Difference between revisions of "Os11g0247400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0247400| Description = Hemolysin A family protein| Version = NM_001074146.1 GI:115484940 GeneID:4350198| Length = 4424 bp| Definition = Or...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0247400|
 
GeneName = Os11g0247400|

Revision as of 21:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0247400

Description

Hemolysin A family protein

Version

NM_001074146.1 GI:115484940 GeneID:4350198

Length

4424 bp

Definition

Oryza sativa Japonica Group Os11g0247400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7966551..7970974

Sequence Coding Region

7966668..7966829,7967111..7967155,7967317..7967403,7968434..7968562,7968683..7968839
,7968936..7969038,7969712..7969791,7970306..7970393,7970760..7970796

Expression

GEO Profiles:Os11g0247400

Genome Context

<gbrowseImage1> name=NC_008404:7966551..7970974 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7966551..7970974 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatggtggcttccaggctccgattccaccagcttaggctgattggggtcaggccgacctgctgctctccgtcccgggatttcgcggcggtgagaacccaaaagcttcagctcgccaagaagaaaagacgattggatgaagtgtgccttgagagatttcaacagtatagcaggacgtacatccaatcatggattcttcagggtaaggtccttgtggatggaagggttgtgaataaagctggaacacaagtatctgacaagtcgatcatagaaatcaaggctgaaattccaaaatatgtatgtagagctggtcataagcttgaggcggctatcaaagaatttggtattgactgtgatgaaaaggtagcccttgattcagggttatccactggcggttttactgactgtttactccaacatggggcatcacatgtatatggtgttgatgttggctatggacaggtggctgaaaaaattcgagtgcatgaacgtgtttcagtaattgaacgtacaaatttaagatatcttactgaactgccacagctggttgacttggtgaccctggatctgtcattcatctcaattctcttggttatgcctgctgtagtcaaagtaatgaagacagactcgacattgattacacttatcaaacctcaatttgaagctcgtcgatctcaggtaggaggtggtgggattgttcgggaccctctggttcataaagaggtgctagataggataatttcaggcgtagagcagtttggattctgcaacaagggctggattgaatctccgataaagggcgcggaagggaacaaagagtttcttgcttgcttccataggatcccagtgcaagaattgcagccggaggaagcaaagtcaacatga</cdnaseq>

Protein Sequence

<aaseq>MMMVASRLRFHQLRLIGVRPTCCSPSRDFAAVRTQKLQLAKKKR RLDEVCLERFQQYSRTYIQSWILQGKVLVDGRVVNKAGTQVSDKSIIEIKAEIPKYVC RAGHKLEAAIKEFGIDCDEKVALDSGLSTGGFTDCLLQHGASHVYGVDVGYGQVAEKI RVHERVSVIERTNLRYLTELPQLVDLVTLDLSFISILLVMPAVVKVMKTDSTLITLIK PQFEARRSQVGGGGIVRDPLVHKEVLDRIISGVEQFGFCNKGWIESPIKGAEGNKEFL ACFHRIPVQELQPEEAKST</aaseq>

Gene Sequence

<dnaseqindica>4146..4307#3820..3864#3572..3658#2413..2541#2136..2292#1937..2039#1184..1263#582..669#179..215#ggaccgagcgagaggagagaaggggcgccgccgccgccgccgccgcccgccatccgcgccgcttctccttctcctacagcatatatatatctcgtcggcgaactgagatagggtaactgagattagggttttggctcggagggggagtggagcgggaggaggaggaggaggcgaggcgatgatgatggtggcttccaggctccgattccaccagcgtaagagctcttcccatctctctcctgcttttcttctcctcctcctcctctctcgctagcctcctctgttctagtagttgcgagaccaaatctttcttcttgttatctgtggatagcctggctcttacagaaatcggaaacaaagaacagggcaggcagggtgtattggttggggaatcaagtggtgaataggagtactagttaaccggtttatcccttttcatccctgaacctgtggtgtgtttgttttgcgtagttgggaagatgttgagaggggagctaggtagcatgtgctgcctccaatttcttgatttctggaagagagctttcaaatggttaattaaggtgtggcttttgctttctcagttaggctgattggggtcaggccgacctgctgctctccgtcccgggatttcgcggcggtgagaacccaaaagcttcagctcgccaagaagtaaggcctctgaatttatttattttttcactgcactgttgttttactttgttcaaatctgcttttatgtgcttgtgttaggtaatgccgggtagttcatatctagtgccgagtaacttaagctttggttcatatagcaaaatgttatgtggctctgcttatgtaggctttggttccagattccctattttctgtgtgtttcttcattcgcaaactagttgttgatattgtgcatacaacagtcgtgcggtgcctgctctgtcatggtgtggccacattgagaggttatactccagtgtttttatttagaagtgtgaagtgtaagaaattctctttaaatctaacaatttgtttcttaaagttaaatggtcaatatcctagttttgttaaatcagagactcaattaccgtaaagaaagtagcggcaatggctcaatatcattattgtgatggtattttgtatcgtgcaattagtttgttcaaccaacgttgtcacttttggtcttcttactcaggaaaagacgattggatgaagtgtgccttgagagatttcaacagtatagcaggacgtacatccaatcatggattcttcagggttagtcctttacttcattgattttatgcatttagatctttacagctatgaattggtttggcactttatacttcatatggtaataacactgcttcaaaaggcaatctcagctatcatgtcatgccaaataatgcaaaactcaatgcatgccttaatcatgtcatgattattcaactttcctgacatatgagaatggtctgtgacacttgatcatatatattttgtcctaagatcagtggacatcgaaatgaactgttcacttctaaggggaagctatattagaggcacacttatgccaccttaagcttaatgtatcattatttaacaacaattatctgccctcatgtttcatggcacttttacaatataactttacatcatattcaaatatatcaaagtaactgagtttggaacaaagaaaatattagcaccataaatttgccccttcccccctttgaatttcatcagtgaaaagcttatagaagttctccctactgcaacagattgtatgatatgcgtactcaaatgtgtttctcatgctattgccacatatgacatctaccaggaaattgcacacttcacctttcagctatgactttttaaccatgtacataagtatattttgtatgtaaagcaaacctaataaagcattctctgttatgtcaaatttcaggtaaggtccttgtggatggaagggttgtgaataaagctggaacacaagtatctgacaagtcgatcatagaaatcaaggctgaaattccaaaatatgtatgtaggtgatgctcgaactgattggcttactttgctatcaaacaaaagtaactccagtttgtccagtttataattgtgtcatctgtcctgatcaaattcagagctggtcataagcttgaggcggctatcaaagaatttggtattgactgtgatgaaaaggtagcccttgattcagggttatccactggcggttttactgactgtttactccaacatggggcatcacatgtatatggtgttgatgttggctatggacaggttgcgctactcccttaaaagtttatttttaatctaaccgctatcacattatttgtaagctgcaggtagttgttacaagattacagcagcagaactataatatgctccacttcatttcaggtggctgaaaaaattcgagtgcatgaacgtgtttcagtaattgaacgtacaaatttaagatatcttactgaactgccacagctggttgacttggtgaccctggatctgtcattcatctcaattctcttggtatgatttggtgctgcctttttaatgtctgcatgattgtccacttgcacaagtccttttagcagagctcttataatatgtcactgtttcttaactgagaataccatttccctatgttattgaaaaatacactgggttattttacatcgttctgttctttagttggtgtttctgcacaaaacattccttgtactattcatttgtatggttagtatgatatacttaggatcatgatctgtgtgttcttgtaaagttgtctggtatatacagtaaaattgacccaatcaactacatagacttccagtacttaaatgcatctatatattgtatgctgcatatatcatatgcaggaatgtatattcatgtgccctgttatcttaactatggttgcttgactagatggctgttatcttatatgtagttacagtttctatctagtaatcttatagatattgtcttatctggtttagaatgttatttgcagcagttgaaggtttagattaatttgtgacgtctagcctgtataacgatggcattgttttctcattaagcaatgaagatgatttagtctagtttgtagtttctcttccaaggtctccttagaaaaccgacgctgcttgattgtcctcccagcaatgtttagtatttagcgcataatgatctaagtatcattgcttgagaccggcgcgacatccttcatatcgttgtatttaaaactttttttccctcaatcttaatgaaattggccggccaatctttggccgacccagcaaaaaaaaagtatcattgcaatagagttcttgtatagtcaattagctcatcttgctgaagtaatagtgcattgggaaaaaatagtgtgcttttggcgtccatggctgccgatgctcctactgacctatgtagttcaagttcatgatgtttttgatgttctgcaatcttttccaaatataagatgataagatcagcagcttcgataaattattaaagcacatgctatccattgttcactgacgttacctgtgaaatcaaggttatgcctgctgtagtcaaagtaatgaagacagactcgacattgattacacttatcaaacctcaatttgaagctcgtcgatctcaggtatcaaacaaatggtcttagtttttcttttcgaacgttttgattgaatatcaattggaaaagaatgtataatcactttcatagccttcagatctcttcatacatgcacagtgatagaaataagcaagccactaacagcaaatcctttttatcctgttcaggtaggaggtggtgggattgttcgggaccctctggttcataaagaggtaatatgatttgctgccttttttgtgcgtccccatcataaagcttcacattgaatataggaatgagctacttccttaaaataaggttgctgtttattcctgaaattccaccagacaaatagtttcacttgtaagcaagaaaagaccccccaaacaaatcctttgattatatcctgaaaagatcccatttcagcagtgtctgattgttgcctcattttacttcacgattcttcccttgagttctgatcggagtaccaacatattccattgattggtcacaggtgctagataggataatttcaggcgtagagcagtttggattctgcaacaagggctggattgaatctccgataaagggcgcggaagggaacaaagagtttcttgcttgcttccataggatcccagtgcaagaattgcagccggaggaagcaaagtcaacatgattatttgtacctaatgccatatctagttcacatagaatagctggagaatactttctgatctttttaccaaggatgttacttcaaattggcataatgtgatgtgagaatcccttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0247400, RefSeq:Os11g0247400