Difference between revisions of "Os11g0129700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0129700| Description = Similar to AP2-1 protein (Fragment)| Version = NM_001189401.1 GI:297727932 GeneID:9266656| Length = 5532 bp| Defini...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0129700|
 
GeneName = Os11g0129700|

Revision as of 21:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0129700

Description

Similar to AP2-1 protein (Fragment)

Version

NM_001189401.1 GI:297727932 GeneID:9266656

Length

5532 bp

Definition

Oryza sativa Japonica Group Os11g0129700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1346084..1351615

Sequence Coding Region

1349301..1349335,1349723..1349847,1349928..1350016,1350262..1350270,1350631..1350716
,1351278..1351560

Expression

GEO Profiles:Os11g0129700

Genome Context

<gbrowseImage1> name=NC_008404:1346084..1351615 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1346084..1351615 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagagatcgtctcctgatcccgcatcatcttctccatctgcatcatcctcgccgtcgtctccttcctcctcttcctccgaggattcctcttcgcccatgtcgatgccctgcaagaggagggcgaggccgaggacggacaagagcaccggcaaggccaagaggcccaagaaggagagcaaggaggtggttgatccttcttccaatggcggtggcggcggcggcggcggcaagaggagttctatctacaggggagtcaccaggtatgcgtctctgcatggcatcggtggactggcagatttgaggcccatctgtgggacaagaattgctccacttcacttcagaacaagaagaaagggaggcaagtctatttgggggcttatgatagtgaagaggcagctgctcgtgcatatgaccttgcagctcttaagtactggggtcctgagacagtgctcaatttcccactggaggaatatgagaaggagaggtcggagatggagggtgtgtcgagggaggagtacctggcctccctccgccgccggagcagcggtttctccaggggtgtctccaagtacagaggcgttgccaggcatcaccacaatgggcggtgggaggcacggatag</cdnaseq>

Protein Sequence

<aaseq>MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRAR PRTDKSTGKAKRPKKESKEVVDPSSNGGGGGGGGKRSSIYRGVTRYASLHGIGGLADL RPICGTRIAPLHFRTRRKGGKSIWGLMIVKRQLLVHMTLQLLSTGVLRQCSISHWRNM RRRGRRWRVCRGRSTWPPSAAGAAVSPGVSPSTEALPGITTMGGGRHG</aaseq>

Gene Sequence

<dnaseqindica>2281..2315#1769..1893#1600..1688#1346..1354#900..985#56..338#gttgcctctcctcctcctcgtcacctcacctgcacctgcaccaacgcgagagatcatggcgaagagatcgtctcctgatcccgcatcatcttctccatctgcatcatcctcgccgtcgtctccttcctcctcttcctccgaggattcctcttcgcccatgtcgatgccctgcaagaggagggcgaggccgaggacggacaagagcaccggcaaggccaagaggcccaagaaggagagcaaggaggtggttgatccttcttccaatggcggtggcggcggcggcggcggcaagaggagttctatctacaggggagtcaccaggtatgcgtctctgcatggtcagttgcttccatccctctgatcccagttctgctgttctttctgatcccctcttgatttcagtcgcgaattcatcctgcattgccgctagctaatcaatggctgattttcagcccaaaattccgcatcgtttccatcatttcaggctcccgaaattatcagccgcttctttccaatctgtttctgaacatttcacttgcatgtcagagatcatgaattatttttatcgttttctgggtggtgagtctgctccccttttcatgcctcatcttttggaggttggcgagcatgatcgatcggatccatttcttgatctcataattcccatttttaatctttttttcttgctgctcctccccttggagtgagtcaattattattagctgggaagtagggagttggttggtctacatttactgctggggtggtcaactccttcagtttttcttcctcctgtaaagcaaacactaatgcttaatgctgcttatttatcaatcatcaataaattcaatatacggtggaatcatttgttgcatgcatgtatctgtatgtataaacaggcatcggtggactggcagatttgaggcccatctgtgggacaagaattgctccacttcacttcagaacaagaagaaagggaggcaaggtacattgatcgcaacatgcattagttgcctgattttttttaaggatttttaacctgaattttctctgaaaatactaaagaaagttaaatacgagtatttttacagtataatgtactataatgaaagaaaaagggaaacatacaaggtccttggtgtacttctgtatactgccaaggatcttgatacatcggccattagtacaaagcttattactataaagtggagcgaattttttaaggctgacattctgattaagctttttttatctcctttcttttttgctgttatctttgggggaccttgcccttgtgatgcgcatgtgaccttgatctgctgctgcttgatgctcctctcattagtctatttgggtaagtcccacaagctagttgtctatacacacctgttttgtcagattcatgctgcatgttgcttcctgttcttgtataatcttagatttcctttgtttgatctgtcacatccttggtttgtctcaatatgaaaacagtttatccctaagaatataggcatatagcaactagttgttacataactacttaatgttttggtgtttggtctgtttctgaacattagtgcaatgtttaatgatgtttaggggcttatgatagtgaagaggcagctgctcgtgcatatgaccttgcagctcttaagtactggggtcctgagacagtgctcaatttcccagtaagtttgccaacttaccactagacaattgcgacttgtgtaatctgaattattactgaagataatgcgaattattgcagctggaggaatatgagaaggagaggtcggagatggagggtgtgtcgagggaggagtacctggcctccctccgccgccggagcagcggtttctccaggggtgtctccaagtacagaggcgttgccaggtaggactactgattaattaactctaattaatctctctctctctctctcttgacctgaatgatgagtcagcatagcattgctagctagggtggcattcatcagctggcaacgtcatttgccagccgtgtatgctctgcatgcatgctccatggtccatggcctcttctttcttgtgtcagtttcgtgcaatgtcatgcatgcatctaggaaaagtcagaactgcaaaagttttaagcttctctctttcttgatgaaatctgcttccaatatcagttactgtattgtggtgccagtgctaccaacttgctgtttccattttgttcagagctagcagctgtctgttagtaattcatttctgaactttttttttgtctggttttgttcaggcatcaccacaatgggcggtgggaggcacggatagggcgggtcctggggaacaagtacctctacctgggtactttcggtacgtattctttcatccaatctttcatgctctttgctcttctttcttggagcccacttaccttaatcaaatgttgattactagcattgacaagccgctcttgtttgttggagaatttgcctgctgtaagccggccacctaacttttaccaaaatttatgatggttgatcaacccatctgcgaaattaaatggcgtgtttttcttgtttcccttcgatgtagatttgaccccttgcttttcttgaggattgcttactaggtagtacttcctctgtctcaaaattgagacagttttagatttcaatataattttcgggatgctactttgaacaataatatttataaaaacaagttatcttaaatgaaagagttgcatattatgatactagtttgagtaaatttcataaaactgcagatattttgtacaatctatcacaaaactacagatttaagaacttgttttacaaaaatacagattcagtggcttcgtttatcacaaaactacaggtactttgggcaatatatcacaaaactaaagatttaagtacttgtttcacaaaactacagatttaatatcttcatttatcacaaaactacaagtttaatggcttcatcatcacaaaactacaagttttagcattgttaaaacttgtagttttgtgataatggagacactaaatctgtagttttgtgataaatgaagacactaaatgtatagttttgtgataaacgaatacactaaatctatagttttgtgaaacaagttcttaaatctgtagttttgtgatagattgtacaaactacctgtagttttgtgataaacggagacactaaatctgtagttttgtgagacaagcttttaaatatgtagttttgtaataaattgtgcaaaatacctgtagttttatgaaatttactctataatctggtaacattattcttacgtgattgctctttttaatttttcattattaatagttaaagttaaaaatgttgatttaggactattctaaaaatgcttatattttagaacagagatagtagtatatattattctccttgtatgtttttgaaccacaaactctccattttactataaattaagtgagctggtgatatcactgatatggaagcatagtgttgaaacttccttttcttttacttaaaaaaatcagaaaatattttcctgctgtcaagatcaaagaccatgagaccaagataccatcctgtatgcaatccccagaagactgcccaatttgccctagaaatagcataaaaacaagccccatgtcttgatcaccaccatgtcctaattactagacaaaatcctagtatagatacattatatggtacatgacttggaaatgcatgtgacaagcacgtgagtggtgctgcaatgccagtagtaaaaaccagatggtgcatagggatcttcaattgttcatcactgccggctctttccactagagctagctgagtgagtcagcagccagttgcaagtgctcacttcacgtgcatggagaatgccctactaggctattaccccccctgtgccaaactagatcaagattcaagatccagaaccacacagatggattcatcactactttcatcacaactaaagaaagaaaaaaagggaaagtgaacagtgttcaccgattactagtaaacagaaggttgccagcacagttctagttaccaacaatgtgggaaaagtcatgccagatctcagatggtgtccagcacatgtcaaactagaaagtgaaaaaaaatgtgaatatgggatgcaattcagcatctctcagtattaagatccaatgcattcattttctaaagtcttaaatctatacagcatgacctgatcaattctgtaatgccaatgttactagaagtattcatgactcctagtagtactaagttgccccaaagattcagtgtctcaccagaaaatttgttctcatttcaacaaacgtacctctttttacagatactcaagaggaggcagccaaggcctatgatcttgctgcaattgaataccgaggtgccaatgcggtaaccaacttcgacatcagctgctacctggaccagccacagttactggcacagctgcaacaggaaccacagttactggcacaactgcaacaagagctacaggtggtgccagcattacatgaagagcctcaagatgatgaccgaagtgagaatgcagtccaagagctcagttccagtgaagcaaatacatcaagtgacaacaatgagccacttgcagccgatgacagcgctgaatgcatgaatgaaccccttccaattgttgatggcattgaagaaagcctctggagcccttgcttggattatgaattggatacaatgcctggggcttacttcagcaactcgatgaatttcagtgaatggttcaatgatgaggctttcgaaggcggcatggagtacctatttgaagggtgctccagtataactgaaggcggcaacagcatggataactcaggtgtgacagaatacaatttgtttgaggaatgcaatatgttggagaaggacatttcagattttttagacaaggacatttcagattttttagataaggacatttcaatttcagatagggagcgaatatctcctcaagcaaacaatatctcctgccctcaaaaaatgatcagtgtgtgcaactgattctctctgtgtgtgtgtttctgggtgttgaaaatcttgagatatacagggaagttttcaggtttttatcttggggtatatttctctgtccaatggcactgccacaaagaagcaaagcttctgtaggcgttctgttcaggtggggaagattcatatgcttctccctatggtcctagtctcctagaaacccaaaggcattcaacttggcatgagacaagtgtctgtgttccttttcttgtaatacccccaaggctgattgattaactagggagacaattttctcccttaccctagattgagctagttaattctgattactcagaatcttgaatgcttgagtagtactataggtattcccacaagaaaactctgggtagttcacagttttataaggtaatggagcatatgttatacagaaatcacaatatgtaaatctatctaactttcagaataaactatactatacatcttggttgaggcatgaatgcat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0129700, RefSeq:Os11g0129700