Difference between revisions of "Os10g0559800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0559800| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001071906.1 GI:115483407 GeneID:4349372| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0559800|
 
GeneName = Os10g0559800|

Revision as of 21:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0559800

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001071906.1 GI:115483407 GeneID:4349372

Length

3961 bp

Definition

Oryza sativa Japonica Group Os10g0559800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22494854..22498814

Sequence Coding Region

22494943..22495281,22495389..22495529,22495900..22495986,22496090..22496149,22496249..22496348
,22496446..22496759,22497108..22497476,22497848..22497964,22498160..22498394
,22498482..22498657

Expression

GEO Profiles:Os10g0559800

Genome Context

<gbrowseImage1> name=NC_008403:22494854..22498814 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22494854..22498814 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaacccgccatggaagggacggtgcagggtggaggaggaggaggaggaggagcacaagaacctcgcggacagtacggcggaggcggcaagaacggcggcgacgcctccccgcgcaagcatgccgctgccgctgccgctgccgccttgccgcgacaccggcgatccaagagtgcttcttccgatcggagcctggagccatgcaagcacgcggcgttgcacgatcagcgctgcacccaagcagcacaggcgacgccgagctctcatcaccaaccggacgcgacgacgaggaaatcccacgccgccgccgccgccgccgccgagggctcctccatccaccatgtactgacgagagatcgcagcagggcgagcgcgtcgccgaaccatcgcgtctcgctggagaatgatatcaggcagctgcagcttaacctgcatcaggagaggtcgatccggatcatgcttgaccgggcgattggccgcgcatccagcactctgtctcctggccacatgcatttcccagctcagacaaaggaactgattgcagagattgaattgcttgaagaggaaatcgcaaaccgtgagcagcatgttcttaccctctacagaagcatcttcgatcaatctgcgtctggagcatcctcagggcagagttctggtctttcttccccagcgcataccaagagtatcagctctagaacaagacggcatccgagcataatatcgagtgcattttgctcatctaagaagctcccgctccaacctttccaaatcatgacatcggtatcggagtcggggagatcgaagagtatgctgaaaaccaagattaagcatgaatctttctcaagtgaaacattggatattcaccctgcaaccttcccaccagatccaaggaagcttccttattcaggaagtagttctttgactcggaccctgaaagatcacctctaccaatgtccaagcaaaatatccgaagaaatggttagatgcatggcctccatatactgtcttcttcgcaccgagtgtcccgaaaaccctgaaaaggtccgttcaccattcttgtcgaggtcatcaacaaatgtcattcttcctcggagaggaaacggagaggacactaatttgtcaaacaccaaatgtacggtggaagtatcttcaatatcagctgataagaatcacatgccagatgtctcttatgcaattacgcactacaggttgcttgtggagcagcttgaaagggttgatctgagtatgtcagaaaccaatattaaattggccttctggatcaatgtgtataattctcttgtcatgcatgcatatctagcatatggcattccaaacagttctctgaaaagaatggctctatttcacaaggctgcctacaatattggaggccatgcagtcacggccaattccatcgaacacgctctactatgctgcagatctccacggattggtcgttggtttgaatccatactgtcgacggcgatgcggaagaaatgcgcagatgagaagcaactcgtccagctcaaattcggcctgccggactgccagcctctcgccctgttcgctctgtgcacaggagcttcatctgatcccatgctgaaggtgtacacggcgaagaacatcagtgaggagctggagcgtgcgaagcgggagttcctgcaggcgagcgtggtggtgaggaagtccaagaaggtgttcctgccgcgcctcgtcgagcggtacgcccgggaggccggcctcgccggcgccgacgagctcctcgcgtgggcgcgcgacaacgccgacgcccgcgccacccaggacgccatccagcggctgtgcgtcgacgccggcggcggccggaggaaggcagcgcaggccgtcgagtggctcccctacaacgccaggttccgctacgccttcccccggaccatggtcgacaagccactcttctga</cdnaseq>

Protein Sequence

<aaseq>MAQPAMEGTVQGGGGGGGGAQEPRGQYGGGGKNGGDASPRKHAA AAAAAALPRHRRSKSASSDRSLEPCKHAALHDQRCTQAAQATPSSHHQPDATTRKSHA AAAAAAEGSSIHHVLTRDRSRASASPNHRVSLENDIRQLQLNLHQERSIRIMLDRAIG RASSTLSPGHMHFPAQTKELIAEIELLEEEIANREQHVLTLYRSIFDQSASGASSGQS SGLSSPAHTKSISSRTRRHPSIISSAFCSSKKLPLQPFQIMTSVSESGRSKSMLKTKI KHESFSSETLDIHPATFPPDPRKLPYSGSSSLTRTLKDHLYQCPSKISEEMVRCMASI YCLLRTECPENPEKVRSPFLSRSSTNVILPRRGNGEDTNLSNTKCTVEVSSISADKNH MPDVSYAITHYRLLVEQLERVDLSMSETNIKLAFWINVYNSLVMHAYLAYGIPNSSLK RMALFHKAAYNIGGHAVTANSIEHALLCCRSPRIGRWFESILSTAMRKKCADEKQLVQ LKFGLPDCQPLALFALCTGASSDPMLKVYTAKNISEELERAKREFLQASVVVRKSKKV FLPRLVERYAREAGLAGADELLAWARDNADARATQDAIQRLCVDAGGGRRKAAQAVEW LPYNARFRYAFPRTMVDKPLF</aaseq>

Gene Sequence

<dnaseqindica>3534..3872#3286..3426#2829..2915#2666..2725#2467..2566#2056..2369#1339..1707#851..967#421..655#158..333#taatttcgtcgccgccgtctcgcgcagctgccaggccaccactgtgcgcgcgatgctctttgccccccgcgaagacgagcagcggcagcagcttccatgcttggcgattcgatgccatgtaggaagacgaagatgatgaagctagcgtagcctagtgatggctcaacccgccatggaagggacggtgcagggtggaggaggaggaggaggaggagcacaagaacctcgcggacagtacggcggaggcggcaagaacggcggcgacgcctccccgcgcaagcatgccgctgccgctgccgctgccgccttgccgcgacaccggcgatccaagaggtgatctttgatttctctcttcacatttgcagtgcaagtttgggatttttaacttgtgcctaggaatggttactgttcttgagccagtgcttcttccgatcggagcctggagccatgcaagcacgcggcgttgcacgatcagcgctgcacccaagcagcacaggcgacgccgagctctcatcaccaaccggacgcgacgacgaggaaatcccacgccgccgccgccgccgccgccgagggctcctccatccaccatgtactgacgagagatcgcagcagggcgagcgcgtcgccgaaccatcgcgtctcgctggagaatgatgtgagttttttttctttcgcgaacacgtaaaaggattgcaccgtcaatatattagaagagaggagaatgatgtgagtgaggatcgtcatgcaaaatagcttaagccatgccgatttttgcctactgtgcagttctgaaaatgatgattgattgattgattgttgttatgtgtgcgttgtttctgaattctagcagatcaggcagctgcagcttaacctgcatcaggagaggtcgatccggatcatgcttgaccgggcgattggccgcgcatccagcactctgtctcctggccacatgcatttcccagctcaggtgtgatggttttcctgcctctgcagaatttccccttgcgactgttaattgattcgtgtgctacactgagcagataaattgagcgttttaattgtgcttgcaatgtctcagcaatgctgttgcaagtttaattgtatctccttggataactgattaatcctctttaaattccttttttttcccatgaaaaatcggtttaagggaacatggtaattcagttatgatactagacagacatacttctgcattaatgggatgccttgtaatttcagtaaagcaattattaaatcaagaggggacaaacggataagtgctggctccatcattttcaagttattgtgttcaataagtggtttttgttgtccctgcagacaaaggaactgattgcagagattgaattgcttgaagaggaaatcgcaaaccgtgagcagcatgttcttaccctctacagaagcatcttcgatcaatctgcgtctggagcatcctcagggcagagttctggtctttcttccccagcgcataccaagagtatcagctctagaacaagacggcatccgagcataatatcgagtgcattttgctcatctaagaagctcccgctccaacctttccaaatcatgacatcggtatcggagtcggggagatcgaagagtatgctgaaaaccaagattaagcatgaatctttctcaagtgaaacattggatattcaccctgcaaccttcccaccagatccaaggaaggtaaaacatctgagaagaaaatcaacctttttacaagcatttagcaaaatcctcaaaacgactatcatatttatttctgtgtatgtcatgctgccaatttttaacctagtcttttatatgcccttttgaggaatcataggtgctagtcaatcatcagccgaaaatctattttagggtgcatatttcatgttcattgtgtttgattcagaaacatgccacagtgatgctttattccccagatttataccttgagcctgttggttttaattcagaagatgttctaaaagcagaaaatcacatattggacttatcttgactattgttttgccttttcttccttaaaaaaagcttccttattcaggaagtagttctttgactcggaccctgaaagatcacctctaccaatgtccaagcaaaatatccgaagaaatggttagatgcatggcctccatatactgtcttcttcgcaccgagtgtcccgaaaaccctgaaaaggtccgttcaccattcttgtcgaggtcatcaacaaatgtcattcttcctcggagaggaaacggagaggacactaatttgtcaaacaccaaatgtacggtggaagtatcttcaatatcagctgataagaatcacatgccagatgtctcttatgcaattacgcactacaggttggtccaaaataatataatctacacatcatgaaaacataatatatatgctcctgacaataacataacaaatttcactgtgttgttttgggtgcaggttgcttgtggagcagcttgaaagggttgatctgagtatgtcagaaaccaatattaaattggccttctggatcaatgtgtataattctcttgtcatgcatgtaattgctggatactctacagtggttactgttattctttatacttatacttttaatgctcttactgcttatattgatttgcatataattcgcttgcaggcatatctagcatatggcattccaaacagttctctgaaaagaatggctctatttcacaaggtgaaaaagatattctagtaatatctattcctgcaatgtaagcatactgtgcttgctaccgaattattgagtttttcacttacaaataaatcaccgtaagcaggctgcctacaatattggaggccatgcagtcacggccaattccatcgaacacgctctactatgctgcagatctccacggattggtcgtgtatgtatgacttgcactttcatgctgaattttaacttgtgcttcagattgttcataagaagtatagataatttcaggctaaaattctataaatgaacaaaaaaaatgaaatcatttttcctaaatgagtatgtcataagtatatttgacattgattctgcacttctgagttccaaaccaagatcctaaatttactgtttgactggcctactggtctaggtggtctttatatgaacatcaatgaaacaaaccaaagaacatcacttatgataactgatacgaatttcactgccatgtagtacatagcaatcagctaagttaggagtagcagagaaggcacaatactgatgactcaccctcatacttgcagtggtttgaatccatactgtcgacggcgatgcggaagaaatgcgcagatgagaagcaactcgtccagctcaaattcggcctgccggactgccagcctctcgccctgttcgctctgtgcacaggagcttcatctgatcccatggtaattgtcgatttgacactgcacaacaaaaccaccgtgcagctccactgcttgttattgttctgaactctgaagaaaatggcaagctaaaaagaaaaatgtttcagctgaaggtgtacacggcgaagaacatcagtgaggagctggagcgtgcgaagcgggagttcctgcaggcgagcgtggtggtgaggaagtccaagaaggtgttcctgccgcgcctcgtcgagcggtacgcccgggaggccggcctcgccggcgccgacgagctcctcgcgtgggcgcgcgacaacgccgacgcccgcgccacccaggacgccatccagcggctgtgcgtcgacgccggcggcggccggaggaaggcagcgcaggccgtcgagtggctcccctacaacgccaggttccgctacgccttcccccggaccatggtcgacaagccactcttctgagcaagaaacaagcgtacattctgatgctccaatgtttcgcgctgcattgttgttttgtgatcttgagatgaagaattgaagatgagatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0559800, RefSeq:Os10g0559800