Difference between revisions of "Os11g0265400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0265400| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001074191.1 GI:115485030 GeneID:4350245| Length = 5004 bp...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0265400|
 
GeneName = Os11g0265400|

Revision as of 21:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0265400

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001074191.1 GI:115485030 GeneID:4350245

Length

5004 bp

Definition

Oryza sativa Japonica Group Os11g0265400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9118316..9123319

Sequence Coding Region

9118463..9118541,9118664..9118719,9118838..9118871,9119861..9119959,9120073..9120221
,9120408..9120446,9120530..9120622,9120712..9120810,9121427..9121528
,9121960..9122043,9122436..9122501,9123125..9123211

Expression

GEO Profiles:Os11g0265400

Genome Context

<gbrowseImage1> name=NC_008404:9118316..9123319 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:9118316..9123319 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcctccccgtcctcgcgcccctcgccggcgccaccgccgtcgccttcctcctcttcaagttcgccaccgtcgatggggatttcacgctggtctcgcgcggggcgccgcggcgggagaaggtggacgggaaggttgtgtggatcactggagccagccgcgggataggggaagttcttgcaatgcaatttgctagtttaggagcaaagctgatactatctgctcggaacaaggaggagcttgagagagtgaaacataacatcatcaacaagcatccaaatagcagagttgaagtattacccatggatttatcatcgggtgaagagtctctgaaagagcatgtacatgaagcagagtcactcttctccaatgcaggcgttgactatatgatccataatgcagcatttgagcgtccaaaaaggagggctctggaagaaactgaacaaggtcttaaggctacttttgatgtcaatgtctttggtactattactctaactcgccttcttgcaccctcaatgatggatagagggatgggccattttgttgtgatgagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaaacatgccctcaatggctatttttcttctctgcgctctgagttatgtacaaaaggcattaaggttactgttgtctgtcctgggccgatcgaagcaccccaatcttctggtgcaacctcttcatcacaaaaaccatcttctgagaaacgtgttccagttgaaagatgcgctgaactgacaattgttgcagcaactcacggactaaaagaagcatggatatcatatcagcctgtgctaggggttatgtacttggtgcaatacatgccgacggttggtctctggcttatggacaaggttggtgcaaagcggctggatgtagcagcaaagaaaggcaatgcgtacggttggaatctccttttcggtggcaagaagtcagcatga</cdnaseq>

Protein Sequence

<aaseq>MVLPVLAPLAGATAVAFLLFKFATVDGDFTLVSRGAPRREKVDG KVVWITGASRGIGEVLAMQFASLGAKLILSARNKEELERVKHNIINKHPNSRVEVLPM DLSSGEESLKEHVHEAESLFSNAGVDYMIHNAAFERPKRRALEETEQGLKATFDVNVF GTITLTRLLAPSMMDRGMGHFVVMSSAAGKVPSPGQALYSASKHALNGYFSSLRSELC TKGIKVTVVCPGPIEAPQSSGATSSSQKPSSEKRVPVERCAELTIVAATHGLKEAWIS YQPVLGVMYLVQYMPTVGLWLMDKVGAKRLDVAAKKGNAYGWNLLFGGKKSA</aaseq>

Gene Sequence

<dnaseqindica>148..226#349..404#523..556#1546..1644#1758..1906#2093..2131#2215..2307#2397..2495#3112..3213#3645..3728#4121..4186#4810..4896#accgttgataacttgatactctcccgatttgacgaacgcaaagcacgcacacgatgaggctcacgacgaaatcgaaaagccgctgcttagactgaacacaccacacacgagcacgagcacggagaagtcgagagagagagaagagagatggtcctccccgtcctcgcgcccctcgccggcgccaccgccgtcgccttcctcctcttcaagttcgccaccgtcgatggtaacccttcccatctcctcccttcattcctccccctttcttttagtacacccagcggcttgtttgggtgggactaatccaatcctccttgtggtgtggttttggggccggccggggcgcaggggatttcacgctggtctcgcgcggggcgccgcggcgggagaaggtggacgggaaggtttggtcttcttcttgggcttcttgtgatttgcctctcgttgggtggttttttttttttcgctctctctagatttgacctgcttcgcttttggttttcttgattgattgcgtttcaggttgtgtggatcactggagccagccgcgggataggtgagtgcggtccttgttctgctgaatttgctatgaatttggttttactgttaaaccttgtttactcatgagtaatcaccagtacggcactcgatttatgttctacggattggtcatttcgtttgatgcacgcactgcttattgatagggtcactattccccaaattcagaagggttgcatccgtcaatgaaatgatacgatacatctctcgtttctgaacttattgataatgatatatgatacacctgtcatttgttatcttgttggtaaacaattgtgtggttaggggagggtgaattgaatagacttgggcttcctgggtatctgtctgacaagttttggcatgttcatctataatgtcattattgtgtgtctgattgagtggcaaactgatgttttttttttcaatagaaatattgtttaagtgtgctttccattttccatggagttgatgttatttcaatccaattacctagttctacaaatatctcaatttgtacaaatttcatatgtctgtagttgcactggtcatataggcagagtacttgtccaaatcgatactgtagatatgtaaataggacttgtatgggaaaagcattgtttctagagcctagactgctaagctaaagctagtttatttatgctctgagctgaatataagcaaaccctttctgttgcttctctgtagttaagttgtttactaagccagattgaggacatatgcaccaggaatctgtaaccttcctcataaatcagtaatatcagcatttgggtgtatgttttattgatgaatagtgttttcaacattaaatggacattcatcaatatgtttgtcccattgtgctattgtatggtcaatgatactatggaccatgcatcaattttgtagttctggctatttttacatatgttttatttaagctaaataatgtgaaagttgcatagtatttcaccataataagctatctatggtttatcataatatcaggggaagttcttgcaatgcaatttgctagtttaggagcaaagctgatactatctgctcggaacaaggaggagcttgagagagtgaaacataacatcatcagtaagttgaaaaaatgatctaaactattacttttttatctttgtttagtggacagtggaagtctgaagttctgttcaagtctaagttacctttgttttcctcttacaccaaagacaagcatccaaatagcagagttgaagtattacccatggatttatcatcgggtgaagagtctctgaaagagcatgtacatgaagcagagtcactcttctccaatgcaggcgttgactatatgatccataatgcagcatttgagcgtccagtaagtatcattaagctcatttcttcttgcttcctaaatcccttcaaatcaatggcccatatcttttctgggtcaatttgtttcattttgtcagccttttaggaatcttgtaagctgtatatctgccccttagcatcatatactatgatcactttatgcttactgaatgtacaaatttaattgcagaaaaggagggctctggaagaaactgaacaaggtcttaaggtataggaactgtgtttaacttctttctttcatgtatccttatctgcaaccttacttcctgcaaaatgtttcttgttaggcaggctacttttgatgtcaatgtctttggtactattactctaactcgccttcttgcaccctcaatgatggatagagggatgggccattttgttgtggtatgtctttacaattcagcaccaatcaattggaagttagtcaacatagtttcatcaggatgttactgtacttaattcatcatttacagatgagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaaacatgccctcaatggctatttttcttctctgcgctctgaggtagaatattatgcagttcttattaagcctgaacaatcctacattgtcatagcatgcaaattatatgaatatgagttaatcacttgtgttaaccaagtattatggctaattatttctcccttttgtcaaaactctagtgtgatatttttgtgattaaaggaatttcttatcagttatatacccttctcttgtcaattgtttaatatcttgtatgcttattatattgtattgcaaacggtgttctaaaaatcggctttaggcactaggcagccaccatgagttttcattaggcagctgccctgccgtgggcgctctagtgctgttgcatgttacattaatgttctgttttcttttatgtcatgcttactaattgcttggaagcccctggtcaagtttttttttttactggaaggactgccagggctttgcacagcagtatattttcattagaaaaaaaaatatagcccctggtcaagttggtccttggtgttaggagctagccctgtggagtgcggagcatctaacgttgagcgcctttttgaacattggttgcaaatcacaaaaaggttgttcaatctatttatgtttatgaacttatcaactatgtttgctgcagttatgtacaaaaggcattaaggttactgttgtctgtcctgggccgatcgaagcaccccaatcttctggtgcaacctcttcatcacaaaaaccatcttctgaggttacaattttctacagactttcttgatttttgcagacaaacaaaagggttggttcactagagaaaggcatggaactatgcaagggtctttgctcaatcagtattatgatcctagtgcgatccaataggagccaattcagccatatacattcgttgcatacttgcattgctatttgttggaaaggattcaatatgagcaaatttagtttatgtggttcataatattataataatttatagtgtgttttatatagactatttttttcttatagctcaaaaagttatcttgtgtctagatttactatagttcttttctggtacttgttatgacacattatttctcttttcctaaaatcttgtaaccaatttgctttacggattgttaaaagctggttgttagtcccttttatttatccatgattcgcctgcagaaacgtgttccagttgaaagatgcgctgaactgacaattgttgcagcaactcacggactaaaagaagcatggatatcatatcaggtttatttcgttttcaacctatttgcttgtactatggcagaaatttatcatcatggcagaattttatcatcatttacaactttaaagtagaaaacaatgcctcatgtttccttactcttaaataacagattcatgggtacatgtctctatgcttgactgtctgtacctaaacatcaaatatcaagttagcctcaagcatgtataagcaacagcatttcataattcatatcactagcaatggcagccccccttactgttattgctatgcgtactgtactaccagcattgcatataatttatttcaacaatctgcagatctgggttcatatttacagaccatttttttcaattatatcgtcattgtgaatttttttttgtggttttgtttgcagcctgtgctaggggttatgtacttggtgcaatacatgccgacggttggtctctggcttatggacaaggtatttcctatcttaccatattttattgtagtcatttttcttttcatagtggtaaagctttatccacaactatatcctctggtcacaaggaagaccttcaacatgacttttgaacttggtatttgagctattatatcataaatattcagattttgttacattgaaatgacgtgtgcatattcttccacataatacttgtgatgttacacatctatgaattttattatgtcccgacttggaggctggaaattgaaaaaaaataatatatgtgagtgtgcctagttgcaactttatagactgccaccatcgagacttggttaacaaagtgttgataaataggaaaaacaagagagaaaacagttattttgttctttgagtgactactgttgtacaaagtctcaaatacatgatcatttgtaccaatttagcggtctaaaataaatcataaacattaagcaatacacaaggaaatttataatctgaactgttgagtcaattatttgttgtatctgatcactagtatagaggcgccctgtgcctttttttttgcattctattattatcttgaaatatttctcatcttacagttttctccactatttattatttaaaattttatacaggttggtgcaaagcggctggatgtagcagcaaagaaaggcaatgcgtacggttggaatctccttttcggtggcaagaagtcagcatgatgaagttgtccaataataggggagtcaaaatggctgtataaatttgtggattctgaacatacggattttggtatttacttttactactgttacagtagcaccttacct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0265400, RefSeq:Os11g0265400