Difference between revisions of "Os10g0516600"

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(Created page with "{{JaponicaGene| GeneName = Os10g0516600| Description = Protein of unknown function DUF604 family protein| Version = NM_001071600.2 GI:297610788 GeneID:4349119| Length = 94...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0516600|
 
GeneName = Os10g0516600|

Revision as of 21:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0516600

Description

Protein of unknown function DUF604 family protein

Version

NM_001071600.2 GI:297610788 GeneID:4349119

Length

9471 bp

Definition

Oryza sativa Japonica Group Os10g0516600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20403099..20412569

Sequence Coding Region

20403099..20403196,20410471..20410891,20411676..20412569

Expression

GEO Profiles:Os10g0516600

Genome Context

<gbrowseImage1> name=NC_008403:20403099..20412569 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20403099..20412569 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcaagccccaccacgccgcgcagcctccgccgccgccgccgctcccgctcccgctcccgctcccgccgcggaactgcccgctcgcgaccgcggtcctggcgctcctctccgtgctcctcgccacggcgctgtgggtcctcctcgtgctgtccccggcgtcccacgcgaggggcccagccgcggggctgtcggatgcggcggacgcggaggcgtttgcggtggcgggcggaggaggcggaggcggcggggagggcgcggaggccccgctgtcgctcggccacatcgtgttcgggatcgcgggctccgcgcacctctggccgcgccgccgggagtacgtccggatgtggtgggacccggccgccatgcgcgggcacgtgtggctcgacgccggggcgcccgcggcgccggggccgagcgcgtccggggaggggtccctcctcccgccgatccgggtgtcggaggacacgtcgcggttccggtacacgaaccccacgggccacccctcgggcctccggatcgcgcgcatcgccgccgaggccgtgcggctcgtgggcggcggcggcgggggcgcgcggtgggtggtgctcgtggacgacgacaccgtggtgtccgcggacaacctggtggccgtgctcgggaagtacgactggagggagatggtgtacgtcggcgcgccgtcggagagccactcggcgaacacctacttcagccacagtatggcgttcgggggcggcggcgtcgcgctcagcctccccctcgccacggcgctcgcgcggacgctcgacgtctgcatcgagaggtaccccaagctgtacggaagtgacgatcgcctccatgcttgcatcaccgagctcggagtgcccctctcccgcgagtacggattccatcagtgggatatcagaggcaatgcccatggtatattggctgctcatccaattgctcctttcatcagtatccaccatctggagcttgtcgatcctatataccctggtttgaactctcttgagagtttggagctctttacaaaggctatgaaaacagaacccatgagcttcttgcagcgctcgatttgttatgataaaaggcagaagtatacatttgcagtctctttgggttatgttgttcaagtgtacccctatgttcttcttcctcgtgaattggagcgatccgagcggacttacattgcatataataggatgagtcagcgaactgaatttgattttgacactaaggatattcagaaatcattgtgcaagaaacctatattatttttcttgaaggatgtttggaaggatggaaacataactagggtggataatctgtttcaagcaggtcgtgacaacgagagaaagcaaacagccaatagctcggccgcgggcgtccctttctcgtgcatggctgcaacctga</cdnaseq>

Protein Sequence

<aaseq>MRKPHHAAQPPPPPPLPLPLPLPPRNCPLATAVLALLSVLLATA LWVLLVLSPASHARGPAAGLSDAADAEAFAVAGGGGGGGGEGAEAPLSLGHIVFGIAG SAHLWPRRREYVRMWWDPAAMRGHVWLDAGAPAAPGPSASGEGSLLPPIRVSEDTSRF RYTNPTGHPSGLRIARIAAEAVRLVGGGGGGARWVVLVDDDTVVSADNLVAVLGKYDW REMVYVGAPSESHSANTYFSHSMAFGGGGVALSLPLATALARTLDVCIERYPKLYGSD DRLHACITELGVPLSREYGFHQWDIRGNAHGILAAHPIAPFISIHHLELVDPIYPGLN SLESLELFTKAMKTEPMSFLQRSICYDKRQKYTFAVSLGYVVQVYPYVLLPRELERSE RTYIAYNRMSQRTEFDFDTKDIQKSLCKKPILFFLKDVWKDGNITRVDNLFQAGRDNE RKQTANSSAAGVPFSCMAAT</aaseq>

Gene Sequence

<dnaseqindica>9374..9471#1679..2099#1..894#atgcgcaagccccaccacgccgcgcagcctccgccgccgccgccgctcccgctcccgctcccgctcccgccgcggaactgcccgctcgcgaccgcggtcctggcgctcctctccgtgctcctcgccacggcgctgtgggtcctcctcgtgctgtccccggcgtcccacgcgaggggcccagccgcggggctgtcggatgcggcggacgcggaggcgtttgcggtggcgggcggaggaggcggaggcggcggggagggcgcggaggccccgctgtcgctcggccacatcgtgttcgggatcgcgggctccgcgcacctctggccgcgccgccgggagtacgtccggatgtggtgggacccggccgccatgcgcgggcacgtgtggctcgacgccggggcgcccgcggcgccggggccgagcgcgtccggggaggggtccctcctcccgccgatccgggtgtcggaggacacgtcgcggttccggtacacgaaccccacgggccacccctcgggcctccggatcgcgcgcatcgccgccgaggccgtgcggctcgtgggcggcggcggcgggggcgcgcggtgggtggtgctcgtggacgacgacaccgtggtgtccgcggacaacctggtggccgtgctcgggaagtacgactggagggagatggtgtacgtcggcgcgccgtcggagagccactcggcgaacacctacttcagccacagtatggcgttcgggggcggcggcgtcgcgctcagcctccccctcgccacggcgctcgcgcggacgctcgacgtctgcatcgagaggtaccccaagctgtacggaagtgacgatcgcctccatgcttgcatcaccgagctcggagtgcccctctcccgcgagtacggattccatcaggtatgagcttatttttcaacattttgtggccattcaacagaaatgtgggttgggtattaacagcgcttagattattgagtggtcttatgaaatgttattcgcctcagcaattggagcacttattctgttctgctttgtacgatctgctgatagactagttaccagtgacacagtgacttgaattcagggactatccactctctcctgatcccatgcatgaatttagtgcgaaatagcatgctgtctatgctcacggaaattcgggggattgctaatgaactagcccaatttagaatttgcgttagatcttgggaggcatgcatattgatccactctttggaaccttaccatttctgtgatgcttgattcattatggcagaaaggaagtgtagcctgtctgctgttgtgccaacctagctggctgttatatgttcaatcagaatacatgaacaatagtagtagggtcttgccagagtggttatgttagattgatagtgaaaggaagtttggtagtacttgaatgttacctttctttgggctcttttatggccagcagaagtttttgcaagaacttgcctgcttgctttatagtactattgtaatttctgtcaaataggtaccagcatgctgcatgtgtttgaaaatatgataataagtgattagcaagttcttttttctgtttgcacattaacaagtcatatttacttttttttattaatcgtgtgtatggagaactaaactctactctcttaatcttacttttgtccctttgcattgtaatcagtgggatatcagaggcaatgcccatggtatattggctgctcatccaattgctcctttcatcagtatccaccatctggagcttgtcgatcctatataccctggtttgaactctcttgagagtttggagctctttacaaaggctatgaaaacagaacccatgagcttcttgcagcgctcgatttgttatgataaaaggcagaagtatacatttgcagtctctttgggttatgttgttcaagtgtacccctatgttcttcttcctcgtgaattggagcgatccgagcggacttacattgcatataataggatgagtcagcgaactgaatttgattttgacactaaggatattcagaaatcattgtgcaagaaacctatattatttttcttgaaggatgtttggaaggatggaaacataactaggggttcttatatacgtgcaagtgttcgggatgacctaaaaaacaaagtgttttgcttcaggtcaccccctttacctgacatagacgagattcaagtttctgcatccccattaagcaaaagatggcatctggtttgttctaatattcctaacaatatatcatatcttgtttctacatttacattggctaattgtcgtaccactgatataggcaccaagaaggttatgcagtgcgcttaaaggatctattaatggcactttgtttatgtttgttcggcaatgtggacgggggacatttggctcagcttctgattctctataattgatggaaagcagaggtgtatattttctgttcagatgatacctggaagatgtagttaccatcctacattctttgaatcgagtgttgtgggggctctttttctgcctcgagcacttggcagttaccaactgcttgttatacttggtagttgttgaaggtagtttctgtatcttctgaatagtgacattagaaaatagttttaatcgttgaccgtaacaattgggattcatttttgatgatttttaaggtgcttctaaaattatgatggtttctcaggctagtaccattccctatttgacgattgatgacctgtaatatatctaatgtaggccttttcaggttttcattcactttgtactatatttcatcaattggaaaaaaacccaatcatgcatgggctatactaagtttaaacataggtctcagacataaatatggaccttacttattacataaaaaatggcatcatgcttgtccatacctactttgagttgcaaattaattccatgtgctatgtatgcttatcatggtgttgtcttttgatatggatgcaagaggacccttctaggagatcataaccccccctcccccccccctatttcattagtagaaatgagcattacaaagtttctgaccgtcagtattatgattaattgatcaaaatttgatactttcttcttgtcatgtaccattttgttattaaaggatatagtttctaactttgtttaggcatcagagcaatcaaatcattgctaatatacaaaaaggaattcagaaggatatgcagatatacaaacagttgaaaaatgacagggaaaaaaatatgcctgctgattggagagagattttttttgttgttaaaaataagttagcacacaggcgtacgattcaaaattaattgtggtctaatggctgagtcgatgagcgaaaatacctagttgcttcgcacgatgaatccagttttctacgtcttgcatacatcttatgagaaaataatcattgactgacatggttgtcaactattatgttccagttacgaggatctttttgcagaaagctctgaaaatttaagttgcatttgccattttagttatttgaaggaaaaaaaactgttgtgtctagtcataaactgccttgagcttcatttttcctaatttttataaagaatgttggagtgggatgcttagcttccgacaatcttttacagtgtcagtgtgctgtgtgcggtactctgtttcgacaaccttaatgcttatttaagagtaactggcttactggcatatgcagattgatatttttcatttcccttgcattttgttttcagtatccggtgctttatctgtagccttttttcaacactctgttctctacttttatgtcgccacatgatgtgctttaatcaatgctttatgctgtggtcacaaatgttctaacttttgagcaaagtttcagtgctgtattcattcacttcaatagcaagattaatctatcatggtacattgcaaaagttgccagattgacttggtgttctgaaattcttttgtagcagtttgttaatagaagaatctgctgaggaacaaagctgaaaaagaaatactggtggctttttttgtggaatcttcaagctactcgtggatgtacgatacttgtggacggagactgggtgaacggagtgtcaccctttgattagctgcattagtctgactgaaacaactttccggcttcattctttgagacccgtgtactaaccttgatggattctcagtcgaaatgtgaaatcactaaatcaggtaagaacagcactccattagcattgtattggagggctgtaaacctttcccgataccttgtttagaactgtaaatcagtgtgaactgtgaagcgccataaccatgaaagagattccattcaatctttattcctttccagttcattctgaaagccgttatctgctatgacgcctaaatttacttttgtgtccattttagtcctactccttttgatatctgctttatactatcaaagtcttaccacagctaaacatgttacctttattggggcatgtctaaagttgaggatttaaatggggcaaatccgcaaatgcacatgtaccttttccagatcaattaccttaagctatatgccatatcctttctgtagtatatccttgctgttctcgtgtaagtcgaatttctaacgtgtttttccttttcaattgacttccctgatttagtcacggttcaatccagtcttgctgctcattattctacgaatctcccgtatgtacttatggtacactgtttgctgctaaattaacatatgaactgctatgctgtatctgtttgctgctaaaataacatctggacttatatgctgtgtggaagtgattcatcttccttatcaaaaaggaaaataaaatgtgtatgtctgtgatgtgctctccacggtcggcaagcagatatttaacctcctagttctgttcgttgttattttcagtacatgatgtttcctgagtatcaacaatatttttcctcttattttttcccctgaggtgggactatcaaccatattttacccgttgctaatggctcaagtggttggtggttacttgtcaagggcacaaaacatggtacttgactactcctaattctcaagtaacaggtttgttcagatactgcatcgctgcttttctgtttactctgcaaattgcgatcctcttattacaacttgtgtagcaactcttgtgctgtgcaaaggcaacactacgtactgcgctagtacatggtccaatcagggcccaagcccttgaggcccatcttagcccatgtggtttgagctttgccatgtgctccctgagacagtaattagagttaagttagcaccctagtgggcctttttcttaattgtccatgagctttggcatccattatcgaaatgatatgaacataagaggatttgaataggtgggaaggaggttaaacatcttcccactacttgatcattggccctattctttccttggtgcatttgtaaagtccaaatataaattttgatgtactaacaactatgctttccaactgtcaactgttaggcgctgactttttgtagtttaagactggagatcagattcggcgtatggtcgcatggtctcgtgggacatttcatatcctcgcaaagctagcttaaatgttccatcatggggtcatctgtcaacgcattttgcatgttgattttgatatttcatatcttcgcaaagcttatcggacgtagctaaaatttaaattttaaaacttaaatttaaaattgattttgatgctttttatcgtagtttattttcaacattagcttttaagtcgctaaaatatatatatgtagaagttatatataaaattagtttatatttgctaatcagcgttacgccttataataagtggtatgtgaaaggcaaaactatcacactgggactgaggtgctctcctctaatatcaactctgttaagtttcgaattccgtgaaccaaaattcttttgtcagcttccaccaaaaaatgtcctcttatttcttctcttgaatataagagcctggtctctataggtgaagtacagcagttttaccaactactatagtctggttgacacagtatttttttttcctgatcatgcatttacgtgatataggcccatattaactgttactcattactgttgcgagcaaaacctaatttcagatcaaggaccacacgagtgtctctgactttcagattcagtgtgaaaaattccttgtatttattccgtggacttgcaggctgttactttgtcttttggtgttcatccagcccatgttttgtcaactctctacctaacttgcttcctcaatcttttcctaccctctttctactgtgttttgccccagtaggtaaccaattccaatgtaaaaaagagaaaaggagaaatgtcttcagtggcgtgcagccagggtagtatagttgtgtggttaaaatttggtttgacatctctggctctgaccagcaacagcatcatctttgctcctaatgaattctaatgaaattgctcaattattaccaggatttaagaaaaacctacctgcatgcatgatctaacctctagaaaggagtccttttgccttctactaatccatttctaatttttctttctgcgaaatgcgatccatcattccatctcatcgatcccaacattttgcaaccgatatacaaaacagtacagtgggaattgtgggaaaggtgagaccaactgtgcagtaaggcgagcagttcggttgcacgctatctgaaacatgttttgtgtgaaggctaggcggttggaactaacatcatatcgctggcaggcagcgtgcgtgcgtgtgtgtgaggatgaacaaagagacgatgcgtgccgcaaaggaaaagcgcatgcaaattgccttcgttttcgcgtcatcccgcccggtgcatggctggcacgcgccgccgtaagcaaagctacgccgagcatgggagtcgccgagctgcggtggcacgtacgtggacctattccaaacaacttcaccgttttgctcttcagcttatcagccgtaattaaaatttaaaattatcagacttaatttaagggttgattttcaatttttttcgtcgttgtttatttttagtttagagcttttaaatcactaaaaacatatataaaacgctttacttatactatatataataaaccttacggtttaaaatctgctgtaggcgaaactatgggaatgaaaaatgtttctcaataactaaaccagccacttgtcactttgatcattcgttcacagatcacaggataagttgactaagttcagaaaaccgactgcaaaatttctcccatggcacgagctctctatctctctgcccccaatttggcgtagaaaagaggtcaaaattacgtagaaagctctttctctgtttctcataagtgagctttgagcttaacgtcgaaacgtccaagtgttcaactctccaagacctcgatgatgctctctgttaagaggccaaaattacacgtcagatgagctgcctagtgtggccgtgtccgtctgcaactctgtttgcttctcccattgggtaaaaacccaattattgatcttgtgtgctcaactgctcatcagaaggtggcatctgactatttgtaccttctgcaaattcatccacttctgctgcccttttcacatctcctaactaattgccgtgtacttacacgctgatgccatttatttcctcagcttcatccacctctcactgacccattacgtacatcaatcatcagatcacacagagatactcctatactcctccagaatgtcagtgtgctacagtacgtgtaatttcagaaacacggattcagcagagtggtttagccaataattgtgcagagtttgcttgcgtgtaatacaaaccaatccaaaatgtgcatcaaaagcttggagttaaaactacctacccatcttcacctaatccccatccttattttacgagtccttctgtactactaccacttaattaccacgagtcattttattcgttatcagtagcaatcaccaacatctcatccgctgttcatctttgactcctgaaagctgaaaaaacatactccgtacagtactctactagttttttctaaaaaaaaaaaaccatatactcgcactggaagcagtaaattgactggaattcctcactccagattacgtgaagaaccgagatatttcacgcagtggatttctcccggtactgatcctatctctgaaccgtactactgcaaagcctgcagagccgtgtctgaattctgacactgacgaggttgcagatatctgaattttttttttgggtgctgaaagctgcggccactacggacactgatggttacgtgaggccgccggcgccgaagctgaatatatgcagatgtggccgtgcccttactaatggcactttaataaccagccgcactgttagaaagaagcaagcaggacagtgctggctctaactcttaactaactgaattaacttcacatgtgactttgcactaccgtatcttatcttccatgaaagtttttgcaagtgtagtttccagtgctggacgatttaagcctttcagaagatcagatgctgcatgtcaaatatggtaacatggtgtccatctccgtacatttttctcatgcagaaaaaaagaatgaaaagaagaatgaaagaaaggaacattgcgtgcatagggatcaaacattgctgcatgctgagatgagatggatcctgtagatgtagctagcaatggacaggtaaaatttggccatcacagtgtttgatgcttgatctgatctgatctgatccgatctgcttctccagaatgcaccagccgtttgcatggacgcgtctctgtaaccaggtgccagccaagtcactactgtcaagagtcagcatctgtaattctcctcttctctgatctgtccctccctgtggcctgcgtgcgtctctccatccccttcatcacctctctgtctcgcctccacgaccccgttcttttcggctacttcacagttattgttacgggttactcatttcacgtctctaaaaactcatcttctaaaaaaatagagaacatttttaattgtttatatcatatcgcttgttataagttatccgcttactatatttaatttatatttataattgtatagttaatctgctataataatttggtcaataatctgttgtagttttggtcgtgaaaacgggagaaatcgcaacttataattgtatatagataattcactattgggacgcaggctattcatctaatttctctaaaaattcctttttttctaaaagaaaagaataatccttttactgcacaacatcacttatcctaagttatcagttattaaaatatttaattatttactatcataattcagtggataatctgtttcaagcaggtcgtgacaacgagagaaagcaaacagccaatagctcggccgcgggcgtccctttctcgtgcatggctgcaacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0516600, RefSeq:Os10g0516600