Difference between revisions of "Os10g0492000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0492000| Description = Similar to Chloroplast inner envelope protein, 110 kD (IEP110) precursor| Version = NM_001189289.1 GI:297727708 GeneI...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0492000|
 
GeneName = Os10g0492000|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0492000

Description

Similar to Chloroplast inner envelope protein, 110 kD (IEP110) precursor

Version

NM_001189289.1 GI:297727708 GeneID:9270830

Length

5635 bp

Definition

Oryza sativa Japonica Group Os10g0492000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19128070..19133704

Sequence Coding Region

19131637..19131667,19131943..19132037,19132279..19132343,19132549..19132615,19133299..19133397
,19133481..19133549,19133668..19133703

Expression

GEO Profiles:Os10g0492000

Genome Context

<gbrowseImage1> name=NC_008403:19128070..19133704 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19128070..19133704 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcgatgatgtagatgctgcaaatatgcacatggagattggtaggcgcatatacagagaaaggctggaaacaagggaccgggatgccgacatggaacagcggcgggcatttcaaaaactcatatatgtatcaaatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtcactgattctcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtctattgggagaggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttctgatgagattgctgctgagatgttcaaggagcatgcaaagaagttggttcaagaaaacatttcgtcagctttggacatcgtaaagtcgcgtaccaaagcagcgaatacccaacacaggttattgaagatgtga</cdnaseq>

Protein Sequence

<aaseq>LDDVDAANMHMEIGRRIYRERLETRDRDADMEQRRAFQKLIYVS NLVFGDASTFLLPWKRLFGVTDSQIDIAMRENAKILYASQLKSIGRGLDIGTLIEVRR AQLAYKLSDEIAAEMFKEHAKKLVQENISSALDIVKSRTKAANTQHRLLKM</aaseq>

Gene Sequence

<dnaseqindica>2038..2068#1668..1762#1362..1426#1090..1156#308..406#156..224#2..37#gctcgatgatgtagatgctgcaaatatgcacatggaggtattgcctcatgatccaagcccctttatatcttacttgcctgagacgttcttcctactttagtgccattttcacatttcctccattactccttatgccttcgactttgcttgtatagattggtaggcgcatatacagagaaaggctggaaacaagggaccgggatgccgacatggaacagcggcgggtacgtttttgtgctgtgatacataaatggatgtttaaaactttctactgcccctgatgataactattgtaaatattttgcaggcatttcaaaaactcatatatgtatcaaatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtcactgattctcaggtattttattatgaaatagtcatcacccatttaaactgtgcatagcatgtcggcattttctgatttcaccccatggagaaagcagatggcaaccttagacaatattctaattatttgtgttgattttgaattttagatgcaccacttccctaacataacattattgcaactgtgactacgaaggatctctagtgtgctgtacaacctctttgcattgttttgtgcagttctagatgcaatggttgggctagttggcttgcctgtatttttacactagatgcaatggttgggctagttggtttgcctgtattcattataatggattgcaaatttcatgctctagttatagagtactgaaaaaaaaaggcaggttgtacatgtcatatcaaattgacattcctttttcccctagcatggtcaacatgcataatttttactagcatgggtatcatagagtctcagactggagtgttgttgaaattaaagaccttttctgttgatagggttgaggatgcggattgcctacaagctctagtgcattcacatatctcgtctatcttaggacatatttcagaaattgaactgcttgtttaagccttattacttgtgctcatagcttctttgttttcgttcctttttatttggtgatattgtttggtgacactaccatgttcttcttgcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtctattgggagaggtatcactgaaatgcatatctttgtatttgtaggcaccccacatccgtatttgttatgcttacaagcttcagtgtaattatgtcagattagagacttagggcagtgcatatagtgatgctatcttattttttgatacactaattacttgatcggccttattgcatttgtacaacatttttaattttgacattctgttttctctaggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttctgatgaggtactgttttttctttctcgcaattcttctacttcatttggtcttacatcttaatataaatacctggggaaattacttagctaagcatgcatggctgctcagagtcgtgtactggagactagacaagttactgtattttgtttgtggacataaatctcagtatgccaggataagaaatgtggtatcaatctaagcattatatgttactaaatagcatattgtaatgtttaaattccttcagattgctgctgagatgttcaaggagcatgcaaagaagttggttcaagaaaacatttcgtcagctttggacatcgtaaagtcgcgtaccaaagcagcgtaaggaatctacacctctatggtgaattgtctaagcctacggattgattgccgttgacagttgacataagagcctgagctaacacctatttcctcttttcccaaatacattttgtttcaaactttgtttcatatacatgttgcagctttaaattgaactttttacccattttcccttaggttgattgataagtattatgtacttacaaatttacagtttattatttcatggcatgaatggatttttacctcactcctaaactatatgattacaggaatacccaacacaggttattgaagatgtgaagagcatccttgcttttaatagcttgctcataacactaagcaaacaccctgatcaagatagatttattcgtggtcttggacctatttcgttaggtacggtgatatatctttttgaaatcatatgttaatcaggtaggactttctcttaaggctggtcgttgtgcttttcttgtataggtggagagagtgatcatgataggagggctgatgatctcaagctactatatagggcctatgcaacagaagtactatcagatggacatctggatgatgagaaggtgattccatgcatcctcttgttataatcccactttattgctaaacatcttgatgtaagtacaccggtgctgctttggaatgctgccaatcaatggtggcaaacctaactcatttaactctgcagtctagatcctgtaccttgtactgttattcctgatgccactggaactgctgtttacggcagtacttataaatggtgttttagttggaacataacatatcctgaatgcacgaaaaacagtctgccacctgttgttaaaaactaggagaagattaattgtgcatctatttagtgtatcaagatcttagcaaaagccagtattgttaacccttgaaaagcagagcaagaagctgatccgagacaatctggttcttgccataaccgaagtgtcatttggaaaaagcataataaaccattcttattgccagatgacagttgtgaattatgtaacattggttcagtgtcttcaatctacatggacactactctcctgtatcgtcaacttggttcagatcacttcttgaaaattgttggtctaagtactcaacaaaaattctcatggtgagactgattaactatacccagttggttgtgtaataacatgtgctacctctatcccaaaatacaaggagttttagggttggacatgggtattaagaaagttggtgaaattagttggagaagttgttatattttgggacaaattttgaaggctagaagttatattttgggttggaggtgttccattattgttctgtaaatggtactagcaagtactccctccatattttaatgtatgacaccgttgactttttaaccaacgtttgaccactcgtcttattcaaaaattttatgcaaatataaaaatacttatgtcatgcttaaagaacatttgatgataaatcaagtcacaatacaataaattataattacataatttttttaaataagacgaaaggtcaaatgtttgtcaaaaagtcaacggcgtcatacattaaaatatggagagagtatatccttgctgttcaaatttggttgttattagttcatcttatatttggtgcatggattatgacccctgaatctaagtttataaggtatcaagatagcatcttaatagaagccttttaatctgattacaataattcagctcgctcctttgaatcaactgaggaatatatttggactgggcaagcgtgaagcagaatcaatcatgtcagatgtcaaagctcaagtatacagaaagagacttgctaaatcatttaatagtgagttggctgcggcccctagcaaagcagcattcctccaaaatatctgtgaagagttacagtttgatccggaacttgctagtaagatgcatgaaggtaccttcttgacaccttctcttgttacactataattttcacagcatacctgtgcttagctcgactgcctagtcatttattgaacggagaactggttttcacctgatggctctgtgcagaaaatcactatacaccatcagctctatgttgacactgctgaattgttatcctagaccgtatgtaggaagtacatctgtagcaattcagttgtctgcattttggttcatctgggctgtattgcttctcatgattaggaatggatatccaatagaaaagaaataagacaaatgtggtgggactagaagtactatttgtctctatgttcatgttaaacagcattactatttgtaagataagatattcctcaccattccatcttaaggtacatcatcacatgctttaataaagcatcaaagtcccagaaatgctatcgacaagtgtgagttccaagaaatgccatcctacaaatgattttgtcccaaaaatgccatcgccgttagggttctgttccattctgcgctgtaaaatacactgttcgtcctatagaacttaatggcgcggaatggacggaaccctaacggcgatggcatttttgggacaaagtcatttgtacgatggcatttcttggaactcacacttgttgatggcatttctgggatttggatgcttgtcaatggcatttcttggattatctctattaaatattagttggcaaacatgcttttttcgagatgttctctcctggttgctttccttgatatattgttaatacccactcatattatgctccttcgaactccagacatttacaggcagaagcttcagcagtttgtagcggatggagagctgaacaaggacgaagtggaagctttgatggcattccaagtgcgtctctgcattccacaagaaactgttgatgctgtccattcagaaatctgtggcaagttgtttgaaaaggtgatatgaaatattctatgttgcctgttctatatttcccttgttcaggcaaagttgatggcctgttctgtgttagtggtgttcttacaaccgttagtgctttgcaggttgtcgtggaagcaatttcatctgttgatggatatgacactaatagacgacaggctgttaagaaggcagcacaaggtctgaatttgaaaaacgagtctgtcatggccattttcagcaaagtggtatgttaatccccattaccaaaaaaaagtgctagatgatattatttttcaatatattcctactgtgaatgaaattcacttctatattaccaaatccatgaccaggtacggaagttattcctgaactacattcagagagcaaaagcagctgggaaccgcattgaaactgcaaaagagctgaaaaagatgatatccttcaacacagtagttgtgagtgagcttttagctgacattaaaggagaaccaacaactgctgaacctcaaacatcagatgcaacctcagaacctgaagtcagcgagtctgagggggatgatgaatacgaatgggaacagctggagacattaaggaaaactaggcctgataaagagctcagagagaaactggcaaagtcaagccagaaagagataaccctcaaagatgacattccattgagagacagagctgagctgtatgaaacatatttggtgttctgtgtcactggggagacgaccaatgtttcatttggaacagcaatctccacaaagaaagataattcagagtatttaatgctgaagcaattaggagacatacttggtttaacccgcaaggaagctcagaatgttcacattaagatggcagaaaaggcatttgtgcaacaggctgaagtgattcttgctgatgggaagttaacagaggccaaggctgaccagcttgcaaagatacagaagcaagttggtcttcctactgagtatgcac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0492000, RefSeq:Os10g0492000