Difference between revisions of "Os11g0181700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0181700| Description = Similar to Short-chain dehydrogenase Tic32| Version = NM_001072433.1 GI:115484478 GeneID:4349944| Length = 2544 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0181700|
 
GeneName = Os11g0181700|

Revision as of 21:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0181700

Description

Similar to Short-chain dehydrogenase Tic32

Version

NM_001072433.1 GI:115484478 GeneID:4349944

Length

2544 bp

Definition

Oryza sativa Japonica Group Os11g0181700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4077808..4080351

Sequence Coding Region

4077838..4077958,4078060..4078294,4078847..4078926,4079011..4079164,4079258..4079336
,4079609..4079690,4079771..4079826,4079949..4080140

Expression

GEO Profiles:Os11g0181700

Genome Context

<gbrowseImage1> name=NC_008404:4077808..4080351 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4077808..4080351 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctctgggagtggccgtgggatcgccggcggcgaggcccgtcgggcttaggccccacctccaccgccgaagaggtcaccgccggcgtagacgccacccacctcaccgccatcgtcacaggagcgacgaacgggatcgggagggagacggcccgagttctggcgaggaggggggcggaggtgatcatcccggcgaggacgatggagagcggcaacgcggtgaagcagagcatcgcggaggaggtcccggggtccaggctccacgtcatggagatggatctcgcctcgctcgactccgtccgccgcttcgccaccgcgttcgactcctcccacacccacctcaacatcctcataaacaatgcagggataatggggtgccctttcaagctatccaaggatgggattgagctgcagttcgcaacgaatcatgtcggtcatttcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggcgtgcagggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgctttgatctgaacaagctaaacgataagtctaggtacaaaccactcattgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgttttcaggaagaaggatgtaatttgactgcaaattccctgcatcctggagtgatcctcaccaatatcactcgttatgtcgtcacaaacagcgtgatggtttcaatcctttctgtgggaaacctctttctgaagaacacacaacagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggcaaatacttcgcggactgcaaggaagccacgccgaggcctgctgcgagagacgcagagctagcgaagaggctatgggatttcagcgaacagctcgtggatactaatcgtcgtggagaattcaacagacaaaaatga</cdnaseq>

Protein Sequence

<aaseq>MGLWEWPWDRRRRGPSGLGPTSTAEEVTAGVDATHLTAIVTGAT NGIGRETARVLARRGAEVIIPARTMESGNAVKQSIAEEVPGSRLHVMEMDLASLDSVR RFATAFDSSHTHLNILINNAGIMGCPFKLSKDGIELQFATNHVGHFLLTNLLLDKMKS TARKTGVQGRIVNVSSIAHKRSDGSCFDLNKLNDKSRYKPLIAYAHSKLANILHANEL AKRFQEEGCNLTANSLHPGVILTNITRYVVTNSVMVSILSVGNLFLKNTQQGAATTCY LALHPELKDVSGKYFADCKEATPRPAARDAELAKRLWDFSEQLVDTNRRGEFNRQK</aaseq>

Gene Sequence

<dnaseqindica>31..151#253..487#1040..1119#1204..1357#1451..1529#1802..1883#1964..2019#2142..2333#gtgcaacacggcttgcgagcggcggcgcggatggggctctgggagtggccgtgggatcgccggcggcgaggcccgtcgggcttaggccccacctccaccgccgaagaggtcaccgccggcgtagacgccacccacctcaccgccatcgtcacaggcaaccaaccacaccttcccattgcagcagcagaatcctcttgatttggtgatttttatttattgatttggtgatggaaagaagaaaaaaacgaaatgcaggagcgacgaacgggatcgggagggagacggcccgagttctggcgaggaggggggcggaggtgatcatcccggcgaggacgatggagagcggcaacgcggtgaagcagagcatcgcggaggaggtcccggggtccaggctccacgtcatggagatggatctcgcctcgctcgactccgtccgccgcttcgccaccgcgttcgactcctcccacacccacctcaacatcctcatgtatgccacactcactcactcactcacatgattgcagtttgcaaaatgttcagaagatgaacagtttcgtgcaggggaaactcttttggtagctgggatatcagttcatttattgcatgtcaaatactacctccatattttaatgtatgacgccgttcacttttcgaccaacggacaaaaatacagagggagtaaatggttatggaaaaaaaatcaaaacaataagatagattagtacttaatatattatttaaaaaatgcaagtttaaatttgacttttaccggttgttataaaaaataataaatttgactgtaaatatgcatctactagttagagtttagttcgttattttcgttacaatttataaaaatcaaatttaaaattgcgcgtttgtggagtgataaattttatttataactatttagttaacatgtaataaatgggtagacgtctagccgggtgattgaaatccctctcctttggtgcagcacttatctgaaactgaactcccttacaaaagtctttttttcttttgctgtgcttgtctgaagaaacaatgcagggataatggggtgccctttcaagctatccaaggatgggattgagctgcagttcgcaacgaatcatgtcggtaagaatgacgcgtgaacactagttcgttgcaagtttgttacttattttttgagcatatgctgaattttacttacaagtacaggtcatttcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggcgtgcagggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgctttgatctgaacaagctaaacgataagtctaggtcagcaatgtgttcatttttattgttaccgcgtacattatcacaatgtaagtatctaaaagtattgttcttgtcctgttccgaaatttataggtacaaaccactcattgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgttttcaggtacacatttttttggccttttctcgtttatcttgttcatgatgattgatgactttgatcgttgaagaaagaattagagtttctgagaatgtcgaaaaacccgactagtagtattagcaacaattaagacaaaatgttagtgcaagcacagttgttcagtgcttgtacttgtgtggtagctaacccatttgatttactcttcattttttagtgatgaaataacagtgtggatatatcaccccttgggaaataacaatcttgattccattcaggaagaaggatgtaatttgactgcaaattccctgcatcctggagtgatcctcaccaatatcactcgttatgtcgtcacaaacagtaatgtcaacacaaacctttcttcagttattattacctgttccaacctccaaatcccatatcctctgaatatttcgcaggcgtgatggtttcaatcctttctgtgggaaacctctttctgaagaacacacaacaggtaatcgattccaatcttgttaccactcaacaatccaactgtaaaatcttcagtaactagctagtgtcacaaataagatatattttagctggcatgatgaacttcaatctaattttttacagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggcaaatacttcgcggactgcaaggaagccacgccgaggcctgctgcgagagacgcagagctagcgaagaggctatgggatttcagcgaacagctcgtggatactaatcgtcgtggagaattcaacagacaaaaatgacactgtttagactgtctgaaattctgaacctgaccatgtctcaacctgagatccttcagatacagaattttattttttatttctattttttattttttttcaatggaatgatacagcttatataatatgaccatagagctgtttgtcagtactgttgtttgcatgtgtaaacaaattcaaatgcattaataatcagcctgctttttttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0181700, RefSeq:Os11g0181700