Difference between revisions of "Os10g0565300"

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(Created page with "{{JaponicaGene| GeneName = Os10g0565300| Description = Conserved hypothetical protein| Version = NM_001071951.1 GI:115483497 GeneID:4349418| Length = 6942 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0565300|
 
GeneName = Os10g0565300|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0565300

Description

Conserved hypothetical protein

Version

NM_001071951.1 GI:115483497 GeneID:4349418

Length

6942 bp

Definition

Oryza sativa Japonica Group Os10g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22788251..22795192

Sequence Coding Region

22788611..22788952,22789317..22789425,22789543..22789595,22789704..22789904,22790013..22790288
,22790368..22790526,22791345..22791704,22791783..22792004,22792822..22792948
,22793742..22793878,22793970..22794147,22794520..22794686

Expression

GEO Profiles:Os10g0565300

Genome Context

<gbrowseImage1> name=NC_008403:22788251..22795192 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22788251..22795192 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaatgatacagatacaggtgctggactattggaacttattgttgaacttggagttgttggagtctctttgattgatcataaaccgagagagcttttgtacttacatctgcagaagctttttatttcatacatgactggttacaattctggtaccactagcaggtttaagttaattattggccatatgcaactagataatcagttgccattgtctataatgcctgttgctttggcaactgagagcatgcctgactcaaaccatcctgtatttaaagcaaacatcgccgtaagcaatgtaacttcaaatggtattcaagtctatccacatgtctatatccgggtaactgatcaaacatggaggttgaatattcatgaacctattatttgggcattggttgatttctacagcaatcttcgttttgtcagcaccaacaacatctcaactgtaacagaagtggatcctgagatacgaatagagcttgttgatatatcggagataaggttgaaaatatctctggaaactgcgcctactcaaagaccacgtggtgtccttggcatatggagccctgtcctatcagctgtaggcaatgcacttaagattcaggtgcatctgcgtaaggtcatgcacagaagtcgttacatgcggaagagttccatcattcccgcaatcacgaaccgaatcaagagagatctgatccacaatcctctgcacctaatattttcagtagattttcttggagtgacaaaatcaactttgtcatcacttagtaaagggtttgcagagctctctactgatgggcaatttcttcagctgagatcaaagcaggtttggtcaaggagaataactggtgttggtgatggactagttcaagggactgaagcatttgctcagggtttggcttttggggtttctggtgttctaagaaagccagtcgagagtgcccgacagtatggtgcaattggcattgcacatggtcttggccgtgcttttgtggggtttattgtccaacccttaagtggggcctttgatttcttctcattgacagttgatggaattagtgccagctttatgagatgcgtggatattctgaataataaacatgtccctcagaggattagagatcctcgtgctatacaccgagatggtataataagagagtacgacaaagtacaagctgcgggccagatggccctttacctagcagaggctagcagatattttgcatgcacagatttatttcgggaaccttcaaagtatgcatggtcagattactatgaagatcattttatcgtacaaaatcagaaggttgctttggtaacaaacaaacgagtgatactgcttcagtgcgtggatctagataaaatggataagaagccttcgaaaatactttgggacgttccttgggaagatgtgcttgcattggagctggcaaaagctgggtatcaaaggccttctcacgtaatcatacatctgaagaattttaggagatctgaaaactttgtaaggcttataaagtgcaacgttgatgaggagcatgaacctcaggctcttctactttgttcttcaattcgaaagatgtggagatctcaccaggcagatatgaaagttgtacccttgaaggttcctgggggccagcacgatgtatatttcgcatttgatgaagatatgagggagttccacagttttgctaggcctttgctaagcccaaggggagcagcaagtaatgttgaggagcgactcattaacgatacagttaacttccagaacatgtggagcagtgaacaagaaattcgaagcagatgcaaactactttcaaagcaggttgcagatgatggaagggtgtttagtatctggaggcctctctgccctagtgggtatgtctcaatcggagatattgctcatgttggcattcatccaccacatgttgctgctgtctacaaaaatgtgggtggaaatttcgctctgccacttggctatgacctggtttggagaaactgtggtgaggattacaggaatcctgtatcaatatggtttccacggccacctgaaggatacgtagctctcggatgcgtggctgtatctgcttttgaggagccccctctcgactctgccttctgtgttagtgagagatttgcggaagatgcagtatacgaggagcaaattgtatgggcttcgtcagatgcctacccatggggatgctatgtttaccaagttcagagcaagtcactgcaattcatggcgatgcggcggccaaaagaagagtgtgagctaaaacctaagaaggtatcagagtcttatgcccagcaagcattggagaggtcctga</cdnaseq>

Protein Sequence

<aaseq>MQNDTDTGAGLLELIVELGVVGVSLIDHKPRELLYLHLQKLFIS YMTGYNSGTTSRFKLIIGHMQLDNQLPLSIMPVALATESMPDSNHPVFKANIAVSNVT SNGIQVYPHVYIRVTDQTWRLNIHEPIIWALVDFYSNLRFVSTNNISTVTEVDPEIRI ELVDISEIRLKISLETAPTQRPRGVLGIWSPVLSAVGNALKIQVHLRKVMHRSRYMRK SSIIPAITNRIKRDLIHNPLHLIFSVDFLGVTKSTLSSLSKGFAELSTDGQFLQLRSK QVWSRRITGVGDGLVQGTEAFAQGLAFGVSGVLRKPVESARQYGAIGIAHGLGRAFVG FIVQPLSGAFDFFSLTVDGISASFMRCVDILNNKHVPQRIRDPRAIHRDGIIREYDKV QAAGQMALYLAEASRYFACTDLFREPSKYAWSDYYEDHFIVQNQKVALVTNKRVILLQ CVDLDKMDKKPSKILWDVPWEDVLALELAKAGYQRPSHVIIHLKNFRRSENFVRLIKC NVDEEHEPQALLLCSSIRKMWRSHQADMKVVPLKVPGGQHDVYFAFDEDMREFHSFAR PLLSPRGAASNVEERLINDTVNFQNMWSSEQEIRSRCKLLSKQVADDGRVFSIWRPLC PSGYVSIGDIAHVGIHPPHVAAVYKNVGGNFALPLGYDLVWRNCGEDYRNPVSIWFPR PPEGYVALGCVAVSAFEEPPLDSAFCVSERFAEDAVYEEQIVWASSDAYPWGCYVYQV QSKSLQFMAMRRPKEECELKPKKVSESYAQQALERS</aaseq>

Gene Sequence

<dnaseqindica>6241..6582#5768..5876#5598..5650#5289..5489#4905..5180#4667..4825#3489..3848#3189..3410#2245..2371#1315..1451#1046..1223#507..673#ataaaagctgagatacgtggctatgaggaaggttcaagattcttgattgtatttcgtttggggccatcagatggaccaatcaggtagtaagagattttaatggcttgcataaacatgattcttatttatctaactatgaccctactatcatgtctgcatgcaggattgagaaccggacaagtagtacaactatcagtgctcgacagtctggtttgggagaggattcttggatacaagtgaaaccactttcaaccaaaaaatattcttgggatgacccatatggacatacaacttttgatgttagcatccagcaaggagatgttactttctttcagtgtgttgacctggaaaaccctgatgaatgttccgctggttttagagaacatcacctcaagctcagtatagttgagactgctgatgttaagattttgaagtttgctgattacccaagaagacaagagggagggtacagatctgatctgggtgatcaccaagcctcgccagttatgcaaaatgatacagatacaggtgctggactattggaacttattgttgaacttggagttgttggagtctctttgattgatcataaaccgagagagcttttgtacttacatctgcagaagctttttatttcatacatgactggttacaattctggtaccactagcaggtatagtgacgactacatcaactatgtttgtacttatgcatggttgatgaaaatatttttttttcactaaagcaaagagcatatccatcagttggaaaattctgaaaatacttattgctttgaccttggttgttcattttgtaaaattatttagtccttgaagctgacgttttgacaaaagatgtggtaaagacagattcatagctctagtgatctagtcataccagagcagctgttttgtagccgtcaatctgaataatggttaaatggttaagaatgagcatagcttggaaacaagtctcttagctcctttgtcttatgctattgttgtatgcaccattgagttttttctgatgatatataatatttcaggtttaagttaattattggccatatgcaactagataatcagttgccattgtctataatgcctgttgctttggcaactgagagcatgcctgactcaaaccatcctgtatttaaagcaaacatcgccgtaagcaatgtaacttcaaatggtattcaagtctatccacatgtctatatccgggtaatgttgttgctgagttttctgagaagcaaagctatacaccatttattataatactaaagatggaacattcttggatttttttttctaggtaactgatcaaacatggaggttgaatattcatgaacctattatttgggcattggttgatttctacagcaatcttcgttttgtcagcaccaacaacatctcaactgtaacagaagtggatcctgagatacgaatagagtaagcaagtcacgtcactgttaaaatttagtagcaaatgttagatgtagaatcttgttgctgacgtatctttatatttgagttgtttctgttattaatgcagagttgtgcactaataattagcaccaaaatccgaagttctggatttgcagaacattttatcctgatatagatagatggtttacgttttctacgaacagcactcagatcatgatttaagatgttagtttgaagactggctcagtaacatagtttctctgtgcttgtaaaaatagcacttttgccagtttgatttccttcacatatcaatttgattccacttagaaagaaatcagcatttccatgttatggtgggtggtgtatgacttggttgcagtttcattttctttcgtagaatcctttgtgctgaagaatgggtgtgatatgctactctttgattatggatccagataaatctaggcccgtatatagccttcacccttagaaaaggacaagaaagatgccagctgatcttccttttcttttttgttggccactctacctattctgctctaaacaagcaccactccacatctccactttgtgtgttcattctactcccacctaatgcagtggtagaactgtacaagaatcaataaccataaaacgcttgctaactatttgccttcaggtagtctgctccattgtagtggtcttcttatttagttcatatgataacttcttttagtacacatatgtttgagttaacacagataccacatggtatactgacaaattattttacaaattacaggcttgttgatatatcggagataaggttgaaaatatctctggaaactgcgcctactcaaagaccacgtggtgtccttggcatatggagccctgtcctatcagctgtaggcaatgcacttaagattcaggtaaaatgatgttatttactgggcaaagaattcaagaaccagactgtaataacttcaatacaccaaacatcatgtttcttggctattacctgccttatcccagttagataagttaagatctttctgtgctagtttcatcagaatctagtactctttgagtaacttatgaagttcaatgccactacatcaaaactgtttgaaacttcttgattctttttcctcctttttatagaaagggaaaggtgtgccatattgtctagtgactgtcagcacccacttgcctatttatttaaaaatcaattcccccttttttctcggtggcatcagtgtaggctatcatgtgtggtggataactcttttcatagcagatcaatctgatagagtgttcttcggtggttcctgtcccattgactttaaataagttttaactttggttgtgcaagaatatttcatctggttgggtgcaagtcaagtagtactgatagatcaaaccatgagctgcgtcggtgtggtttcataaagaagataacgatatctaggcttactggacatgcttactgtaatcaagagcaagcttaatggcttagcttttatttcttgaatgacgatctgagctgaatacgttgaccctggtgctgagagcagaggcaattttcacctttggtattctatctaaacaatgtaggataccagtataagagggttaatcttgcagatgtttttatttctaacagttcatttctgaactatcgaatgtatttgcagtcacttatttagtttcatgaactgaaaattcttccattgatgtttgcctcaggtgcatctgcgtaaggtcatgcacagaagtcgttacatgcggaagagttccatcattcccgcaatcacgaaccgaatcaagagagatctgatccacaatcctctgcacctaatattttcagtagattttcttggagtgacaaaatcaactttgtcatcacttagtaaagggtttgcagagctctctactgatgggcaatttcttcagctgagatcaaagcaggtaaaacatctgctctggtggttcaccatccctgtttatattaaccacaccaggcaattcaagttaagtgtgtttcaggtttggtcaaggagaataactggtgttggtgatggactagttcaagggactgaagcatttgctcagggtttggcttttggggtttctggtgttctaagaaagccagtcgagagtgcccgacagtatggtgcaattggcattgcacatggtcttggccgtgcttttgtggggtttattgtccaacccttaagtggggcctttgatttcttctcattgacagttgatggaattagtgccagctttatgagatgcgtggatattctgaataataaacatgtccctcagaggattagagatcctcgtgctatacaccgagatggtataataagagagtacgacaaagtacaagctgcgggccaggtacatgattttcccttatttgtttttaagaaattgtattatagatatgtaaaatttgcgaaatggtgcacagagtaatagagttgccacttaagtatgttgaacaccctgttctgctgaaacttacagctattcctgaaaatgatgctctaaaaatacctctacctcaaaatagtttcctttcaccgtcaattgtgttatgtaaatcctcgcaaaaaaatattgttatggatatatcagaatgagggtgcttggtagggaggagaaaaagatatgtaagagacattaagggaagacgagacctaaaagaactttatatcccatgtttcgttattcttagtctggccagcagcctttttaaggctggcttctacctcttaacaacttttaagcagtagattgtgcttcttatctctagtacaaattccttctagttgtctacaatgcaactcctaaatgtttatatctaacagtagcctttatgctacatcacttctgtctttctttttgccatgtgagtggcatttccgccttattgagtggctgcagcacatgatagtgcgaattaggccagcccataacagttccgactaggcctgtagcctccacccacgacagatgtatttgtttttcttgataaacagttgcatagtaggttctgcaagtatgctgcagtagaaaatgatggttaacattatgtgctagccttctgataactgtttcaaggagcgatagtttttgtttcatagtactggttttacttcagtcaatgaatattgttgatgctatacacttaatttgagcattcaattgtccagatggccctttacctagcagaggctagcagatattttgcatgcacagatttatttcgggaaccttcaaagtatgcatggtcagattactatgaagatcattttatcgtacaaaatcagaaggttgctttggtaacaaacaaacgagtgatactgcttcaggtgaggcctctttctgtctgattctcatagtaaactgcttctatttattttactaaatcccagtgttctttttgtgtagtgcgtggatctagataaaatggataagaagccttcgaaaatactttgggacgttccttgggaagatgtgcttgcattggagctggcaaaagctgggtatcaaaggccttctcacgtaatcatacatctgaagaattttaggagatctgaaaactttgtaaggcttataaagtgcaacgttgatgaggagcatgaacctcaggctcttctactttgttcttcaattcgaaagatgtggagatctcaccaggcagatatgaaagttgtacccttgaaggtcctctctctctctcacacacacacacacacgcacgtgcgcgcgcttttgcaaaaaaacaaaaaacaaaaacaactgaactcatacttctgatccaaaccaaaataggttcctgggggccagcacgatgtatatttcgcatttgatgaagatatgagggagttccacagttttgctaggcctttgctaagcccaaggggagcagcaagtaatgttgaggagcgactcattaacgatacagttaacttccagaacatgtggagcagtgaacaagaaattcgaagcagatgcaaactactttcaaagcaggtaaattagctacttttaccttatgattaaaagataatcttcctgatcttttgttcttctatattcatgatatgtgttgtttaaaataaaccgtggttttggttccaggttgcagatgatggaagggtgtttagtatctggaggcctctctgccctagtgggtatgaaatgttgaaatgagacttatgtccctctaatttacctgtttttatgctttccttcgaataaagttatcctattttgatgattgctgcaaatatttaacaacttaattttaggtatgtctcaatcggagatattgctcatgttggcattcatccaccacatgttgctgctgtctacaaaaatgtgggtggaaatttcgctctgccacttggctatgacctggtcagtgtttaatgagatattttctcccttgttactttatttaattttgagcttccgctaaaaatatatttctaaacaaagaaaaatatactctctctgtttataatatatgacgccattaaccttttgagatccagtcgtcttaactaaaaagtatttaattatcatttattttattgtaacttgatttatcgtcaaatcaaaaaaaataaacaagacaaattgtcaaacgtttgtgttaacgacgtcatatattttaaaaagggagctattataatgttatatggtctcttttatttaattacatatagattttctagagttgggatgtgcacttctgttcattgttttcctggcataataggtttggagaaactgtggtgaggattacaggaatcctgtatcaatatggtttccacggccacctgaaggatacgtagctctcggatgcgtggctgtatctgcttttgaggagccccctctcgactctgccttctgtgttagtgagagatttgcggaagatgcagtatacgaggagcaaattgtatgggcttcgtcagatgcctacccatggggatgctatgtttaccaagttcagagcaagtcactgcaattcatggcgatgcggcggccaaaagaagagtgtgagctaaaacctaagaaggtatcagagtcttatgcccagcaagcattggagaggtcctgagatgagaggcaaacatgccatgcattagtgtagacactagacacatgtaaagtgatgtacataacataggtgcgtatacatgcgtgtaagaaaggagtcaggagcaggacagatccagcattttcgtgcaagatgtgtccgaaatgagagtttcaggtttacatttgctcccatttgtaatccatcattctgcttctacctttgtcagacccttggggtcaaagcttgtacgtcgagcacttgtaccaaacaatccgtctgcttgtcaaccagcagaaaaggggttgtaaattttgtacatgtaaaatcggttgtacttttattcagcactaaataaaaagcatgtaagcggttgggcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0565300, RefSeq:Os10g0565300