Difference between revisions of "Os10g0563400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0563400| Description = Conserved hypothetical protein| Version = NM_001071933.1 GI:115483461 GeneID:4349400| Length = 3072 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0563400|
 
GeneName = Os10g0563400|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0563400

Description

Conserved hypothetical protein

Version

NM_001071933.1 GI:115483461 GeneID:4349400

Length

3072 bp

Definition

Oryza sativa Japonica Group Os10g0563400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22699395..22702466

Sequence Coding Region

22699450..22699591,22700039..22700127,22700276..22700351,22701006..22701055,22701138..22701449
,22701601..22701639,22701975..22702163

Expression

GEO Profiles:Os10g0563400

Genome Context

<gbrowseImage1> name=NC_008403:22699395..22702466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22699395..22702466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagctcgcgggagcggaggcttccgccgccggcgtaccggatggagaaccccttcagcgtgaaggtgctccaggtcttcaccggcttcggcgtcggctgcggcgtcggcatcggcgtcggccgccccatctacctaggtgtcataccggggcttaatcaagttatgaccgcaacaaggggcgcaacggatgccttttcaggcgtaacaaggcatgttaattccgctctaaggaagtcagggttaaagaacattgaagcaggcattggctgtggagttggtataggccacggttttggaataggaattgcattgaagccacaagtaattcatggaattcagtcaaccgttggagaacttatgtctaagttcacttctaggctgaaggataccccaactttgtcatctgcaccaaatatggctggttctgtgcctagcaatggacaagctcccaatggtgtgtccattgatctaaaggctaagaccacgaaaagtaatttccaccatacaagtaatgaaacatcacaagtaaaaccagctcctgggttgcaaagccagcatggaatgcaaccagatatgactgaaagtcggactgaaaaggttgttgccaactttctacagtctcccctgttccaggatgaaaccaagatggacatcagagatgtggctagaaattcacatgggatggataatgtgctggaattgttgctgaagcaccaaagaattattgacgaactgcgggacgagaacgacaagctccgtcaaatgctcatagaagaactcaaggtttcaccttccaagttacaattagatcataaaaatggagtgaaggcctacaacccatgctcggactgctttgattgccggaggcgaagtcgaaaaacaagaagatga</cdnaseq>

Protein Sequence

<aaseq>MASSRERRLPPPAYRMENPFSVKVLQVFTGFGVGCGVGIGVGRP IYLGVIPGLNQVMTATRGATDAFSGVTRHVNSALRKSGLKNIEAGIGCGVGIGHGFGI GIALKPQVIHGIQSTVGELMSKFTSRLKDTPTLSSAPNMAGSVPSNGQAPNGVSIDLK AKTTKSNFHHTSNETSQVKPAPGLQSQHGMQPDMTESRTEKVVANFLQSPLFQDETKM DIRDVARNSHGMDNVLELLLKHQRIIDELRDENDKLRQMLIEELKVSPSKLQLDHKNG VKAYNPCSDCFDCRRRSRKTRR</aaseq>

Gene Sequence

<dnaseqindica>56..197#645..733#882..957#1612..1661#1744..2055#2207..2245#2581..2769#acaattcccatcctgccgccggcggctaccgcgggcggtgctcgactcgacctcgatggcgagctcgcgggagcggaggcttccgccgccggcgtaccggatggagaaccccttcagcgtgaaggtgctccaggtcttcaccggcttcggcgtcggctgcggcgtcggcatcggcgtcggccgccccatctacctaggtatagcaaagcttccgaagctaagtgattccgccgtttcctggatagtttgggtctggggattgggatggacatcgatccggtcggccatgagtcggtgggtttcgcatttcgtcgagcggctgagggttgtgattattgcccgcccctggcttgtggccatttcgtcgaacagttcgtgtcgtgtgtcaccgcacatagttccattgcttgaactgtggataagatagtagatgataaaaatgggatgtttgctggtgcataggaatacagtttacttttagttaagtctactagtctgtcgaactgacactggtattgtgcacttcccctcttcacagactacagaccacagttactgccccatactgccatactatagggcatttagggctcgatgattaatttcaatgactttaagtagttggcttctgtcttgatggataggtgtcataccggggcttaatcaagttatgaccgcaacaaggggcgcaacggatgccttttcaggcgtaacaaggcatgttaattccgctgtaagtaaagataatccttgtgtaaccacgaataattaggtgccaatcacgttagtaggatacttttgacttatgttaatctaattatgtattttggacttgtctcgatctaattctgctgtttttcttccttatttttgtgctctagctaaggaagtcagggttaaagaacattgaagcaggcattggctgtggagttggtataggccacggttttggaataggtacatattgcagcttttccatgtagttagtcctctaaattttcttttggtgctgtcctagtaggaactattgtcagtcaaggtcatcttttgtgcttgatatcctcatatcttgagcatatctttcctgtttattacttttgcagtgatcacgccattttttttaacatttgtattatcagaaaccaaaacatgtgttcttgctaggcggtggcaatgtcatgctttattcatagtttcttttttatacagcaatcagattaaatttaggcacctggtgaattggtgatactttgattcttttgtatgttttttattttcattgactgctgcagcagatctatcagttcatctaatctagtccaaaaatgaagtgataattgaggggactcatttaatagaaccacatttcatactttcgcacctagcatactagcacactccctaaataggatccatggaaatatctataatatctgcaacgcttccaggtcattgtttttgttagtagaaatcatcagctgccaagcctctgctattttactcttatttatattctatatcaaatgctacacatctgttaaatatttttcttgcataagcatgcaaacttgtttgatctgaagctgaaccattaagtatctcaatactcaggaattgcattgaagccacaagtaattcatggaattcagtcaaccgttggagtacaaacctaaactttgatcacctgaatttttctttgtttccctttttggtgtatgaattctaagggaactttttctctaggaacttatgtctaagttcacttctaggctgaaggataccccaactttgtcatctgcaccaaatatggctggttctgtgcctagcaatggacaagctcccaatggtgtgtccattgatctaaaggctaagaccacgaaaagtaatttccaccatacaagtaatgaaacatcacaagtaaaaccagctcctgggttgcaaagccagcatggaatgcaaccagatatgactgaaagtcggactgaaaaggttgttgccaactttctacagtctcccctgttccaggatgaaaccaagatggacatcagagatgtggtatgcactaaaacattacctcaaatatctaacctgcactatatatattgcacaattatgggttgcccctatgcctctcgctgctaaaatttgcttagtcagacatgttattcatggactttgaacactcttttctttgttctttttgcaggctagaaattcacatgggatggataatgtgctggaattggtgagtccagttatacctagtgtttcttatgctatactccataatcccactcttgcttggttgttccatcctcattctttgaatttgatatgttctactcacgccatcccatacagcccccttaacatgaagcgcctctaatagtctaatatttttaacaagtaatgtagcattaaaacatgatttcacaagtaaagttctataacagaattttgtcttgcatttgttttaaaacttagttctgtatagtgtacagaatggtccacggttgtctttctacctatgtttatgccttcactgctgtctgctaactgagcttttcatttctgacccagttgctgaagcaccaaagaattattgacgaactgcgggacgagaacgacaagctccgtcaaatgctcatagaagaactcaaggtttcaccttccaagttacaattagatcataaaaatggagtgaaggcctacaacccatgctcggactgctttgattgccggaggcgaagtcgaaaaacaagaagatgataatggaattgcaggattgcattttggctattttcgcaatcctttgcaatttcttggattcttcagtagctaaatagttcatcggattagctttcgacataatatcctcagcagaagatccactcttgttgttcaggccagttatgttacctatctcctgaacattcgtgaacacttgatccaattgatgcgttacttctgtgctgaacatgcgcagactgatagcatcacagcagtacgtgattttagttctctctttggattctattcaatgcagtcaaatctaaaatcattagtagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0563400, RefSeq:Os10g0563400