Difference between revisions of "Os10g0548850"

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(Created page with "{{JaponicaGene| GeneName = Os10g0548850| Description = U box domain containing protein| Version = NM_001189331.1 GI:297727792 GeneID:9269569| Length = 2591 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0548850|
 
GeneName = Os10g0548850|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0548850

Description

U box domain containing protein

Version

NM_001189331.1 GI:297727792 GeneID:9269569

Length

2591 bp

Definition

Oryza sativa Japonica Group Os10g0548850, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21934704..21937294

Sequence Coding Region

21934704..21934901,21935038..21935442,21935547..21935687,21935779..21935926,21936197..21936318
,21936827..21936867,21937126..21937294

Expression

GEO Profiles:Os10g0548850

Genome Context

<gbrowseImage1> name=NC_008403:21934704..21937294 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21934704..21937294 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccggcgacgcgggcggcggcggcggcggtggagaaggtgttcgtggcgctgccggctgagaaggggaagacgacgctgtcgtgggcgctcggacatttccgcggcagcggagccaagctcgtcgtcacgcatgtgcatgtgccgccgcagacgatccccgtcatgggagttcagtttcatgttagtaacgtgagtccggagcaagtcaaatgtgagaaactagtcattgagaaagaagatgttgtagctggtcttcttgaacttattgcctctcatggcatcaccaagttagtaattgcagctgctgcagacaagcactactcaagaatctctgattcagttctccatgacagggacaagaaagtagaaaccacacaatcagttacacctctcagccaacttttcaagattgatactcctcccagccctgatattggtcagaccattctgcaaccgtcagctgaacaggaacagaatgacaatgagatggaattggggttttctgatgagctcaatgatgcacgcgtagcagctgagaacttgatggagagagctttaagcgaatctttgaggcgccagagagcagatgaacaagtggtttcatctcttcagaaagtcaaacaattcgaggagttgtacttggaggaggtgaaaaggaggaaagaattggaaggagctcttgtcaaagcaaacttagaacttacacggttaaaacaagaaatggacatacctaggaatcaccagagcacaatcttgggggatcgacaagaagtgattaccgataaatttatcttgagacaacaaactgtcgacatgaagagtgatttcggagccacaggacaactaatcaagccacagcaggagtatcttcagttacatcctgaccatgacaatggtgtcagacaaccggaaacgttgctacaccgaaggagcctgactgcattttctccagcatcaactgtaccatcacagtttgataaagactccattccttcccacttcatctgcccgatttctcaggagatcatgagggaaccctgcattgcagcagacgggttcacctatgaagctgaagcgatcatcaattggtttgatgaagggcacgaagtgtctcccatgaccaagcagcctcttgtgcaccgcgacctgatcccaaactttgctcttcgttctgtaatccaagattatacaaggagaaaacagtattcattttcctga</cdnaseq>

Protein Sequence

<aaseq>MDPATRAAAAAVEKVFVALPAEKGKTTLSWALGHFRGSGAKLVV THVHVPPQTIPVMGVQFHVSNVSPEQVKCEKLVIEKEDVVAGLLELIASHGITKLVIA AAADKHYSRISDSVLHDRDKKVETTQSVTPLSQLFKIDTPPSPDIGQTILQPSAEQEQ NDNEMELGFSDELNDARVAAENLMERALSESLRRQRADEQVVSSLQKVKQFEELYLEE VKRRKELEGALVKANLELTRLKQEMDIPRNHQSTILGDRQEVITDKFILRQQTVDMKS DFGATGQLIKPQQEYLQLHPDHDNGVRQPETLLHRRSLTAFSPASTVPSQFDKDSIPS HFICPISQEIMREPCIAADGFTYEAEAIINWFDEGHEVSPMTKQPLVHRDLIPNFALR SVIQDYTRRKQYSFS</aaseq>

Gene Sequence

<dnaseqindica>2394..2591#1853..2257#1608..1748#1369..1516#977..1098#428..468#1..169#atggatccggcgacgcgggcggcggcggcggcggtggagaaggtgttcgtggcgctgccggctgagaaggggaagacgacgctgtcgtgggcgctcggacatttccgcggcagcggagccaagctcgtcgtcacgcatgtgcatgtgccgccgcagacgatccccgtcagtacgtgccctgccccccccccccccccccccttgatcgtcattagatgtttaactgttcggtttaagaatgtgtcgtctaatgatcctccatggctgcctgtcctatcaaggaagctcgtgtacatcgtgaaagattcgtggactgtgactcttttgttccttggggaaagacagcagtaggatgttcatgttgtcctcttttgcaaaatacattctctaaatattaactaagattatcttcttcttttaatctcagtgggagttcagtttcatgttagtaacgtgagtccggagcaagtaagcttgttcagaagaactgagcgtgaaagggtgaataagcttttagacgaatacgtccatcaatgctggaaaatgaaggtgctatccattttccccatcttcctccatttctcctgcagtttcatgcacctggcatcagatttttgtgcagtagttatcattaagatgaccttttggttggttgctgccacattagtagtagtacttttttttttcgcgaacacgcaaaggattgcacgtcaatatattaaaagaatagagtttttgttacacgacgcactcagccagaccggcctatgccaaggaaggaagaaaacaaagataaaaaacaaggaggaaaaggaaaaaaaactcgatacgacggtaactctactccaaacagcgggagggagcagaagtagtagtactaattacattaaccgttgaaactttgcacagaatcaaaatgttttcgaaggtgaagattcatgcttaaccttgatttacaatggttcgtatatttcaggtcaaatgtgagaaactagtcattgagaaagaagatgttgtagctggtcttcttgaacttattgcctctcatggcatcaccaagttagtaattgcagctgctgcagacaagcactactcaaggtacatctagcattacaaaattgtttcggtgtaaagattcaattgtgctatgtatttggtagaattaggaagttcagattatatttatccttctcggtttcagaaagatggacaaaccaaagtccaagatagcaacagaaatcatgcagagagctgacgcatcatgccagatttggtttgtgtgtaaggaacagctaatctgtaccaggtataatctgatgtgttgcacacttttcgatttctgatgactattgaacatcgaaccctcagaatctctgattcagttctccatgacagggacaagaaagtagaaaccacacaatcagttacacctctcagccaacttttcaagattgatactcctcccagccctgatattggtcagaccattctgcaaccgtcagctgaacaggaacaggtttcatcagattatgcagtagatattctgatttttaaaattgtatcttcaaagcatgagtataacatgatagcggtgcttttgttttcagaatgacaatgagatggaattggggttttctgatgagctcaatgatgcacgcgtagcagctgagaacttgatggagagagctttaagcgaatctttgaggcgccagagagcagatgaacaagtggtttcatctcttcagaaagtaattatgctacccatttgactgatttcttcataaatgctaaactaaaagttggcaatactatttattttaaaagattttgataataactctgaacctcccaggtcaaacaattcgaggagttgtacttggaggaggtgaaaaggaggaaagaattggaaggagctcttgtcaaagcaaacttagaacttacacggttaaaacaagaaatggacatacctaggaatcaccagagcacaatcttgggggatcgacaagaagtgattaccgataaatttatcttgagacaacaaactgtcgacatgaagagtgatttcggagccacaggacaactaatcaagccacagcaggagtatcttcagttacatcctgaccatgacaatggtgtcagacaaccggaaacgttgctacaccgaaggagcctgactgcattttctccagcatcaactgtaccatcacagtttgataaagactccattccttcccacttcatctgcccgatttctcaggttttcatatcctcagacaaacaaaatctcaaaattctgtacttttctttacagtaatataaatacttttgacaaattatgttgcttcagaagagacgtttgagttgaccatgttttgatttgcatgtaattgcaggagatcatgagggaaccctgcattgcagcagacgggttcacctatgaagctgaagcgatcatcaattggtttgatgaagggcacgaagtgtctcccatgaccaagcagcctcttgtgcaccgcgacctgatcccaaactttgctcttcgttctgtaatccaagattatacaaggagaaaacagtattcattttcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0548850, RefSeq:Os10g0548850