Difference between revisions of "Os10g0580900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0580900| Description = Conserved hypothetical protein| Version = NM_001072049.1 GI:115483693 GeneID:4349524| Length = 2521 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0580900|
 
GeneName = Os10g0580900|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0580900

Description

Conserved hypothetical protein

Version

NM_001072049.1 GI:115483693 GeneID:4349524

Length

2521 bp

Definition

Oryza sativa Japonica Group Os10g0580900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23647745..23650265

Sequence Coding Region

23647896..23648528,23648859..23649137,23649242..23649388

Expression

GEO Profiles:Os10g0580900

Genome Context

<gbrowseImage1> name=NC_008403:23647745..23650265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23647745..23650265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccctttttccgcagagcttccagtgaccccttgtgcttggaagacaactccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctacaagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcccaacaaccttccccagaacggaggtcagcctaataaccatgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcagattgaagagggcagcaaaggttgctgctggtagccagggtgatgctagcaccagaatgagcctgaaaaccgggagatacactgatgatgtccagttctgggatccgcttgccctcagagttgagagtaccataggaacaggaactccggttcttgttccaactttccattga</cdnaseq>

Protein Sequence

<aaseq>MDPFFRRASSDPLCLEDNSVQHGIERCPFLRNINEPTSFSFSSV NFPVPARGDKGPIFEDGPNFDMAFRVFHGQDGVVPLSHGSFERFEKPMPKPNPEFNPL AAKAATISLSAFGGFFSFGDFSNKRNKKNSNQKKPNNLPQNGGQPNNHEALSNEWLEM GQCPLAKSYRALSGVVPLVAKMMTPPAGMKLRCPPAVVAARAALSRTAFAKGLRPQPL PTKILVMALLGMAANVPLGIWREHTEKFSVQWFAAVHAAVPFIGMLRKSVLMPKTAMA LTIAASILGQTIGSRAERIRLKRAAKVAAGSQGDASTRMSLKTGRYTDDVQFWDPLAL RVESTIGTGTPVLVPTFH</aaseq>

Gene Sequence

<dnaseqindica>1738..2370#1129..1407#878..1024#tcttctcttgtttcttcccatcccatcctcttctcctccgcattttgctcttcattcatttgtgctgtgctctccacgcgccctcgcctctctttcctccgatcctccgcttcgttcgaatcccacaggtgaggtgacctcttctctccagtctcctctccttagtaggattaggatcattacgaatttaggatcgagaatataggattatgaaccagtagtattaggattatgttttcttcgattctttttctccttcaaatcaattcccaattcgatttagggttgacggatacgcgagcagggatagccctcccgcccgcagaaagattgggctttcttggtttccctgtcgtaatcccttctctccagccaacgcggtgaaaattttgtttcggtgggggtggggtgggtggttgccgggtaggtgctggtgcatctgctttcagtttcaccaccaccatggattggccgctaaacatatactgatatacacctgtttcctgtcccctacccctaggctagactactagggagaattcaaaaaaaaaaaagaacgctggacaactagggagaatacaatgcaaccagattcaatcatactaaggcttgtattcccaaacaccacttaaatcttacgcttctagccatccttttaattctagtgttagcaataatctagtctatgactctacatgctcttgcggaacaaaataatattatagtcgcccaagacacttttttgtcaagttttttttttataaatgatttggctcatcagttaagcatggacctgccacggcagcatcatttctttctgttttaacatgctatactaacacttctctctgctcacaggtcagtttgtggtgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagacaactccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctacaagtttttcattctcgtccgttaattttcctgttcctgtaagccctttaccttccatcctcataatcttatcgcatgtttctgaaaaattggatgtattgtggatgccattgctcaactatatcatttgctgcttgtaaaggcaagaggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcccaacaaccttccccaggtaagtttttggttctctttgctcaggctcttctttttttcagattaccttgcttgtctatatcgaagtgtgatgtgtcagaatagtttgtttaaagaaatcatttgtcagaatgttgtggcatcctactggatggttctttagatgagaccaattttaatacgaaaaggaaagggaaatcattttggtaacagtaaataaatgctggacatgatttttatgaacttcccctatccctagatagggggaacactaaaatgaagatggaatgaatggttttaccatattggtagtaagaggtgcacttaatctgattctttggtatttcagaacggaggtcagcctaataaccatgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcagattgaagagggcagcaaaggttgctgctggtagccagggtgatgctagcaccagaatgagcctgaaaaccgggagatacactgatgatgtccagttctgggatccgcttgccctcagagttgagagtaccataggaacaggaactccggttcttgttccaactttccattgatgatgtgccttgggtttgtttcttcggtcgattattgttgtattcattgtgttgtgccttagtctttatactaaatattacgttggatgcttctcccatgaatctggggtccaaatttcagtgtacaataaattgcacgtgtacatttccg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580900, RefSeq:Os10g0580900