Difference between revisions of "Os11g0156200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0156200| Description = Peptidase S28 family protein| Version = NM_001072325.1 GI:115484262 GeneID:4349822| Length = 5666 bp| Definition = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0156200|
 
GeneName = Os11g0156200|

Revision as of 21:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0156200

Description

Peptidase S28 family protein

Version

NM_001072325.1 GI:115484262 GeneID:4349822

Length

5666 bp

Definition

Oryza sativa Japonica Group Os11g0156200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2623847..2629512

Sequence Coding Region

2624055..2624197,2624341..2624390,2624488..2624567,2624664..2624987,2625566..2625683
,2626179..2626291,2626509..2626642,2628891..2629464

Expression

GEO Profiles:Os11g0156200

Genome Context

<gbrowseImage1> name=NC_008404:2623847..2629512 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2623847..2629512 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatccaccacctcgtcgcctctctcctcctcttcttctcgtgctgccacgcggtcgccgccggcgctggcgttcgcggccggctgccaccgacgctggcgacgtggcgccagtacgcggccgccgccgcgccgccgccgcaggtggtgcagtacgagacgcggtacttcacgcagcggctggaccacttcaacgagctgccggcgagcaacggcacgttccggcagaggtacctggtgaacggcacgttctggggcggggcggcggcgccggtgttcgtgtacgccggcaacgagggcgacgtcgcgctgttcgccagcaacaccggtttcatgtgggaggcggcgccgcggttccgcgccatgctcgtgttcgtcgagcacaggtactacggcgagtcgctgccgttcggcggcaccagggcggcggcgttcgcggacgcgtcggcggcggggtacctgaccacggcgcaggcgctcgccgacttcgcggagctcatcctcagcctcaagtccaacctcaccgcctgcaaggcccccgtcgtcatcttcggcggctcatacggcggcatgttggctgcatggatgaggatgaagtacccgcacattgtgatgggcgccgttgcatcctctgcacctattcttggcttaaacggtctatctgatccttactccttctataatgtcgtctccaacgacttcaagagtgaaagtaaacattgctacgatgtgcttcgaaactcatggagtgagatgtacaaagcgctggccaccgacgcagggcgagctcgactcaaccaaacattcaatatgtgcaaaggtaacgtggacgacatacccggcttggtcgagaaggctctaatctacggctcaatgatggattacccgacaccatccaacttcctcacctccctcccggcgtatcccgtcagagagatttgccgcgcgatcgacaaaccgacgtcggggaacgacacggtgtcgcggatcaaggacgcgatgacgatctactacaacagcaccggcgggcttgcgtgcttccccggcgccggcgccgaggacgacgacccctacggcatgttccccggctggacctggcaggcctgcacggaggtgatcatgacgatgagctacggcatcggcaacgccaccgtcttcccgccggaccccttcaacctcaccgcctacctcgccggctgcctcgccaccaccggcgtccctccccgccctcactggatccagtcctacttcggcggctacgatattcggaatgttttgaagagatctgggagtaacatcatcttcttcaatggactccgcgatccgtggagcgccggcggaatactgaagagcatttccaacagcatcattgcgctggttgagccaaaaggtggacaccacgtagacctgagattctccaccaaggaagaccctgaatggctcaagaaagtccggagacaggagatgagaatcatagctgattggctcaaacaatactacagtgatgaggccatagatagcatgatgaactag</cdnaseq>

Protein Sequence

<aaseq>MAIHHLVASLLLFFSCCHAVAAGAGVRGRLPPTLATWRQYAAAA APPPQVVQYETRYFTQRLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGD VALFASNTGFMWEAAPRFRAMLVFVEHRYYGESLPFGGTRAAAFADASAAGYLTTAQA LADFAELILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGL NGLSDPYSFYNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTFNMCKGN VDDIPGLVEKALIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDA MTIYYNSTGGLACFPGAGAEDDDPYGMFPGWTWQACTEVIMTMSYGIGNATVFPPDPF NLTAYLAGCLATTGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGIL KSISNSIIALVEPKGGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQYYSDEAIDS MMN</aaseq>

Gene Sequence

<dnaseqindica>5316..5458#5123..5172#4946..5025#4526..4849#3830..3947#3222..3334#2871..3004#49..622#agctcgatccatcactccatcactcatcaagctaactgcctaaccaccatggcgatccaccacctcgtcgcctctctcctcctcttcttctcgtgctgccacgcggtcgccgccggcgctggcgttcgcggccggctgccaccgacgctggcgacgtggcgccagtacgcggccgccgccgcgccgccgccgcaggtggtgcagtacgagacgcggtacttcacgcagcggctggaccacttcaacgagctgccggcgagcaacggcacgttccggcagaggtacctggtgaacggcacgttctggggcggggcggcggcgccggtgttcgtgtacgccggcaacgagggcgacgtcgcgctgttcgccagcaacaccggtttcatgtgggaggcggcgccgcggttccgcgccatgctcgtgttcgtcgagcacaggtactacggcgagtcgctgccgttcggcggcaccagggcggcggcgttcgcggacgcgtcggcggcggggtacctgaccacggcgcaggcgctcgccgacttcgcggagctcatcctcagcctcaagtccaacctcaccgcctgcaaggcccccgtcgtcatcttcggcggctcatacggcggcagtaagtctaacttaacttgagttttttttaatactccctgtttcaagatttaagttgtaagacgtttcgacttcgccaaagttaaactactttaaatttaactaaatttatagataaatataataatatttataatattgaattagtttaattaaatcaataattaaatatattttttcataataaatttgtcttgagttgaaaatattattattttttctacaaacattattaaatttgaaacagtttgactttgatcaaagtcaaaacgtggagatagtaaattgcatcattagcaagcagttggttaatcttacatcatcaagcagtaagactaactacatcatcaaacagttgatggcatgtgactttaggttaatgacatgttatcggttcatttgtcagtgactcaaagtgaaggatctatttctcgttggtgtatctgttcatatacgtgtgttattatgctaaggcacttgcagttgtcttaattatttagctacaattaaggcgagaaaggtgttagttaatgatgcttttctgttgtgcagttaatcgatcaggattgttcaggagtaggacagaaaatgactaatacctactccatccgtccaaaaaaagacaaaccctattttccgtgcccaacatttgaccgtccgtcttatttaaaaaaattatgaaaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaataaaaatatgaattataaaaaaaatttatataagatgaacagtcaaaattggacacgtaaacccagggtttgcctttttttatgacggagggagtacattggtagttattagctatcagaaaaattaatttgaaaatatataaatggctaagtaggtggctaataattatactaatcggcacgaaactgactggatcatatatatatatatatatatactctctccatacttataaaggaagtcgtttagtacaatgtttaagtcaaaccttgggaatataaaacatgaataattctcaagttgttgagtttgaaaatgtaaaaattatatgtatagatttgtcttgaaaaatactttcataaaagtatacatgtatcactttttaataaatatttttatagaaataagaagtgaaagttgtgttttggagaccgtgtcgctgttctaaacgacttccttatgagtatggagggagtatatcgagaaagatatatacaaatcagtagagtatcaagttctccaacgtgtactacgcatgagtagtgcattccagcttccacatgtccaaattaaatcccatcacaatttagaaaattatctccctggatatatagctaggctcttgagagaaagagtgaattaacattagtttggaatgcaagaaactaaaaactgaaaagatgacgatgatagcgtacgtgcaggccgggtagtcgataaaaagtcctagctatagcgtgacctcaacttaagtactactcactataattgctatagttaattagctgtctgatataaatccaaggacgtacgacgaagatgatctgatggactttttgctgggccactgacgaaaacgtcggccaaatatattaaaatttaggatggaattagaatatataacaacattgattgtttagaagatcgataatccgatgcaacttttcatctttcataaatactatagatcgatagatttagctaagatattgtatgtccaagtcagagcttcttccattgaaaaaaataggtgaacgagagattacgtgctatatgcatattacagataccaaaacttaatatggttgtatgtctgatgatgagcagatgccaaaaatgtaaatcgttatctaatactccctccatccttaaatgtttgacgctgttgacttttttaaacatatttaaccgttcgtcttattcaaaaaaaaattaagtaattattttttttctatcatttgatttattgttaaatatacttttatctatgcatatagttttacatattttacaaaagttttttgaataagacgaatggtcaaacgttttaaaaaaatcaacggtgtcaaacatttagggaaagagtgagtaagatatttctattatgtacgcgtgcatgcgattctttaacatgtgattctagcatgatacattgtctgtgaaattacatcaagttggattaatcgtaggaatttttcttttgataattgatgcaaataaacagtgttggctgcatggatgaggatgaagtacccgcacattgtgatgggcgccgttgcatcctctgcacctattcttggcttaaacggtctatctgatccttactccttctataatgtcgtctccaacgacttcaaggtataataacaattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattatatcgatcattattctctctttttaattacgatcgagtacttagctgcaaaatactgctttgacaattatatatgaatgcgtgttaattaatatatcagagtgaaagtaaacattgctacgatgtgcttcgaaactcatggagtgagatgtacaaagcgctggccaccgacgcagggcgagctcgactcaaccaaacattcaatatgtgcaagtacgtatttatctgtaccctgtactgtatttttatccgtattcctgactttaatttagtgcccttggtgagatatgacgagatcactcctactattatatggaaccacttaacacacaaacaaatctaatatataatggattataaatcactatgaatttttttagagaagggttattttacccggcctctatatccaaccggatatatgcagcctttttttagaaactaggaacttagcctatcaaatggagaacttagccctcaaataacccaatctgaaattcgctcctatggagatttgaactcaggatcttgaactatgaaattaataacatagaaaaatactgttaaatgcgcctctatgatatatttctagaactgttgtttttttaatttcctctaaacacaaggatgggttgaacatcaagggagtaattaatgtaattcaatttacgtgattaattaactaattgattgattttatatatgcagaggtaacgtggacgacatacccggcttggtcgagaaggctctaatctacggctcaatgatggattacccgacaccatccaacttcctcacctccctcccggcgtatcccgtcagagaggtatatatatacatatacgtatataatgtatgcatacatttctactcatttttctctgtgttcattaacttatgggtaattttatcattattgagaaaataaatattttctattgttaaattaggtacctcgagttgatttatcaaagaccttaattaaaatcactcaacttgagaggggtaaaacagcccccgggcatcatgcatggaagaaaaccttctcatacaggtcgagaaaaccctctgaaccctatcacacccttacatagcggccaccatagtccgtgtgacaattatcccttacatagcggccaccgtagtccgtgtgacaactatctggaccgaaccttagaggcttagacctatgctttggcgtgtgacagacgagggaatttttttttaccctagcctaaaacttatctccactagaagtcgaacataggacctgaggagtgctactagagccacctaaccaattcatctagaggcccatcattcacaacttatacatacatatacatatacatatacatgttttatatattgtacattattatatttatgaatataaaaaaacagatttgccgcgcgatcgacaaaccgacgtcggggaacgacacggtgtcgcggatcaaggacgcgatgacgatctactacaacagcaccggcgggcttgcgtgcttccccggcgccggcgccgaggacgacgacccctacggcatgttccccggctggacctggcaggcctgcacggaggtgatcatgacgatgagctacggcatcggcaacgccaccgtcttcccgccggaccccttcaacctcaccgcctacctcgccggctgcctcgccaccaccggcgtccctccccgccctcactggatccagtcctacttcggcggctacgtaatttcatcatctgttgatcgatcatctaagttaatttcagataaattaattgatgaactactgatgatcgaattaattttatatattcgccaggatattcggaatgttttgaagagatctgggagtaacatcatcttcttcaatggactccgcgatccgtggagcgccggcgggtaatttttgtttaaaatcccaatctggtgcaaaatgttaatttacttggattaattatataagcacacttgacggcaatcttttttcttcccgcagaatactgaagagcatttccaacagcatcattgcgctggttgagccaaaaggtcatcagtcagtagctgaatttaatttatctatttgaactttttagctgcaatgaaaaccttttagacttccttccatgctgttttttttttcatcaaaatttatgtgtgggaattgagtaaaatttggttgttgcgcgcaggtggacaccacgtagacctgagattctccaccaaggaagaccctgaatggctcaagaaagtccggagacaggagatgagaatcatagctgattggctcaaacaatactacagtgatgaggccatagatagcatgatgaactagtcttagctgttctccacaaaaaaaaaaaaacactagtctcagctagtattataaagtagtctcactatatgtgcatgacaaattaaaattaagtagctagctaggaattaattaagtggattggttttattccatattgttttttatcattctattatttattcatacccataataataataagaagaagaagaagaaagaaagtacg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0156200, RefSeq:Os11g0156200