Difference between revisions of "Os11g0213700"

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(Created page with "{{JaponicaGene| GeneName = Os11g0213700| Description = Leucine-rich repeat, typical subtype containing protein| Version = NM_001074029.1 GI:115484706 GeneID:4350067| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0213700|
 
GeneName = Os11g0213700|

Revision as of 21:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0213700

Description

Leucine-rich repeat, typical subtype containing protein

Version

NM_001074029.1 GI:115484706 GeneID:4350067

Length

3650 bp

Definition

Oryza sativa Japonica Group Os11g0213700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5891221..5894870

Sequence Coding Region

5891221..5891341,5892244..5894870

Expression

GEO Profiles:Os11g0213700

Genome Context

<gbrowseImage1> name=NC_008404:5891221..5894870 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5891221..5894870 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgacctggtgcatgattttgcaagatcaatcttatttgatgcagttctggattctggaaaaaaaatcaatattggggtaagcagttgtcgctatggaatgctcagagattgcagcaaaccactagagttggttacaccttcacctgcaaagataagagcactgcattttctgggttgtggcaaaattgagcttcatggtgttgcattctcatccgcttcatgcttgcgagttttagatttaagtggctgttccatcctgaggttacctgcttctatcggtcaattaaagcaattgaggtaccttaatgctccgggtatgaaaaatcgaatgattcccaagtgtatcaccaagctctcaaaattaaatttcctcagcctttgtaggtctcgtgctatctcagcactaccagagtcaattggtgaaattgaaggtctcatgcatcttgatttatcaggttgttcacgattaaaagagctcccaaagtcatttgggaagctcagaaggttggtgcacctaaatttgtcgaattgctctcgtgttaaagatgtatcagaatacatttgtggccttaccaaccttgaatatttgaacctatcagtgtgccgtaaaattggatttctaccgagaacattgggcagcctcacagaacttaagtatttgaacctatcaggttgttttgggataaaagaattaccgaaatcatttcagcagctaaaaaatttggtgcatctggatctgtcatgctgtaattgtgttaaagatttgtcagaagctttagatggccttgcaaaactgcagtacttgaacttatcatattgtcaccattatggaaaccagtttcgtctgagagggctgccagaagtcattggcaatctcaccagtctccggcatttgcatttatcggggttcctagacaatatatttggcaaccaatctggagtcatggacaagctcctggaaatagggtatttaaatttatcaacattccagggtaatatttttcagcaactaccaccaggtcaaagtcacagtttcattgagtgcatcggtgccctttcaaatctggagcatctaaatttgtctaataatgtcagcctttatagtgtacctgaaagtctgggtaaccttaggaagctacacacattagacctcacaggttgcattggactattgtggctaccagaaagtataagtaaaattcaaagcttgaaatatgtacttatgaaggatttgttgagacttaagtccacactatcttgtttcaacaatggcccaatcttgttgccaaactttgtggtccaagctgttgacaagaaatccagcaatcttggtcagcttcttgatgcaaaccctgctgagttggacataagtagtcttgaaaatgtgaagtccacaaaagaagcaaagggaataaaattgtcaggaaagagaaatattgtcaaactgaaatttgattggaccataggaaccaagcgatacgtggaggacatggaagtgttgagagaactagtgccgccaagcactgtgaagtactttgaactgcgaggttatcacagtacaagctttcctacctggttaatgggcattgcacactgtctccctaatcttgtcaaaattaagatagtggatttgtcgaaatgcagcatactaccacttggtcagttaccaaaccttaaacaactggttctcggtagaatgaagagcataacaaagatcgatgcggacttctgtggtggtgcgagagcatttcctcagctgaagacatttgacatatacagcatggaaaggttgcaagagtggaatacaacatactcttgtggtgaggatggtgtgactgagttcatgttccccaaccttcagtggttaagcataagtgactgccccaatttggttgtgaaaccactcccgcctagagttacgtggtggaaaatagagggcggtgaaagtgtcatatcatcatggggagggagtgtgcacactggtacatcttcatcctcttgttcagtaactaatctggtcgtcaaattctgtacgttgccgttgagtcagtggagtctgcttcaccaccttcctgccctccgtcacttaaccatccactggtgcgctgatctgactagctcaccagagatcattcaagacctccactcactcaaatcactatccctagatggaaacgaacaggcagagcttccagattggctgggtgacctcccttctcttcaagaactaaagataaccatgtatccagcgctgactgagctgcaagagaaaattaggcagctcatgtcactacagtcattgacattgtcttcttgtcagatgctgacatcattaggtgaatggtttgggagtctcacctctctccaagaattgcacatctcacactgccaaaggctgaacagtttcccagagggcatgcagtatctcacctccctcttgtcactgcatctgagttactgtgagagcatttcagcactgcctgaatggttaggaaacctcacatccctcaagacactccagatatgggaatgcagaggcatcaagtctttgccggagagcatcgaacaactcactatgcttgaacatctagaaatttctggctgtcctgaactaaagcaatgtgtttttggtagtgctgggaggctagaaggtgtcttcactaatctcaagcttgcgttacaaatccaggagcatctcggcgctatatgtgctgccatgtcactgccggcatctcaaaaataa</cdnaseq>

Protein Sequence

<aaseq>MHDLVHDFARSILFDAVLDSGKKINIGVSSCRYGMLRDCSKPLE LVTPSPAKIRALHFLGCGKIELHGVAFSSASCLRVLDLSGCSILRLPASIGQLKQLRY LNAPGMKNRMIPKCITKLSKLNFLSLCRSRAISALPESIGEIEGLMHLDLSGCSRLKE LPKSFGKLRRLVHLNLSNCSRVKDVSEYICGLTNLEYLNLSVCRKIGFLPRTLGSLTE LKYLNLSGCFGIKELPKSFQQLKNLVHLDLSCCNCVKDLSEALDGLAKLQYLNLSYCH HYGNQFRLRGLPEVIGNLTSLRHLHLSGFLDNIFGNQSGVMDKLLEIGYLNLSTFQGN IFQQLPPGQSHSFIECIGALSNLEHLNLSNNVSLYSVPESLGNLRKLHTLDLTGCIGL LWLPESISKIQSLKYVLMKDLLRLKSTLSCFNNGPILLPNFVVQAVDKKSSNLGQLLD ANPAELDISSLENVKSTKEAKGIKLSGKRNIVKLKFDWTIGTKRYVEDMEVLRELVPP STVKYFELRGYHSTSFPTWLMGIAHCLPNLVKIKIVDLSKCSILPLGQLPNLKQLVLG RMKSITKIDADFCGGARAFPQLKTFDIYSMERLQEWNTTYSCGEDGVTEFMFPNLQWL SISDCPNLVVKPLPPRVTWWKIEGGESVISSWGGSVHTGTSSSSCSVTNLVVKFCTLP LSQWSLLHHLPALRHLTIHWCADLTSSPEIIQDLHSLKSLSLDGNEQAELPDWLGDLP SLQELKITMYPALTELQEKIRQLMSLQSLTLSSCQMLTSLGEWFGSLTSLQELHISHC QRLNSFPEGMQYLTSLLSLHLSYCESISALPEWLGNLTSLKTLQIWECRGIKSLPESI EQLTMLEHLEISGCPELKQCVFGSAGRLEGVFTNLKLALQIQEHLGAICAAMSLPASQ K</aaseq>

Gene Sequence

<dnaseqindica>3530..3650#1..2627#atgcacgacctggtgcatgattttgcaagatcaatcttatttgatgcagttctggattctggaaaaaaaatcaatattggggtaagcagttgtcgctatggaatgctcagagattgcagcaaaccactagagttggttacaccttcacctgcaaagataagagcactgcattttctgggttgtggcaaaattgagcttcatggtgttgcattctcatccgcttcatgcttgcgagttttagatttaagtggctgttccatcctgaggttacctgcttctatcggtcaattaaagcaattgaggtaccttaatgctccgggtatgaaaaatcgaatgattcccaagtgtatcaccaagctctcaaaattaaatttcctcagcctttgtaggtctcgtgctatctcagcactaccagagtcaattggtgaaattgaaggtctcatgcatcttgatttatcaggttgttcacgattaaaagagctcccaaagtcatttgggaagctcagaaggttggtgcacctaaatttgtcgaattgctctcgtgttaaagatgtatcagaatacatttgtggccttaccaaccttgaatatttgaacctatcagtgtgccgtaaaattggatttctaccgagaacattgggcagcctcacagaacttaagtatttgaacctatcaggttgttttgggataaaagaattaccgaaatcatttcagcagctaaaaaatttggtgcatctggatctgtcatgctgtaattgtgttaaagatttgtcagaagctttagatggccttgcaaaactgcagtacttgaacttatcatattgtcaccattatggaaaccagtttcgtctgagagggctgccagaagtcattggcaatctcaccagtctccggcatttgcatttatcggggttcctagacaatatatttggcaaccaatctggagtcatggacaagctcctggaaatagggtatttaaatttatcaacattccagggtaatatttttcagcaactaccaccaggtcaaagtcacagtttcattgagtgcatcggtgccctttcaaatctggagcatctaaatttgtctaataatgtcagcctttatagtgtacctgaaagtctgggtaaccttaggaagctacacacattagacctcacaggttgcattggactattgtggctaccagaaagtataagtaaaattcaaagcttgaaatatgtacttatgaaggatttgttgagacttaagtccacactatcttgtttcaacaatggcccaatcttgttgccaaactttgtggtccaagctgttgacaagaaatccagcaatcttggtcagcttcttgatgcaaaccctgctgagttggacataagtagtcttgaaaatgtgaagtccacaaaagaagcaaagggaataaaattgtcaggaaagagaaatattgtcaaactgaaatttgattggaccataggaaccaagcgatacgtggaggacatggaagtgttgagagaactagtgccgccaagcactgtgaagtactttgaactgcgaggttatcacagtacaagctttcctacctggttaatgggcattgcacactgtctccctaatcttgtcaaaattaagatagtggatttgtcgaaatgcagcatactaccacttggtcagttaccaaaccttaaacaactggttctcggtagaatgaagagcataacaaagatcgatgcggacttctgtggtggtgcgagagcatttcctcagctgaagacatttgacatatacagcatggaaaggttgcaagagtggaatacaacatactcttgtggtgaggatggtgtgactgagttcatgttccccaaccttcagtggttaagcataagtgactgccccaatttggttgtgaaaccactcccgcctagagttacgtggtggaaaatagagggcggtgaaagtgtcatatcatcatggggagggagtgtgcacactggtacatcttcatcctcttgttcagtaactaatctggtcgtcaaattctgtacgttgccgttgagtcagtggagtctgcttcaccaccttcctgccctccgtcacttaaccatccactggtgcgctgatctgactagctcaccagagatcattcaagacctccactcactcaaatcactatccctagatggaaacgaacaggcagagcttccagattggctgggtgacctcccttctcttcaagaactaaagataaccatgtatccagcgctgactgagctgcaagagaaaattaggcagctcatgtcactacagtcattgacattgtcttcttgtcagatgctgacatcattaggtgaatggtttgggagtctcacctctctccaagaattgcacatctcacactgccaaaggctgaacagtttcccagagggcatgcagtatctcacctccctcttgtcactgcatctgagttactgtgagagcatttcagcactgcctgaatggttaggaaacctcacatccctcaagacactccagatatgggaatgcagaggcatcaagtctttgccggagagcatcgaacaactcactatgcttgaacatctagaaatttctggctgtcctgaactaaagcaatggtgtgaattagaggatagcaaaacgaagcttgctcacataaaaaataaagtatgcactctatcagttactgttatattcatctttgtactgactattattattttattcatcttagcatagaatatttgtgtttagcatttcttagaggatactttatgtggatatgtctagattttaatatgcatagtgatgttattcttcttttggacacaaacatgcaagtagatatatcaagaggacaaatacatataaaatattcctaataaataatattccatctagtaaaaaaatgttgttttggacatataacatattaacattcaatacttttagtaccagtatcttcaatattttaattggtatgtctaagtcgcatttatatatttctctcatgtagtagttctctataatattataatttggtcaccaaagctgttcatcaattgccttttttctaaaatttatcagtcgattaaagtttcattgcatataacctaaatttgcaatctgaatactgcaacttatacatttgttgcaacttttagtttatgttgtattttatttcctggattaacctagatgcatttgtatgcttttgtatacatttataccattttataatggaatcattgacagcaaattaaagtatgatttttaatcttagttagaacattctttgtttctcagcaagatatatgaaatattgatatatgagtatatgactttttagatgttaatctagtgattaaaaagctattaacagataaggaaaaaccagttgtttggtaaaaagattgcatttatctatatgtatatatagatactagtatcatagaaacttatggtcaaactagtattttgaacatttgtgaccagaaaaatgacttcgttttttttgcagtgtttttggtagtgctgggaggctagaaggtgtcttcactaatctcaagcttgcgttacaaatccaggagcatctcggcgctatatgtgctgccatgtcactgccggcatctcaaaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0213700, RefSeq:Os11g0213700