Difference between revisions of "Os10g0483000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0483000| Description = Similar to Transcription factor homolog BTF3-like protein| Version = NM_001071418.1 GI:115482579 GeneID:4348929| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0483000|
 
GeneName = Os10g0483000|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0483000

Description

Similar to Transcription factor homolog BTF3-like protein

Version

NM_001071418.1 GI:115482579 GeneID:4348929

Length

2729 bp

Definition

Oryza sativa Japonica Group Os10g0483000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18697862..18700590

Sequence Coding Region

18698043..18698224,18698448..18698486,18698761..18698817,18698906..18699054,18699577..18699644

Expression

GEO Profiles:Os10g0483000

Genome Context

<gbrowseImage1> name=NC_008403:18697862..18700590 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18697862..18700590 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagcgtgcgcagaaagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagaagctgcaggatctgctgccatcaattatcaaccaacttggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaagaggctggtgccagtgctggagctgctcagggtgacgatgatgatgttcctgagcttgtccctggtgagacatttgaggaggcagcagaagagaaaaaggaatcatga</cdnaseq>

Protein Sequence

<aaseq>MNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLK RVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIIN QLGPDNLDNLRRLAEQFQKQAPGASGEEAGASAGAAQGDDDDVPELVPGETFEEAAEE KKES</aaseq>

Gene Sequence

<dnaseqindica>2367..2548#2105..2143#1774..1830#1537..1685#947..1014#actccccctatcctctcctcccaccgcgccgccgcctccgccgccgccgccgcggctccccctcctccccacagccaaggtgagctactccggcgtcactagctctcccgtcaagtagtatcaagtatgtttttcttcttgcgattttgtttggggttaggagagtgagtggttggatctgtgccttttcggctggtttaggtaggcgagcctctgcaagatttggcctggggcgacgcgtctccggcaatcgttcgaggtggttttcgtgaggggaatcgctatagaaggtaggaatgagtcgattgcgctgtggctgtttggtggatagtgttgatggtttttgctagatttgggtgccgtggcctagggtggcgtggtgcctagtttggtcgttgagtggtttggtgatggtgagatattgaggaactaatatggagatttactgggttgtagtggagttcttagacgaaatgagtgagcgcaacgtggaagctgtttaatgcgaaatggatagttttacagaatgtaatggagtggtcgcaatgagtaatctgcttaatggcaagtcggtagttttacagaatggaatgaacaagtagctttagccaggtagtaagatcagtgataatgtgctagtatctttgaccggtgttgctgcagacatgagcgtttagtaacttgcggtgtttctgttccatccatgtcagctaccttttgtattggcaaattattcattatgctatgtgtttgctttgttgaacctgctgttgttggccttttatggtgcatatgatgggttgtcttgttttgtggtcagaagttctttacttttttttccttttctgttacttattctgttgatatactttttgtaggattgtagctagttaagtttggcttgtctcgtactttactgaaagaactgatctattgtcttatgcagatgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagcgtgcgcaggtgtgtattattattatatttgcaaccagcatacggcatattgatggttacatgtggctgcccattgtgtttgattcatttttctttatgttgggctagtggtgtatatgtttaatgcttttgttgtgcattttgatgcatgtgtagtgatatgcatggtagcactatattctttttgtattacgataagacgaacattaataaatatatatccaattctatatgcttgctatttccttccataaattcatttgctcgctataatttcactctatattaaatatgaggggacttgaggctatttaacttggtaattatctatgggttaaagataagaaacactgttagataacatatgaccactactaatggtttaccgataataatcttgcgggataattgtcatctaagcatgcattgtcagaaaggatgtatattactcactactcactagtcatgatgtttcatactagtgctgttaggattctaattatgatatgataagttttgtgttggtgacagaaagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaaggtgagatcacttgaatactaaaatgcaagttctacacgattagtaatctacttgctttcttatattttatttcttggttttgttccagtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagagtatgttctccatgccctgtacttcatttctaatgtagcttttatcaataaatcttaaaacaacatttcagcctgtcattttgttctattttcctgtgtagagtagataatagctacccatagtatgtatatgtatgaaagacctaatttggactttccatttctcagagatctttttttgctcaagctaatataatattagctctataaagttgtattattaacttcttgtgtttacataacaataattttatgtttccctttttttgtacagagctgcaggatctgctgccatcaattatcaaccaacttggtatgcctctcgttgcaatttacaatgtttcatgaataatgatccaattagaagtttataataagcaataccaacatttcacctattgttgtcttgatgcttcagcctctgtttatttactaaaatttactgaaatgttgaagcaacttactgggccataacttaccctcatctttgaaagctgttgaagcttcgcttacctttgtttattcctcctattcaggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaagaggctggtgccagtgctggagctgctcagggtgacgatgatgatgttcctgagcttgtccctggtgagacatttgaggaggcagcagaagagaaaaaggaatcatgattttgttgcatgtcttctcctgtgaaggattataagttgcgaattgccattagagacctccgctcttaaaaacctctgacctaccttatttgtgtcagtgctcggttttgtcatgtacgaggatttggtccggtatgttggtggaattttacatcaattaaatgcctcttttggttgcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0483000, RefSeq:Os10g0483000