Difference between revisions of "Os11g0134100"
(Created page with "{{JaponicaGene|
GeneName = Os11g0134100|
Description = Rhamnogalacturonate lyase family protein|
Version = NM_001072206.2 GI:297611184 GeneID:4349697|
Length = 12632 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os11g0134100| | GeneName = Os11g0134100| | ||
Revision as of 21:14, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os11g0134100 |
|---|---|
| Description |
Rhamnogalacturonate lyase family protein |
| Version |
NM_001072206.2 GI:297611184 GeneID:4349697 |
| Length |
12632 bp |
| Definition |
Oryza sativa Japonica Group Os11g0134100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:1554159..1566790 |
| Sequence Coding Region |
1554159..1554546,1554644..1554914,1555023..1555255,1555517..1555779,1555883..1556059 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:1554159..1566790 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:1554159..1566790 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcggcggcctgcacgaagctgccgttgctgctcctgctcgtcgccgtcgcagcgtcgtcggcgtcgtcactaacgccgctgcacgcggccgtgccggcgaagggacctcgccccggcggcagcgttaccttacacctcgaccaccgccaggtgatggtggacaatggcatcgtgcaggtgacgctgtcaaaccctgggggccacatcaccggcgtcagatacaacggcgaacgcaacctgctccactacgacggagaagccaactccgccgggtactgggatgtggtatggaacttccctgggtccaatagtccaagaggcatgatcgatatgcttgtgatgttgaaaggtagctcagggttctactgctatgccatctttgagcatgtcagagactggcctgctctcaacatttcagaggctcgcctcgccttcaaactgaacacggacaagttcaactacatggcgatctcagacgatatacagaggttcatgccgagcgcgacagacagagatgcacctcgcggtgctccattggcatacaaggaggctgtcctgctcgttgatcccaaggagccacagttcagaggagaggtggatgacaagtacgagtactcgctggacaacaaggacaacagagttcatggatggattagcagcaatcaccctaaccccatgggattctgggtcatcacccccagcaacgagttcaagagcggcggccctctcaagcgcgagctcacctcccatgtcggcccgacctctctgacaatgtttcttggcacgcattacgtcgggaacgacattgttctgaagatcgaggagggggagtactggaagaaggtgatggggccagtgttcatctacctcaactccaacccgaggagaggagatttgcattcgctctgggtggatgccaaggtgcaggcagaagttgaagctaggaaatggccatatagcttccctgaatcccctgacttccacaaggcaggacagagaggatcagtcactgggaggctatttgtcaaagacaggtatgtcagcagcaaagatatagctgctgggatggcatatgttggcctggcctctcctggacaacccggttcttgggccacagagagcaataactaccaattctggacaagagcaacaccctgtgggagcttcagcattggcaatgtgagagcaggagtgtacaacctctacgcatgggttcctgggtttcttggggactacatgtacacctcgcaagtaacagtaacaccaggacgtagcatcaacctcggtgatcttgtgttcgagcctccaagatcaggcccaacactgtgggagatgggtgttcctgacaggagtgcagcagagttcttcatccctgatcccaaccccaaatacctcaacaagatcttcatcaccaaagacaagtacaggcagtacgggttgtgggagaggtacgccgaactgtaccctgacggcgatctcgtcttcacgatcggcgagaacgacatctccaaggactggttcttcgcacacatcacaagaaagcaaggagacgggtacgcaccgacgacgcggcagatccggttcaggctggagcacgtcgtggcggacgccacctacacgctccgcgtcgagctggcggcggcgcagatgtcgagggtgcaggtggtggtgaacggctcggcggacgaggcgttgacgacggcggcggcgttcggcgacgggaacgcgatcgcgcggcacggagtacatggtgttcaatggagcttggatttcgcgatgaaggggtacatgttgcaggaaggcgacaacgtggtgttgatgacgcagacgagggcgttgagccccttctttggtgtcatgtatgattacatccggctagagggtcctccttccccttcgtggcgagatccgacgacacaagtttga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAACTKLPLLLLLVAVAASSASSLTPLHAAVPAKGPRPGGS VTLHLDHRQVMVDNGIVQVTLSNPGGHITGVRYNGERNLLHYDGEANSAGYWDVVWNF PGSNSPRGMIDMLVMLKGSSGFYCYAIFEHVRDWPALNISEARLAFKLNTDKFNYMAI SDDIQRFMPSATDRDAPRGAPLAYKEAVLLVDPKEPQFRGEVDDKYEYSLDNKDNRVH GWISSNHPNPMGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFLGTHYVGNDIVLKI EEGEYWKKVMGPVFIYLNSNPRRGDLHSLWVDAKVQAEVEARKWPYSFPESPDFHKAG QRGSVTGRLFVKDRYVSSKDIAAGMAYVGLASPGQPGSWATESNNYQFWTRATPCGSF SIGNVRAGVYNLYAWVPGFLGDYMYTSQVTVTPGRSINLGDLVFEPPRSGPTLWEMGV PDRSAAEFFIPDPNPKYLNKIFITKDKYRQYGLWERYAELYPDGDLVFTIGENDISKD WFFAHITRKQGDGYAPTTRQIRFRLEHVVADATYTLRVELAAAQMSRVQVVVNGSADE ALTTAAAFGDGNAIARHGVHGVQWSLDFAMKGYMLQEGDNVVLMTQTRALSPFFGVMY DYIRLEGPPSPSWRDPTTQV</aaseq> |
| Gene Sequence |
<dnaseqindica>12245..12632#11877..12147#11536..11768#11012..11274#10732..10908#10474..10615#10254..10373#2011..2070#587..708#1..159#atggcggcggcggcggcctgcacgaagctgccgttgctgctcctgctcgtcgccgtcgcagcgtcgtcggcgtcgtcactaacgccgctgcacgcggccgtgccggcgaagggacctcgccccggcggcagcgttaccttacacctcgaccaccgccaggtaaaattaactacatttagctatcgatgcagtgccggatcgatcgtgatcaattgatcagatcatgcgtttcgatcaattaataatattatataactagcggctggctagtatagtccctccgtttctaaatatttaacaccattgactttttagcacatgtttaatcgtttgtcttattaaaaaaatttgtgaaatatgtaaaactataggtatacatataaatatatttaacaattaatcaaatgatagaaaaagaattaataattacttaaattttttagataagacaaacggtcaaatatatttaaaaaagtcaacagcttcaaatatttaccaacagagggagtagctcttttcattgattaacacagtacgtgttacgtagtttaagctggcatattaacctgcatggatgtggatgcaggtgatggtggacaatggcatcgtgcaggtgacgctgtcaaaccctgggggccacatcaccggcgtcagatacaacggcgaacgcaacctgctccactacgacggagaagccaactccgccgggtacgttccatctctcgatcgatcggagtaattactacttgtagtattagtttgcttgctctttagtctcttcttcttttaatttcagaaaaagtactagctagctagcttgcatgaacataaaagtataactataaagatatgtgcgatcactagtggagaaatgttttttagtcccggttcgtaaccccctgtagtcccggtttttcaaccgggactacgaatccgggactaaagatcgctatctttagtcccggttcaaataaccgggactaaagatattttttcttttttttctgcttttaatattgaatattgatttcacaccatccccttccatatccaaatcatcacatattacagaacatctccaaatcctcaaacaaatcatctccaaatacatcacaaactcttaaaaaaattacatcacagggttctaaaaaattcatcacagattcacatctcacacaaaaatacatcacagatttacatctcaaaaaaaaaaagaaaaaaaatccggccggcggccactgccgcctcccctcctcccctccacgccggccggccagcgccgagccggtcgccgccgagcggccgcccaccgcagccgccgcctccgcgcggcccccggcgccgccgcgcggcctcccgcccaccgccgctgccgcgcggccccccgcgctgccgcgccggccgccgcacaggccgcctccgcaccgtcccccgcgtcgccgcctccgcgccggccgcctacactgtggtgaaggaaaaaaggaaggagaggaggggagttagagataaggaaagagataagaagttagagaggaaaaaaagagatagagggaggagtttgttgtgtggacgggaaaagaggatcggtactatggattatatagtgtgttttgatttttattcccggttagtaacaccaaccgggactaaaaataggtttttagtcccggttggtgttactaaccgggactaaagattatagggccctgacacagcctgacatggaatcaaccgggactaaaaatgaactttagtcccggttggagttaccaaccgggactaaagatgatttttagtcccggttggtaacaacaaccgggactaaagatcttcctcttattaaccgggactaaaaatcatttttagtctcggtttttaatggaaccgggactattgtggatataggtcgaccgaccaaagatggtttctctaccagtggatgtaacgagacactgtatattttatcttgtatcaaatttgatctcgatcgacctgttaattaatttgcaggtactgggatgtggtatggaacttccctgggtccaatagtccaagaggcatgatcgatatgtacgtcattacttcttaactttattgtatattgtactatatcgtctgcgaactatgcttgcattgggtgcatgcactttgagatcttcctgtgcttaaggtcctcaattcatttttgttgttctaaagtgaaaattaaggatgcatccacgaatgctacagtacttcagtagtcatccaacccaaccatcatctttgcgtgtgttcttattccacatctgtatatgtgatctgactactgttcattctcaatttatttctaaattataccaattttctacttggaatgtgcaaaataaatgtcagctagaaagttcgataaactagtactctggttctaactgaactactactagtactgaagtaggtacataaatctgaaactcactactagtagttagcagttacttcctccatcccaaaatataagcatttttgaggttggcacgggtattaaaaaagtagatgagaatgattaaaaaaggtgtgtgattgattgaaaagagaaagtaggtgaaaaagaatggttgtgattggttgagaggagaaggtaggtagaaaaatagcttcattttgggacaaagtactgtgctagaaatagttacattttgagacggaggtagtagtacttaactggctagctgtagttaattgtgttcttgttttattgccttactctgttacaactcatcataacataattaacaagatcaacctacccaccgtccacaacaatataacagtactagttcgattatttaacacgacttggacatatagctgctagctagttataatcatgttcatttttcttttgaaccacccatattcatatggattgaagaactggcaggtcagataacaagcttttgctgtaaaatatgaacaagccttttcagttcatcactctgcaccgaaagatgcttcctaatagcaatagtaccaagagcaacctgtaactgtgacttcagttcttttctgataagcaaacagtgtcaaacaccgtcagaaattattgcctaataaacataggatatgtacaagagctcaaatgattttcttgctggaaaacataatttcacagtaatgtaagggcccctttaaattggaggaaaaacatagaaattttcgaggatttcaatcctataggaaaatttcctatgaagccctttgaaacaaaggattgcatcatatccaatcctttgaaattcctatgtaatggacaatcatatagagattttggagaaaatttagcaagaggttcaacctcttggtaaccttcctttgagtctatctctctcatccaattcctgtgtttttcgtacggtttaatcgaacggtcattcctgtgtttttcctgcattttgcaatcctctgttttacacttacattcccatcaaaatcctacgtttttcctattcctacgctttttcaatcctgcgattcaaatgggccctaaaatagtatgcactgcaccatattacggtctacagctgaaggaattatgcttatctttcaaaaaagatgaactaattgactgaattttcacaggctggatagtactgaattcaaggtagtatcctcaagtgaagaccaagtggagctttccttcaggagcacctataatccatcacgtccaaatagtgtcagtctaaacatcgacaaaaggtactctccattctccagaattttcggacctgtattaataaagttggctataatttgtcctgtcatatatgttggaattaatgaatgggccttagcccactcgaagattaattctttggaaaatcacaaaaagcccacctcatgggatggcatgcatgtggagtttagtaccaccttgcttattctaggagagggggacctccttacaagggaggatgccctcctagccacttgaagcatgtgtggtggagagaagaggggaaacacgcgcgcgctcgctcgcctggcctggcagggcaggcggcgcgcgtgcacgacgtacgcgtcgaatggtccgcgtcgaatggtccgaaaaattggctcctcacccttgcgcagatgcagcctccttttgcagttttgttttgctgcaaattcggattcgtttttgttttggaaacgttccgaaaaatccggtgcgtgcaaacggcgtggagtccggataagttacgcgcgacttatccggttcggttacgcgcagtagagatcgtgcgggcgccctgatcaagcgacccttctctatataaaccgacccgccgtcttcacgcaatatatgcgaaaatcaatctagggtttgcctcctactctgtactgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccagcgatcgggagagcaggtctccggaacctctgcctttgacgtcctgcaccgggagaaggcggcaataaggtttttgggaagcgcttcgcgcgactgctccctgttcgttcgcgacggctcgccttcctcttcgctcgcgtgtttcgtgccttcgtagacacctgtgaaaagtttcgaccaagcagccggtcttttcgtcacctcggtacgtgttcaatatgttgcgcatatttgatctgttcatgttattctgcgtagtttacatgtgtagatctaatgatgcgttcatgctagttttcatctgtaatgtcatgatttatttatggaataaattaaatcattatatgcccataatctcaacaatccaaaaaccttatcataggcactgtgattttactatggctggttttgccgatgcactgaggccggataaattcaccggtgtgcattt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