Difference between revisions of "Os10g0457932"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0457932| Description = Similar to DNA repair and recombination protein PIF1, mitochondrial precursor| Version = NM_001189259.1 GI:297727648 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0457932|
 
GeneName = Os10g0457932|

Revision as of 21:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0457932

Description

Similar to DNA repair and recombination protein PIF1, mitochondrial precursor

Version

NM_001189259.1 GI:297727648 GeneID:9266776

Length

2126 bp

Definition

Oryza sativa Japonica Group Os10g0457932, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17263098..17265223

Sequence Coding Region

17263098..17264596,17264626..17265223

Expression

GEO Profiles:Os10g0457932

Genome Context

<gbrowseImage1> name=NC_008403:17263098..17265223 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17263098..17265223 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaacgaacaaaaggcatgaagatgccagagaattaacatattcagaatttcctacaaaatggacgtgggataagaatgtgaagaaatgggtaaggcgaaaaggagggatgaaaattggcaggatctacaatgcccatccagcaagtggagaaaggtattatctcagagttatcctcaacacggcaaagggttgcacaacatttgaagatatcaggactgtaaatggaaccgtgcactcatcatacaaatcagcatgccatgcactaggatttctaaacgatgatagcgaatggattgagtgcatcaaggaagcatcatgctgggcatctgggatgaaattacgacaattatttgcaactgttttatgccattgcgaggttactgacccaaagaggttgtgggaatccagctgggagaaactctccaaagatatacagcacacacaaagttgggcattgaactttcccacctcctgcctcacgccttcacacagaaggaaatgtgctttaatagaaattgagaagaacatgcgacaagctggaaaatcactaaaggaatacgctggaatagaaccgccaaatatggcaaagttaaagatgaactatgacaaagagaagttgaagcacgagcacctgcaaatactaaacactctgaacatagagcagaaaaaggcatttgatgcaataatagaatcagcacatcaatcactaggcaagctaatatttgtggatggttatggtgggacaggcaagacatacctttggaaagcaatcacaacaaggttaagatcagagggaaagatagtgcttgcagttgcgtctagtggcgttgcggcacttctacttcaaggaggtagaacagcacattcagcattcaatatcccgatcaacctaacagatgaatatacatgcttcatcaaacaaggctcgcacatagctgatctattaatgaagacatcactaatactgtgggatgaagctccaatggcaaacagaaactgtttcgaggcactagacaagagcctaagggacgtgcagaggtgtagaaatgagaatagttgtcaaaagccctttggtggcatgacagttgttctaggaggggacttcaggcagatcctccctattgtgccaaaaggaagaagggaacacactgtaaatgcaacgatcaaatgctcatacctctggcaacatttcgaggtgttcaatttgacaaaaaatatgcgactcaattatgtgtccaaagatcaaacagagcatcagaagtctgcagaattcgctgagtggatactacaaatcggcaatggtgacacgatttcgttagatgaaaaaggttgggtgaggatgcctagtgacctgctgttacaaaagggagatgacccgaaagctcaaatcattgagagtacctatcctgacctacaagacaattgctgcaagcagaattatctagaagaaagagcaatattgtgtccagtgaatgagaatgtcaatgagcttaatgagtatattatggaccagatccaaggtgacaaggtaacctaccttagccgtgacagtgtgagcaaatcagtgtcttacagccatgagatggaaatgttatatcctacggagtttctaaacagcttgaatcactccggaattccaaaccaccaactgaagctcaaagtcggtttgccagtgatgcttcttcgtaacatcaaccaaagtgcagggctatgcaacggcactagaatgacaattacgcgactaggcaataaggttattgaggcacagattataactggaacacacagcggcgatatggtatgtatcccacaaatcatcatgtcaccaaccgaaccgaaatggccgttcatgctaaacagaaagcaatttcccctctcggtgtgttttgccatgacgatcaacaagagtcaggggcaaactctaaacaaggtcggcctctatttacctaggcaagttttcacccacgggcagctctatgtggcagtctccagagtcacaagcagagatggcctgaagatcttgatcgccgacgaagaatgcccgggtgaaggaatggtgaaaaacatagtgtacaaagagatcctccagtaa</cdnaseq>

Protein Sequence

<aaseq>METNKRHEDARELTYSEFPTKWTWDKNVKKWVRRKGGMKIGRIY NAHPASGERYYLRVILNTAKGCTTFEDIRTVNGTVHSSYKSACHALGFLNDDSEWIEC IKEASCWASGMKLRQLFATVLCHCEVTDPKRLWESSWEKLSKDIQHTQSWALNFPTSC LTPSHRRKCALIEIEKNMRQAGKSLKEYAGIEPPNMAKLKMNYDKEKLKHEHLQILNT LNIEQKKAFDAIIESAHQSLGKLIFVDGYGGTGKTYLWKAITTRLRSEGKIVLAVASS GVAALLLQGGRTAHSAFNIPINLTDEYTCFIKQGSHIADLLMKTSLILWDEAPMANRN CFEALDKSLRDVQRCRNENSCQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNATIKC SYLWQHFEVFNLTKNMRLNYVSKDQTEHQKSAEFAEWILQIGNGDTISLDEKGWVRMP SDLLLQKGDDPKAQIIESTYPDLQDNCCKQNYLEERAILCPVNENVNELNEYIMDQIQ GDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNSLNHSGIPNHQLKLKVGLPVMLLRNI NQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDMVCIPQIIMSPTEPKWPFMLNRKQ FPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKILIADEEC PGEGMVKNIVYKEILQ</aaseq>

Gene Sequence

<dnaseqindica>628..2126#1..598#atggaaacgaacaaaaggcatgaagatgccagagaattaacatattcagaatttcctacaaaatggacgtgggataagaatgtgaagaaatgggtaaggcgaaaaggagggatgaaaattggcaggatctacaatgcccatccagcaagtggagaaaggtattatctcagagttatcctcaacacggcaaagggttgcacaacatttgaagatatcaggactgtaaatggaaccgtgcactcatcatacaaatcagcatgccatgcactaggatttctaaacgatgatagcgaatggattgagtgcatcaaggaagcatcatgctgggcatctgggatgaaattacgacaattatttgcaactgttttatgccattgcgaggttactgacccaaagaggttgtgggaatccagctgggagaaactctccaaagatatacagcacacacaaagttgggcattgaactttcccacctcctgcctcacgccttcacacagaaggaaatgtgctttaatagaaattgagaagaacatgcgacaagctggaaaatcactaaaggaatacgctggaatagaaccgccaaatatggcaaagttaagtgaaattgagaacagtttataattgaagagatgaactatgacaaagagaagttgaagcacgagcacctgcaaatactaaacactctgaacatagagcagaaaaaggcatttgatgcaataatagaatcagcacatcaatcactaggcaagctaatatttgtggatggttatggtgggacaggcaagacatacctttggaaagcaatcacaacaaggttaagatcagagggaaagatagtgcttgcagttgcgtctagtggcgttgcggcacttctacttcaaggaggtagaacagcacattcagcattcaatatcccgatcaacctaacagatgaatatacatgcttcatcaaacaaggctcgcacatagctgatctattaatgaagacatcactaatactgtgggatgaagctccaatggcaaacagaaactgtttcgaggcactagacaagagcctaagggacgtgcagaggtgtagaaatgagaatagttgtcaaaagccctttggtggcatgacagttgttctaggaggggacttcaggcagatcctccctattgtgccaaaaggaagaagggaacacactgtaaatgcaacgatcaaatgctcatacctctggcaacatttcgaggtgttcaatttgacaaaaaatatgcgactcaattatgtgtccaaagatcaaacagagcatcagaagtctgcagaattcgctgagtggatactacaaatcggcaatggtgacacgatttcgttagatgaaaaaggttgggtgaggatgcctagtgacctgctgttacaaaagggagatgacccgaaagctcaaatcattgagagtacctatcctgacctacaagacaattgctgcaagcagaattatctagaagaaagagcaatattgtgtccagtgaatgagaatgtcaatgagcttaatgagtatattatggaccagatccaaggtgacaaggtaacctaccttagccgtgacagtgtgagcaaatcagtgtcttacagccatgagatggaaatgttatatcctacggagtttctaaacagcttgaatcactccggaattccaaaccaccaactgaagctcaaagtcggtttgccagtgatgcttcttcgtaacatcaaccaaagtgcagggctatgcaacggcactagaatgacaattacgcgactaggcaataaggttattgaggcacagattataactggaacacacagcggcgatatggtatgtatcccacaaatcatcatgtcaccaaccgaaccgaaatggccgttcatgctaaacagaaagcaatttcccctctcggtgtgttttgccatgacgatcaacaagagtcaggggcaaactctaaacaaggtcggcctctatttacctaggcaagttttcacccacgggcagctctatgtggcagtctccagagtcacaagcagagatggcctgaagatcttgatcgccgacgaagaatgcccgggtgaaggaatggtgaaaaacatagtgtacaaagagatcctccagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0457932, RefSeq:Os10g0457932