaatgctgtttgattctcatggatcagttttaacaccaattgttcaatacttcaatttacatggattttcagagggcagaccttacaggtgccaatttgacaggagctaaccttgaaggagccaatctgaaggtaaaaattgtacattgcgaatttgtgatgcatttattcccaggataagctgataatcttttgtgttactaatctagaatggttccttcagtaagatttgacaatgtccaataacctctgtaccaattcaggcatactatctctcatgttgtgcatcatggaaactgaagatatactaaaagtttttattgtctcttccaacaattgccatttagacgagacaaatctaaattagtatccttttcactttttcagggagctaaattgtctggttcaaacttgcaaggtgcaaatcttcagcgagcttacctgcgggaagttgatttacgtgaaactgtatgtctacttcctatcactccacttcatggcagccagttatctatttctgtttcacatatgaatgcacaggaaagtcgcatctagtaggataaaagtgcacaacctcaataattctgtgtaccttcttcccctaggtttagatcatgcaactgcaagatgcaatttacttgatatggatctaacgtgggaatgtggcatcataggttctagtagttcaagattgttttctaaaatttaatccatgtgttcttttgagcagcaattaactggtgctaagctcggtggtgcaaatctgcttggagctatcagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0438000, RefSeq:Os10g0438000