Difference between revisions of "Os10g0554200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0554200| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001071873.2 GI:297610895 GeneID:434933...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0554200|
 
GeneName = Os10g0554200|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0554200

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001071873.2 GI:297610895 GeneID:4349339

Length

4432 bp

Definition

Oryza sativa Japonica Group Os10g0554200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22213049..22217480

Sequence Coding Region

22213559..22214423,22216463..22216861,22217256..22217389

Expression

GEO Profiles:Os10g0554200

Genome Context

<gbrowseImage1> name=NC_008403:22213049..22217480 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22213049..22217480 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatggcgatggtgttgccggagacggcggcggaggggaaggcgctgacggacgcgtgggactacaaggggaggccggcggggagggcggccaccggcgggtggggctgcgcggcgatgatcctcggggcggagcctccgaccagttcgacgagtccgacgtcgacggcgagaggaagaagatgatgcgcttcttcaactggttctacttcttcgtcagcctcggcgcgctgctcgccgtcaccgtgctggtgtacgtgcaggacaacgtcggacgccggtgggggtacggcatctgcgccgccggcatcctcgccggcctcgccgtgttcctctccgggaccaggaggtacaggttcaagaagctggtggggagccccctcacccaggtcgccgccgtcaccgccgccgcctggagcaagaggtcgctgccgctgccgtccgacccagacatgctctacgacgtcgacgacgccgccgccgccggccatgacgtcaagggcaagcagaggatgccacacagcaaggagtgccggttcctggaccatgcggcgatcatcgacaggtcggcggcggagtcgccggcgacggcgagcaagtggaggctgtgcacgaggacggacgtggaggaggtgaagcaggtggtgcggatgctccccatctgggcgaccaccatcatgttctggaccatccacgcccagatgaccaccttcgccgtcgcgcaggccgagctcatggaccgccgcctcgccggcggcttcctcatcccggcgggctccctcaccgtcttcctcatcgcctccatcctcctcaccgtccccttctacgaccgcctcgtcgtccccgtcgcgcgccgcgccacggccaacccgcacggcctcaccccgctccagcgcgtcttcgtgggcctctccctctccatcgccggcatggccgtcgccgcggccgtcgagcgccaccgcgccaccgcctccgcctccgccgccgccgccgcgcccacggtgttcctcctcatgccgcagttcctcctcgtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgccccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttcttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccggccatggcgcccgcggcggcggctggctcgccgacaacctcgacgacggcaggctcgactacttctactggctgctcgccgtcatcagcgccatcaacctcgtcctcttcaccgtcgccgccagggggtacgtctacaaggagaagcgcctcgccgacgccggcatcgagctcgccgacgaggagaccatcgccgtcggccactaa</cdnaseq>

Protein Sequence

<aaseq>YGDGVAGDGGGGEGADGRVGLQGEAGGEGGHRRVGLRGDDPRGG ASDQFDESDVDGERKKMMRFFNWFYFFVSLGALLAVTVLVYVQDNVGRRWGYGICAAG ILAGLAVFLSGTRRYRFKKLVGSPLTQVAAVTAAAWSKRSLPLPSDPDMLYDVDDAAA AGHDVKGKQRMPHSKECRFLDHAAIIDRSAAESPATASKWRLCTRTDVEEVKQVVRML PIWATTIMFWTIHAQMTTFAVAQAELMDRRLAGGFLIPAGSLTVFLIASILLTVPFYD RLVVPVARRATANPHGLTPLQRVFVGLSLSIAGMAVAAAVERHRATASASAAAAAPTV FLLMPQFLLVGAGEAFTYMGQLDFFLRECPKGMKTMSTGLFLSTCAIGFFFSTLLVTI VHKVTGHGARGGGWLADNLDDGRLDYFYWLLAVISAINLVLFTVAARGYVYKEKRLAD AGIELADEETIAVGH</aaseq>

Gene Sequence

<dnaseqindica>3058..3922#620..1018#92..225#atcacagcatccatcgccgccggccaccaccaccaccaccgccgccgccgtcttactctctctgtctcgagctcgagcttgttgttgttgatatggcgatggtgttgccggagacggcggcggaggggaaggcgctgacggacgcgtgggactacaaggggaggccggcggggagggcggccaccggcgggtggggctgcgcggcgatgatcctcggggcggagctgttcgagcggatgacgacgctgggcatcgccgtcaacctggtgccgtacatgaccgggacgatgcacctcggcaatgccgccgccgccaacacggtcaccaacttcatcggcacctccttcatgctctgcctcctcggcggcttcgtcgccgacacctacctcggccgctacctcaccatcgccatcttcgaggccgtccaggccaccggcgtgatgatactcacgatctccacggcggcgccggggctgcggccgccggcgtgcggcgacccgaagggggcgagcgcggagtgcgtggcggcggacgggacgcagctcggggtgctctacctggggctctacctgacggcgctgggcacgggggggctcaagtccagcgtctccggcttcggctccgaccagttcgacgagtccgacgtcgacggcgagaggaagaagatgatgcgcttcttcaactggttctacttcttcgtcagcctcggcgcgctgctcgccgtcaccgtgctggtgtacgtgcaggacaacgtcggacgccggtgggggtacggcatctgcgccgccggcatcctcgccggcctcgccgtgttcctctccgggaccaggaggtacaggttcaagaagctggtggggagccccctcacccaggtcgccgccgtcaccgccgccgcctggagcaagaggtcgctgccgctgccgtccgacccagacatgctctacgacgtcgacgacgccgccgccgccggccatgacgtcaagggcaagcagaggatgccacacagcaaggagtgccggtaagttcaccacccactctgcatctttagtattcagataaagtttttttacattattaccccaacacaaaactagccggtaagttcagatgaattttgatgaaattaatttgaacgagttatatataggatcaagatgcatatgcatcattcatgtgggccacgcattgacacaaatctagtaatagtgctactagtagtcagttttaatttagcatatatagcaagccaggttgtaggaaaatgaatgaaattaaattaaattcataatatatattctacctccatcccataacaacttagtagtagctaggagtagagaacgagacatatactattactacgaatgtgttcagatttatagtattagaatatatttcatcatgtattagattgctatgttacgagatggagcgagtatattcagggagttcatgattggaggcacgcactgtttggcccgttgctgtgacatttgcaaccacacccctcttaagaaaatcatcttcattttgacagctgaaaccactccagccactcactgtcatatatagacagatagatatacggtctcgcaagcctgtaggtgtgtatatacttggaccagcactactagatatctaaaccattaaggtaggtcaaatcaagttatttttaggaagcctaataagtagcccagtcccaacgacgtatggtcgcagccatctgccaggtatatagctagagtcgacatacacatgcccataagtaaattaaagtggagtacgtgcagaaagcaaaggccctttgaccctgaacattaacaaagtcggtagaggcaagattgattctagcatgatacgatggacgagtcacacagaatcaaaaccaaagcagagtaggagttgctaagtgaagatgagcactgggcgaggtagcacctcctcctccacatagtgacatcccatgcgtacataacacagtggcttattagccagtacatgtacaaacacgaagatgcatttgcatgtgccgcgacccagtgaccgatagcttcagctattctcccaacaaattcctcctttctccagtggaaactagcagagccctgaacctgccttggtcacgggtcgcggcagcatctcgcgtgacaaatatcacatgcgacgcggcgctgcatacgcacgcacgcccgtgtgcgtgtgattgatcagctgcttggaacttctccctcttgcctatctcaactcatctagctcttcccgcaaaaaaaaaccctcatctagctctttgcgtctgcgtgatgcaacgtacgtacgacacaccggccgctacaaagacttggatcttgcagtggcggtagctaccgcgctgctacgtgcgcatggctgctcccttgtttgcacgcgcctactataccttcctcttacttaagtccagtgactattagatcttcccgcaaaagaaaaaaaaactgttagatcactaatgtatgagactgtagcaaagtaaatttatatgtcagcgactcaaaattaagtaacttaagtcgaagaatccgcatccatgaataaacattgtgtggtttatcttagctaacacaattctaactcatctcaaaatttaaatgcattttttaggtttttaatatttgattcatccatttctgcctttggaaaaataacatgacaagatgagaataatctataatctagttgatgtcacctgatgatctgaagtagcactacaataatccgtaattttttggtggtcaaaaaccatcaagtataacatgaaaaccgccaaaattcattattctatcggccgtctagggatattcatatttgttggctgctaaccataagagaatatttttttgttagtcggaccactaagcaaattaaaaatattacgaactttataactttgtcggtttggaccgataagaatatatcttactttggctgccaagaaacaccacaagaaaattacttatttttgaccgttagaaccaccaaggtaataatcattgacgtgtttggtttgtaatatgggtgcaggttcctggaccatgcggcgatcatcgacaggtcggcggcggagtcgccggcgacggcgagcaagtggaggctgtgcacgaggacggacgtggaggaggtgaagcaggtggtgcggatgctccccatctgggcgaccaccatcatgttctggaccatccacgcccagatgaccaccttcgccgtcgcgcaggccgagctcatggaccgccgcctcgccggcggcttcctcatcccggcgggctccctcaccgtcttcctcatcgcctccatcctcctcaccgtccccttctacgaccgcctcgtcgtccccgtcgcgcgccgcgccacggccaacccgcacggcctcaccccgctccagcgcgtcttcgtgggcctctccctctccatcgccggcatggccgtcgccgcggccgtcgagcgccaccgcgccaccgcctccgcctccgccgccgccgccgcgcccacggtgttcctcctcatgccgcagttcctcctcgtcggcgccggcgaggcgttcacctacatgggccagctcgacttcttcctccgcgagtgccccaaggggatgaagaccatgagcacgggcctcttcctcagcacctgcgccatcggcttcttcttcagcacgctgctcgtcaccatcgtccacaaggtcaccggccatggcgcccgcggcggcggctggctcgccgacaacctcgacgacggcaggctcgactacttctactggctgctcgccgtcatcagcgccatcaacctcgtcctcttcaccgtcgccgccagggggtacgtctacaaggagaagcgcctcgccgacgccggcatcgagctcgccgacgaggagaccatcgccgtcggccactaatagtgaccgatcgatgcgtcagcatgacatacgcaagctagctaccagttagctgcacgcgtcgtgtatgtacgtcgtccttgtaataactttggttttttcttttcttgtattttgaatttttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcgtgtattgtattcgacgtatttcgccgggtataatttgggtgtattctcatcgcacgtataattaattaattaaccaactacgtaataactacgtggagttaattaatgtgtacgtacgtggggtgtatgtagaaggaagatatatacgtacgtagggaagggggagatttatacggcaatgtataatttgccacaaagtgtattactgatgtatatgtttatacgtcttttatactgatagtgtgcagggcaggaggaaattcctgcatatgcgaggtgcgggcgcacctctcaatctgatcaataaattaaacacaaaaaagtttttgttcatatgag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0554200, RefSeq:Os10g0554200