Difference between revisions of "Os11g0109900"

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(Created page with "{{JaponicaGene| GeneName = Os11g0109900| Description = Double-stranded RNA binding domain containing protein| Version = NM_001072089.1 GI:115483790 GeneID:4349575| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0109900|
 
GeneName = Os11g0109900|

Revision as of 21:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0109900

Description

Double-stranded RNA binding domain containing protein

Version

NM_001072089.1 GI:115483790 GeneID:4349575

Length

4484 bp

Definition

Oryza sativa Japonica Group Os11g0109900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:456198..460681

Sequence Coding Region

456522..457390,457535..457748,459925..460184,460520..460598

Expression

GEO Profiles:Os11g0109900

Genome Context

<gbrowseImage1> name=NC_008404:456198..460681 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:456198..460681 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatgccgcccacgccccttccgccggagaccgccaacacctcgcccgctcccaacggcgccaccgccggaatcagggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccataccagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaatcagcctcaggcttagctcctttcatatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaagatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtcaatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgtggaaaaggatgaagctagagtggctggagatgctcacgattctgacgtcctaatgcagccaacagtaataacacaggaggcatcttgtggcactctgttccttcaaccttgtgaggaagctaaaagagtagaagctgagccacctagagatattgaaatggtacaacctgataaggagaaccaacacagtgacgctgcattggtgcaacctgatgatgaagctagagtagaacaggagccatccagagatatttcagtggtgccacctaatgaggaagctataagtgttaagcaggaaccatccatcgatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatcgatactgcaatgctgcaagcttgtaaggaagctggaagtgtagaacttgggccagccagagatactgtaatttctcaacttaatgagcaagataggggtgtaaagcaggagccagctggtgacactgcagtgccacaacctgacgtggacgctagggtcgtaaaggaggagtcaccaagaacggaacctaatggggaagctacgaacatgaaggagacaccaaagaactctgcagtgtgtaattctccagagacaaaggaatttggagatattacagcaatgggttcagatcctcccgcaactaatatgagcgaagaataa</cdnaseq>

Protein Sequence

<aaseq>MDMPPTPLPPETANTSPAPNGATAGIRVENCYVFKSRLQEYAQK AGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVK SIPANANIPAVQETGLCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQY IGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVPGKRVGKEVEKMPIETPK PLKIKKGGFKKKWNKRKFMKKDGQAVVEKDEARVAGDAHDSDVLMQPTVITQEASCGT LFLQPCEEAKRVEAEPPRDIEMVQPDKENQHSDAALVQPDDEARVEQEPSRDISVVPP NEEAISVKQEPSIDAAILQPKEEASSVKQEPFIDTAMLQACKEAGSVELGPARDTVIS QLNEQDRGVKQEPAGDTAVPQPDVDARVVKEESPRTEPNGEATNMKETPKNSAVCNSP ETKEFGDITAMGSDPPATNMSEE</aaseq>

Gene Sequence

<dnaseqindica>3292..4160#2934..3147#498..757#84..162#atcgcaccacgcacacaaccaaaacccttctcttctctctcgactctcgacgacgctgcggcggcggtggcggcgaggtgggaatggacatgccgcccacgccccttccgccggagaccgccaacacctcgcccgctcccaacggcgccaccgccggaatcagtatgtttctctctctcccccctccctctcaacactcttctttggtctcaacaagaaccaagggaggactgttcattccaacgagctaaccgcaggttttggttcctctccactttttaaatggaaattgctttactggagagcattcaccatcatacatgatgcattgatgcgcctgggatgtaactactactacatttgttgccgaaacattacttgcattattatgtcatcttgatagagagctggttgctgggacgaaatctcaaaaattgctcttcccggcatcgtggtaatgctattttctgagttgtggtatgcttgatttggcccaggggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccataccagccaacgcaaacatcccagctgttgtaagtcactgtctgctctacttgtgtttttgtttaactcaacatgatggaatacctggggcctgggaggacctgctggtgtagtacaagattagtaaaagtgttgggatagtctacttatttctatacagtgcctgcttttgaattcgcgcgaatccgaagaatgagatagccactcacctgataactccagaacgaatcagggctttcatgtttggatagagttaggtcctagagagcaagaagagagggtatttgcatagaagagattgtgaaagctttgctgtcagtcaccacggtcttattattatctgccgtcatgatctgtctgtatcttttcaggctcataattctactcaggtattatatgaatataacaggaaattggttgttaaagagcttctgaactcactcttccccggtttgtgaaccatgaacaatgcaaacatcaaagtacacatattaagttttgtgatcatttccgagtccaagacctagataattttgatgctcttttggtcgagtccctaggaattaacgcctgactaaattagcatagtgctataatctcttacctggattctatgttcttgacacaccttaatatgttttccagcaagagactggcctgtgcaacacaggaagtcagcaactgaacctgagggaaatgcaccgagaagctgaccaccaccaccgccttctggcaacccttgcacgccactgccgtcttgctgccgctgccaccttcttctcctccaccctccgcactgctcgtgccctcaactccctcctcgctgctatctgctcttccccagcgttcctccgctttgcccctaaagtcctcttgctcgctgccccatcagtctcccctgatgcgaccaccttccacatcctcatctccacactctgccaggcccaccgccccgctgctgccgccgacctcctttgctgcatgccctcgcttcttcttgaccctgacctggccagttgtcgtgctgtcctctcctccctgtgccagtacgcttccgctcaggatgcagtagcattcttggacaagatgtgccattggggcatttccccaagcagatctgactaccacgccgtcttcgatgcgcttctgcaggagggaaaggtagcggaggcatatgaggtcatgaagaataagatgggctctaacagggtggcacctgcacttgcatacttcaaattgacaatgcaagctttcagcgagtgcttggagttcgattctgtggaggaggtgtttgatgaaatgctcctgagagggctggtaccagacgtggatgtgtatagtgtgtacatcagcgcgctatgtaggaaaggtgaccttgccggagcgcggcagatgatgacctgcatggagcacgccgggtgcccaccggatgtaaggacatttggtgtggtagtcgccgggtgcatgtctgccggggacatgggcacagtgagggagttggtgcaggaggcaataaggcgtggcctgcagtgggatccaccagcattgtcggagctgataggcttgctgcaggcaggtgatggtgccacacagtcacaggagttactgttggagccactatttgtgcacgatgcaccagtgttggggcagctgattggagcattgtgcaagcaagggctattgggacctgctgctgtagtagatgattattagaaagcattgtaattgtctttttgtttcaaactttcaatacagttgttggttttgaattctcagaaatctgaagaacggcataagaattataaaaacagagacagaaaaggcaaaccatggactataactccaggaatactcagagctttcggctttgtagatcactagattgtcggctaaagttaggacccagtgagcaagaagggagggtatttgtatagatcggccaggtaggagattgcagaaagtctttattgttgtcttctgtcatgatttatttgtattttctcaagcttacaactctactaggttattcccatgaatacaataggaaattagtcgtttaatagctactgaactcgtactgccaggatttagataatttggatgttctttagttcttaggaatcaggctgactaaacttagcatagtgttataatctctttcctggatcactgtgcatttttttacacatattaatatgttttcagcaagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaatcagcctcaggcttagctcctttcatatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaagatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtattgttctgttcttctctaagggtcttatttttattttttatattatccaggctattcactgttaaaattaacattgctatgttcttgtttgtgtgttattatggtgaacattgggtcatgcatgggcattgcttggtgcaggtcaatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgtggaaaaggatgaagctagagtggctggagatgctcacgattctgacgtcctaatgcagccaacagtaataacacaggaggcatcttgtggcactctgttccttcaaccttgtgaggaagctaaaagagtagaagctgagccacctagagatattgaaatggtacaacctgataaggagaaccaacacagtgacgctgcattggtgcaacctgatgatgaagctagagtagaacaggagccatccagagatatttcagtggtgccacctaatgaggaagctataagtgttaagcaggaaccatccatcgatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatcgatactgcaatgctgcaagcttgtaaggaagctggaagtgtagaacttgggccagccagagatactgtaatttctcaacttaatgagcaagataggggtgtaaagcaggagccagctggtgacactgcagtgccacaacctgacgtggacgctagggtcgtaaaggaggagtcaccaagaacggaacctaatggggaagctacgaacatgaaggagacaccaaagaactctgcagtgtgtaattctccagagacaaaggaatttggagatattacagcaatgggttcagatcctcccgcaactaatatgagcgaagaataagctgtggttgttgaatcaaaatgcaatagctttagtgtgttcacctgcagagggcgaagaataagctgcggttgttgaatcaaaatgcaatagccttagtgtgttcacctgcagaggtgtgaaacatgaatggctggcttttccagtttaaaaagaggcagctggaataggaagatgtatgtgggctgagaatagttagttcatatttgtcattgttagctaggcatgtgtatgcctgatgatatgaatgaaatgtattacctgctgctttagtgagcactactttgaaaagaaggggaaaaaatgaattcgaggtttctgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0109900, RefSeq:Os11g0109900