Difference between revisions of "Os11g0545000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0545000| Description = Conserved hypothetical protein| Version = NM_001074589.1 GI:115485826 GeneID:4350687| Length = 3928 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0545000|
 
GeneName = Os11g0545000|

Revision as of 21:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0545000

Description

Conserved hypothetical protein

Version

NM_001074589.1 GI:115485826 GeneID:4350687

Length

3928 bp

Definition

Oryza sativa Japonica Group Os11g0545000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21913705..21917632

Sequence Coding Region

21913998..21914210,21914297..21914491,21914783..21914959,21915376..21915543,21916404..21916445
,21916543..21916658,21917492..21917603

Expression

GEO Profiles:Os11g0545000

Genome Context

<gbrowseImage1> name=NC_008404:21913705..21917632 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21913705..21917632 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaagcggcgtcgcggggttcgcccccctcctcccgatccttccccggctccggcgacaatcgactatagccttacttataaggagatagccgccagtggggctccaggtgctgtggactttgtgaagaatcatggcttgtacttgctgctgcttgagacaccctctggcttctcaattttctctctttgtggggtctacatccacttaccagatgcgatacaaaatatttgggcgatgttcggtacttacaggtcttcacatgacgttatctggctgaaggaatttcagaaatttgatgacaagtctagcgccattaatgttgatactggtgttaacaaacagcttactgagatgatcatgaagtggcgtcgccctaggcagaaattggttgttggaaagccggagtataaatcaatcattgaaaataccttaggaataccctgcctgtgtgatgaagttgtgatggacgtaatgtgggccatgaagcgtctcattcgctattttgtgcccactgaaacacccgagctggctgaagaggacagcctcactatgagtcaaggactacggatgtttttaagtcgttatggctttgaaatcaaaccagagatggtctacaacgatattgttcgtgctgcatccatcgtgtttaggtgtgatgctgttgaggacctttacgagcacttgcaacatcttggtcgccacctcaagaatgtgtctggcattgactatgagaattggggcactgtgaaactcgcgacagcttttaagatcatatgcagccgcaaaattgataaatctgatgagatgttttcagacgacgtgcgatcgaagttgctggatgatgcagataaatacaaagatcttgttttttcgacaggttgcattgcaaactataaaaaaattttaggtctcaatatactcaggaatgataaaatggatcaattggctgagttggttaaggtagctaggattaaagctgaacacgtgagggtgcctgagaatgtgcctgagaactaa</cdnaseq>

Protein Sequence

<aaseq>MPKRRRGVRPPPPDPSPAPATIDYSLTYKEIAASGAPGAVDFVK NHGLYLLLLETPSGFSIFSLCGVYIHLPDAIQNIWAMFGTYRSSHDVIWLKEFQKFDD KSSAINVDTGVNKQLTEMIMKWRRPRQKLVVGKPEYKSIIENTLGIPCLCDEVVMDVM WAMKRLIRYFVPTETPELAEEDSLTMSQGLRMFLSRYGFEIKPEMVYNDIVRAASIVF RCDAVEDLYEHLQHLGRHLKNVSGIDYENWGTVKLATAFKIICSRKIDKSDEMFSDDV RSKLLDDADKYKDLVFSTGCIANYKKILGLNILRNDKMDQLAELVKVARIKAEHVRVP ENVPEN</aaseq>

Gene Sequence

<dnaseqindica>3423..3635#3142..3336#2674..2850#2090..2257#1188..1229#975..1090#30..141#aagacgcgcgtccgccgccgcaactagcaatgcccaagcggcgtcgcggggttcgcccccctcctcccgatccttccccggctccggcgacaatcgactatagccttacttataaggagatagccgccagtggggctccaggtgagcccgtcccgtcgatatatctatctatttgtcatccgctctcgatctctcaatttcacacgcctttaggtaggagcgatgacaatggaacttgaaaccctacactacaccagatgcacacacatacatacatacatacatgccgtgggggaacacactgtgactgtagatcttggcgaggcgaattgatttcatttccaccttacaagtgttagggttcgtggattcgatttgggggtgcagggtggtgtgtgcacatgtgtgggttagaatattgttatgtttgtggtggttttcgcggatctggactggagaaggggagggcctttatttcgattttgctatatctcactcgaaagattttttttgttatctctcacacgattctcactcaaatttacagggtattttcttgtaagttacagtgtaatttatgaaatttacattgtaacttttgtaagttacagtgtaatttttgaatctttgtatgtaagttttgaaatttatattggatttggtttttttttaagatatggcaatttagtgtccattatggtgtttttagttgctttttaccttttactgtgtctattctgtgtgatatgatcataaaaatctttcgaaagatgcatatttactcccccgtacttttcccttggtaatccagtttgcttactcaattttgctccacttctgtgtcgttcacagtgtctattctgtgtgatatgatcataaaaatcttcgaaagatgcatatttactccctcgtacttttcccttggtaatccagcttgcttactcaattttgctccacttctgtgtcgttcacaggtgctgtggactttgtgaagaatcatggcttgtacttgctgctgcttgagacaccctctggcttctcaattttctctctttgtggggtctacatccacttaccagatgcgatacaagtaggagtacttctatcttccttctttcctttttggttaaataatataatatatgtgctagcttactcctgtcgttgtgttcctttatattatccagaatatttgggcgatgttcggtacttacaggtcttcacatgacgtgagtggcccttctttcgtttccttcccattgttttgttgccaaatcaattagtagcaatgttgcatcatttgtgattgatgcattctttttcttttttctgtttgtgtcgagggagcgtaaacacaatcttctggtttattatcatgctcaaaaacatttccaaactccccccccccccaaatttctccatgtaaatcatatgccctaaaattgcttacctgctactctctctgtttcatattgtaagtcgttttgactttttttcctagttaatattttaagtttgaccaagtttttagacatataataacattttcaacacaaaacaaacatattataaaaatatattcaacgatacatttaatggaactaatttagtgtagtagatattgctattttttcttataaacttggtcaaacgtaaaaaagtttgatttaaaataaagtcaaaatgacttgtaatatgagacggagtgagtaattgctagtagcttggaatgattgagaaagtcactgtattcgagcgagtgaggcaacacaacatgagatggataacacgtgattaagggagaatatcacaaggaaattggcaagataaaaggaaaagatgataaaaaggcccactaggcatcaacatcagcttaacaaccattctgtgttttattttcaaatacacgttgtcaccttagcatatgaaacttttctgaattacactgtaaagatgtgataaacaagggcttgaatgagggtattttagatgtacctgctgaactgagactgattgagacatttcatgataattggttaattatttctttctgcctctcaacgtgctcatctttgtctttctttaccaggttatctggctgaaggaatttcagaaatttgatgacaagtctagcgccattaatgttgatactggtgttaacaaacagcttactgagatgatcatgaagtggcgtcgccctaggcagaaattggttgttggaaagccggagtataaatcaatcattgaaaataccttagtgagtaaatataagaccctcttttagatgggacgaaaactttcaagtccctatcacatcagatgtttggatactaattataaatattaaacgtagactattaataaaatccatccgtaatcttggactaattcgccagacgaatctattgagtctaattaatccatgattagcctatgtgatgctacagtaatcattctctaattatagattaattagtcttaaaaaatttgtctcgcaaattagcttttatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaatacagagactaaagttaaatccctggatccaaacaccacctaagctccttgtttgcctatatatgcgaacaactttgagcttcatttcttattgtttcttttttcagggaataccctgcctgtgtgatgaagttgtgatggacgtaatgtgggccatgaagcgtctcattcgctattttgtgcccactgaaacacccgagctggctgaagaggacagcctcactatgagtcaaggactacggatgtttttaagtcgttatggctttgaaatcaaaccagagatggtgagtttacatgctctgatttatatagatcccctatcatttagtttctgtttggttggtagccattgaatgccacagcaacagtgtttttgccacagcacagtgatttctaaggcgggaaaaggtccgccataggtctgtggcgagccgcgctgtggcgtggcaatgtttggctgtgatccaaacagagccttagtgttacattttataatggcttgtgagcacacttggaatccttcattttttcttttagtgatgaagcaacgctcttaattgatttgtatccaacaggtctacaacgatattgttcgtgctgcatccatcgtgtttaggtgtgatgctgttgaggacctttacgagcacttgcaacatcttggtcgccacctcaagaatgtgtctggcattgactatgagaattggggcactgtgaaactcgcgacagcttttaagatcatatgcagccgcaaaattgataaatctgatgaggtaaagccatatatactgaccatgtaaatgttatactgaccaggtaaagcctatctgatgaggtttgtgccttgtctctcttgcagatgttttcagacgacgtgcgatcgaagttgctggatgatgcagataaatacaaagatcttgttttttcgacaggttgcattgcaaactataaaaaaattttaggtctcaatatactcaggaatgataaaatggatcaattggctgagttggttaaggtagctaggattaaagctgaacacgtgagggtgcctgagaatgtgcctgagaactaagatcactacaagcttgctcaatatctcgctgaacctcttgcaggctaaataatttggtttgccagttaggaagcgtttggtatgcatgtggcttaatccagattcttctgagtgtcgaggttgtgatctcggttggcttaaacattattgtgcatcttttgtaaatctagtctggtatttgagaagctaaggtccgtgctatccaaaactttgcatcgtttagctgtcaaacaaatgaccgtgctcagtggtgattaacgtgctctgtgatgaatgacgatcttgatttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0545000, RefSeq:Os11g0545000