Difference between revisions of "Os10g0506800"

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(Created page with "{{JaponicaGene| GeneName = Os10g0506800| Description = Nuclear protein SET domain containing protein| Version = NM_001071548.1 GI:115482839 GeneID:4349066| Length = 5383 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0506800|
 
GeneName = Os10g0506800|

Revision as of 21:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0506800

Description

Nuclear protein SET domain containing protein

Version

NM_001071548.1 GI:115482839 GeneID:4349066

Length

5383 bp

Definition

Oryza sativa Japonica Group Os10g0506800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19829404..19834786

Sequence Coding Region

19829700..19829924,19830050..19830130,19830232..19830346,19830444..19830607,19830690..19830923
,19831009..19831164,19831496..19831627,19832233..19832367,19832454..19832840
,19833091..19833209,19833297..19833507,19833651..19833722,19833925..19834011
,19834376..19834510,19834623..19834751

Expression

GEO Profiles:Os10g0506800

Genome Context

<gbrowseImage1> name=NC_008403:19829404..19834786 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19829404..19834786 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggctcaagtcggcggtgccggcggagctccggcgagccgtcggcgagggcacggcggccgacctcccctccaccacctcccgcttgctcgccttcctcgaagctctccctctcttccgccaggtgattggtgagctgaccgacccggagctcgcgctgtgccgcaaggacaaggggagggcggccgagctgaaggggaaggggaatgcgtgcttctccaagagagagttcgagcaagcgcttggattctactcgcaggcgttacggtacttcccgattagtcctgatggaacggatgcaagcttgatagccacattatatgtcaaccgtgcctctaccatgcataaattgggccttttggaagagtgtctgcgagattgcgacagggccatttctgtttcacctaattatgctaaggcatggtacagaagggggatggtaaatgcatcttttaggaactattcatcttccatacatgatttggaggttgctttgagcatggaagtaacctcttctggaaagagtaacatagaacaagagttgaagttgattttacaaaagcatcaaaatgtgaatgaagttgggacagcaagcagcaattgcatcaatgcagatatgccacatacagagcaacagcctaaggttattctagaatgtacctctacacccaacaaaggtagaggaatgtcgtctccaaatgatatttctccagcctcactgattcatgctgaggatcctcttgctgtgattatcatgaaatcttgccgggatactcactgccactattgctttagtgaagctccagcagatgtcgtagtctgcccttcatgtacaatacccatttactgttcaaacaggtgccaggagaaggctataggacaaatgtcttgtaatcaaaatactcatctagaatctaacaataatgtggtggatattgcaaaattgagtgtaacttctacaaagagcaagactccagactctaaacaaattgctgaacataggcatgaatgtggaggtgcctgttgggcagctgttttgccagctgatatagttttagctgggcggataatggcacagtacatagagaaacaattgctggtcggaaagagatctaccatctctggtccaaatctggatctcgttcaccactatgatcaagattcttctgctagcaaatttgagtcacatatatatgcaactgtcctgttcttatgcctccagagctattataaatcaggtgtctcgtgggcagaggattctttatcacagttggttcttttgatatgtcaaattaaagtcaactcaattgcaattgttcatatgaaatccatggatggagtcaaggcgctgacaaaggggttttctggatttagtggtgatgttatgtgtagtgtggaacaggtcagggttgctcaagctatttacatgtctggtagctttttcaaccactcgtgccggcccaacatacatgcatattttcattcgcgcactctcattctaaggtctacagaatatataaaagcaggtagcccaatcgagctgtcatacggcccacaggttggtgagatggatcttccagagagacaaaagtcacttcgggagaattactacttcagttgtgggtgttcaagttgttcagtactaagtctatcagaccttgtcatgaattcattttgctgtccgcaaagtaattgccttggtgctgtatcagaattaattcatcatagacacaaagagaattttgtgcatgtttccataggagaatctcatgtctgtacattatcattacctgatgtatctaagtttgatgaggatatagtgaaggttggaaaactatttttcaagagtgataccatgttcaacatagatcctggattctgtatgagttgcagatcccaacttgacttgtcttctgctgttgctatgtcagatagagcaacatcaaagataaacagattgaaggagcttccatctctagacaatgtccctgaagtcctcattgcagaagcactacaatccttagaacgcattgagaagttaaggcacccatatagcaagactcttgctcagtcacacgacacaattgctgaggcctttgctaaggtaggagatcaagaacaagcaagaaaacactgtgaagcatccatcaagattcttgagaagctttaccaccccaggcacatcatcatcgcgcacgagttgatcaagctcgtctccatcgagctttccatgggagatggcgcaagcgcggctgctgcattcgcccgggcagatgcgatattctcgctgtattatgggcctgatgtagagaggattttgccctacgttgatgtgctcagaagaactgtcagtgaacggtctattgattcatgttga</cdnaseq>

Protein Sequence

<aaseq>MERLKSAVPAELRRAVGEGTAADLPSTTSRLLAFLEALPLFRQV IGELTDPELALCRKDKGRAAELKGKGNACFSKREFEQALGFYSQALRYFPISPDGTDA SLIATLYVNRASTMHKLGLLEECLRDCDRAISVSPNYAKAWYRRGMVNASFRNYSSSI HDLEVALSMEVTSSGKSNIEQELKLILQKHQNVNEVGTASSNCINADMPHTEQQPKVI LECTSTPNKGRGMSSPNDISPASLIHAEDPLAVIIMKSCRDTHCHYCFSEAPADVVVC PSCTIPIYCSNRCQEKAIGQMSCNQNTHLESNNNVVDIAKLSVTSTKSKTPDSKQIAE HRHECGGACWAAVLPADIVLAGRIMAQYIEKQLLVGKRSTISGPNLDLVHHYDQDSSA SKFESHIYATVLFLCLQSYYKSGVSWAEDSLSQLVLLICQIKVNSIAIVHMKSMDGVK ALTKGFSGFSGDVMCSVEQVRVAQAIYMSGSFFNHSCRPNIHAYFHSRTLILRSTEYI KAGSPIELSYGPQVGEMDLPERQKSLRENYYFSCGCSSCSVLSLSDLVMNSFCCPQSN CLGAVSELIHHRHKENFVHVSIGESHVCTLSLPDVSKFDEDIVKVGKLFFKSDTMFNI DPGFCMSCRSQLDLSSAVAMSDRATSKINRLKELPSLDNVPEVLIAEALQSLERIEKL RHPYSKTLAQSHDTIAEAFAKVGDQEQARKHCEASIKILEKLYHPRHIIIAHELIKLV SIELSMGDGASAAAAFARADAIFSLYYGPDVERILPYVDVLRRTVSERSIDSC</aaseq>

Gene Sequence

<dnaseqindica>4863..5087#4657..4737#4441..4555#4180..4343#3864..4097#3623..3778#3160..3291#2420..2554#1947..2333#1578..1696#1280..1490#1065..1136#776..862#277..411#36..164#gctgctgcccacagcccacacactctccctcgcccatggagcggctcaagtcggcggtgccggcggagctccggcgagccgtcggcgagggcacggcggccgacctcccctccaccacctcccgcttgctcgccttcctcgaagctctccctctcttccgccaggtaaccacctcccgtcgctcggtgctccgctgctcctcctcttcccccaggcatgggggggtgcggctagatttgatggtatcgttcgcgtggcgtgttggtgtgagggcaggtgattggtgagctgaccgacccggagctcgcgctgtgccgcaaggacaaggggagggcggccgagctgaaggggaaggggaatgcgtgcttctccaagagagagttcgagcaagcgcttggattctactcgcaggttgatttgttgtgttactcgtttatttttcttcttcttcctcttgattgcttggattgtgtaggtgatgaagtgatgggttctgattcgattggtaaaaatgagtgcaagttcagaagtcagaagtaactttactgttcgaagtttgttgttgttcacctgttctgttttttaaagagtgatgcgttgatattgcaaaagaaaatgatcctcactccttttcagtactagcatttatgtgtgtggactgcaatctatctgtctttttttttttggaacaaatcggcacgggacaatgcccattttattgatattcaatctatcagtcttgatgatagctaattgtttttctctgttgttacaggcgttacggtacttcccgattagtcctgatggaacggatgcaagcttgatagccacattatatgtcaaccgtgcctctaccatgcatgtgagtctttcatttacctgtttgcattctggacatattgatgtaatgttctagttcttggtggtgtttcatggtaaacagtgcattgtgaataggttatattcagcttattcccttttatgtatctaaggatttttttcctgccatctgacctcattactggatagtgcatgcgttctgatcatgtttctgaagtttacagaaattgggccttttggaagagtgtctgcgagattgcgacagggccatttctgtttcacctaattatgctaaggtagcaatacggtttgggaactttgttgaatgcatcttatatgcttgggttgtttgttctgtctctatttgcaggatttcactctaaagaatggaaactaagttactctgatgatttcacctgtttctgtttatgggtttcaggcatggtacagaagggggatggtaaatgcatcttttaggaactattcatcttccatacatgatttggaggttgctttgagcatggaagtaacctcttctggaaagagtaacatagaacaagagttgaagttgattttacaaaagcatcaaaatgtgaatgaagttgggacagcaagcagcaattgcatcaatgcagatatgccacatacaggtcggtaatgatggtagacaaccaatttagtattcaaaaaggttaggtacgtatgtatactaagtgaacgatatggctaaatggcagagcaacagcctaaggttattctagaatgtacctctacacccaacaaaggtagaggaatgtcgtctccaaatgatatttctccagcctcactgattcatgctgaggatcctcttgctgtggtatgatcaagaatcatctcctcaattgtttatgccaaatgagttttttacgtgccacctaaagctatactgagtttcattagatctttgtcctagtcaaatatgaaatttgataagttatagtatatttttactgttttattatgccagggcagtagcttatctctatgagcattgttaaataatcagtcaactattgtaatcttgaactgaagttctatatgcctcttacttgtacagttgtatgcagattatcatgaaatcttgccgggatactcactgccactattgctttagtgaagctccagcagatgtcgtagtctgcccttcatgtacaatacccatttactgttcaaacaggtgccaggagaaggctataggacaaatgtcttgtaatcaaaatactcatctagaatctaacaataatgtggtggatattgcaaaattgagtgtaacttctacaaagagcaagactccagactctaaacaaattgctgaacataggcatgaatgtggaggtgcctgttgggcagctgttttgccagctgatatagttttagctgggcggataatggcacagtacatagagaaacaattgctggtcggaaagagatctaccatctctggtccaaatctggtataagagaattcatgtctgcaagcactcaaatgttatagcataagtactgttacatcaggaactaatgaactaaactgttgcaggatctcgttcaccactatgatcaagattcttctgctagcaaatttgagtcacatatatatgcaactgtcctgttcttatgcctccagagctattataaatcaggtgtctcgtgggcagaggattctttatcacaggtatatgtggcatttgtcctcaagagttccctttgtatgtttacattttcaattgcttgtttcattacaactgtggcttgagcttgatggctgctttagtcagattttttggattgttctggatatcagatttgacattattgtttatattagctcagtactccctccattccaaattgatctacatatttcataggtacactaagaccaagaaaagttaataactctctcatactatatttactctagcatcaaacttgatgcatgcactatccccactatttcttagccaatagcaaatcaagatattgcatgtgggttatacttgtgtgcatggatgcatgcatcaatgtccatttactccaatgcacaaataacgaataggcttaatgaatgaacacaaatatgtagatcatttaggaataacctcaaaaatactatatgtagatcaatttggaatggagggagtatttcttaaactttcagaattctgccatatacttctgccccctaggatgtagattgtagagaactgatggaacactattttcatatttatttataattactgaagaagaagctaattcttgtaactatatctgcagttggttcttttgatatgtcaaattaaagtcaactcaattgcaattgttcatatgaaatccatggatggagtcaaggcgctgacaaaggggttttctggatttagtggtgatgttatgtgtagtgtggaacaggtttgtctcctcttcttatcttctctagtaacatcaccctataaaagctgtttgatatttgttgccaaccatggtgtttctataggagtacattatttaggatagtatgtttctgaatcatgttcaggtaaatagcaatttggaaattgaaaaattctttgtagtaaattcagcaaacacatgacaacatgtagctaatcttaaattgcaataaatagcaatatcaggcacagtattgtattactcttactttgctttagttgagttatcgcaccgcagctcatttattatcttgaccatctataacctgtgtttagttttgcattgttaggtcagggttgctcaagctatttacatgtctggtagctttttcaaccactcgtgccggcccaacatacatgcatattttcattcgcgcactctcattctaaggtctacagaatatataaaagcaggtagcccaatcgagctgtcatacggcccacaggtatctttcctccctccctctgtgatatactgacatcacgtgtagcacatatattttctgcattgtctatgtttctcgttttcaggttggtgagatggatcttccagagagacaaaagtcacttcgggagaattactacttcagttgtgggtgttcaagttgttcagtactaagtctatcagaccttgtcatgaattcattttgctgtccgcaaagtaattgccttggtgctgtatcagaattaattcatcatagacacaaagagaattttgtgcatgtttccataggagaatctcatgtctgtacattatcattacctgtaagattattctcctcacatattcttttctcaaaagtttcttgttagtaatttggtggtataacagttctttttgcatcaggatgtatctaagtttgatgaggatatagtgaaggttggaaaactatttttcaagagtgataccatgttcaacatagatcctggattctgtatgagttgcagatcccaacttgacttgtcttctgctgttgctatgtcagatagagcaacatcaaagataaacaggtatatcctatattcctgtgaaattgcacatgaattgctggatttgattccattgtctgtgctctttacacatacaaattgacaattatgctgacagattgaaggagcttccatctctagacaatgtccctgaagtcctcattgcagaagcactacaatccttagaacgcattgagaagttaaggcacccatatagcaagactcttgctcaggtttggtgcttgtactagtttaattatgagttttcttgcacttgatgtaaaaaagaatgatctgagttctttcatttttactaccatattgaaatctgtagtcacacgacacaattgctgaggcctttgctaaggtaggagatcaagaacaagcaagaaaacactgtgaagcatccatcaaggtaataatcttctccttttcctcaaatcatcactcggagtcactcactcgcccttctagggactatagaaacatctgttattcattgttctgacttctgagttaccctctcctgtgatgatgcagattcttgagaagctttaccaccccaggcacatcatcatcgcgcacgagttgatcaagctcgtctccatcgagctttccatgggagatggcgcaagcgcggctgctgcattcgcccgggcagatgcgatattctcgctgtattatgggcctgatgtagagaggattttgccctacgttgatgtgctcagaagaactgtcagtgaacggtctattgattcatgttgaccatcttacagtatgtgtatcagtacatgctgttgtatcagcaattagtagacaaatctagaaaaagagatcagattagttagacccattacgttacagaaatctagaaaaaatagagcatattagttaaacccatctactacattacagtcttgcccctgtgttttatgaattttcttctgggattttctgaaacctacatgatttctgaaatttcattagcatttgcagtgtcaaaagaggatggtactagagtaataataagatagtaaagcctggtagggctctgttttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0506800, RefSeq:Os10g0506800