Difference between revisions of "Os11g0600700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0600700| Description = Similar to RING domain protein| Version = NM_001074756.1 GI:115486160 GeneID:4350860| Length = 6538 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0600700|
 
GeneName = Os11g0600700|

Revision as of 21:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0600700

Description

Similar to RING domain protein

Version

NM_001074756.1 GI:115486160 GeneID:4350860

Length

6538 bp

Definition

Oryza sativa Japonica Group Os11g0600700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24908518..24915055

Sequence Coding Region

24909271..24909516,24911441..24911512,24912304..24912368,24912493..24912625,24912972..24913052
,24913174..24913263,24914529..24914678

Expression

GEO Profiles:Os11g0600700

Genome Context

<gbrowseImage1> name=NC_008404:24908518..24915055 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24908518..24915055 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaccatgtggtggtgaatgtggaaggcttgggaaacgatggaggggctgtggagaagccatctgaggccgtgaacagctcagtggtggctgctgcgtcgctttctacgactgttgatacggtcgaggagggcggtggagaggaggagccgctcatccaggcggcggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgcttgcagtggcagcctcaagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattacatgtgaaatctgtcatgagcaatataagcatggatacacagctccacctcgtgttgaaccagacgataccatcatagatatcggtggtgattgggcacgtgacccaagaattattgctgtagcggctgcacaacgtcgtcttcttgaaactgagtatgatgaatatgctggtactgatgctagtggtgctgcattctgccgttctgctgcacttatactaatggccttgttgctattgaggcatgctttgtctatctcagacaatgaaggagatgatgatgcttctaccatgttctcgctctttctacttcgagctgctggatttctgctgccatgctatatcatggcttggatattcagtattttgcatcgccggcgacaaagacaggaagcggctgcaattgctgcagcagaggtggcattcatcctgcaatcagcccaaggccatgcccttcagttcaccatcgctccagactcccccgccactccacagcatgagccacagcagcagcagccgcagccgcagccgcagcaatag</cdnaseq>

Protein Sequence

<aaseq>MGDHVVVNVEGLGNDGGAVEKPSEAVNSSVVAAASLSTTVDTVE EGGGEEEPLIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCE ICHEQYKHGYTAPPRVEPDDTIIDIGGDWARDPRIIAVAAAQRRLLETEYDEYAGTDA SGAAFCRSAALILMALLLLRHALSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWI FSILHRRRQRQEAAAIAAAEVAFILQSAQGHALQFTIAPDSPATPQHEPQQQQPQPQP QQ</aaseq>

Gene Sequence

<dnaseqindica>754..999#2924..2995#3787..3851#3976..4108#4455..4535#4657..4746#6012..6161#gaacgaaacacgccttcttccccaacgaccaaaccaaagtttgggtgaagaaaaaaaaatatcgccgcgtttttatcccccacgagacgagtcgagacgaccaaaagcctaactaatcgggggcaagacgaggaggagagcggattctcgtcggcttcggcgaccggaagaggagaggagaccgaccccgcgccgtgttccgccgccgccgccgccgccgacgacgacgacggcaagtaggtgcgtgcgatccccttccccttctctttgcgcggagcccgtcgccgagcggcgcggcggtggggagtccgttgatgtgtgtggtgccgcccgatttgggggtgatgtgatgtggtgtggtggctgctcttctacggtggaatcggggagagattcgcgttgttatggcgctgattcggtagggattgggtgggttgttcgtatgatccgcgctcagaaggggaattttgctgtggagagttgggggggggggggttggttgtagctagggtttcggtcggggacgggctctagtctctagagagttttagagtagtccaatacagtaaacggagtggtttttatttttcaggaattttcgctttactgcccgattcgaactatgcccatttttagccatcctcttgtgcgagtttaccccgtattgaccaatggcgttgtttgccttgttggtttcttgcaggaatttgattctcctggggaattaacttgttaggagaaaaggaatttgggatgggcgaccatgtggtggtgaatgtggaaggcttgggaaacgatggaggggctgtggagaagccatctgaggccgtgaacagctcagtggtggctgctgcgtcgctttctacgactgttgatacggtcgaggagggcggtggagaggaggagccgctcatccaggcggcggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgcttgcagtggcagcctcaaggtccagctcctcctcttttgatgttatttccatcttggatatggttcttatgttcctgaaattattgtaggcagcttgttgttcatgcagtgcatgtagttactggggctaagaataggctagttggggtagtgcttttcctagtttccattttggcttcattatggtttttcaattctattttcatgttggataagttgatggttttcttgcacataaattgatctaccatgttagataaagttgatttatcacattagattccctgataggttatactacctccatttcaggttataagactttctagtattgcctacattcatataaatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatatatatatatatatatatatatatatatatatatatatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtagttgtttaattgccttgtatatgtatgttcaggatagtatcactgccatatcatatgatggggataaaattgttcacccctatggcagcatagtttactgggatgctatctatctacctgtagaggatgctaacctttaaacatgctgtgtacaaaaaaattggtttatccaataactatgcagtatcgggcatggcatgtatgtacctttaagcatgctcgtgtgactgtgtcctcactttctcctgaatctagctgcaaatggcaagttggattgttctcatatactttttaatgaagaaccaacctttgatctcatagggaagtgatgtggatatggatattgcatatcatctgtttgtcacaatcccttgtggagaacactttgcaaagacaagttgagtcagcactccgttaaacaaagcagctatgaattccattttacaatctttatgggataagacataccagtgttttgtgcaatggtttttgaagcaatagttgggtcaccacattgctactttatggtatgatgctaccttggacactaaatttcaacagcaatacagtgcatgggccggtcttacgtcatattaattgccaatggcaatacgtaatgcaaacccacactcaagcaagcaaccaccaatagtaaggctgtgttcgggaggtggaattccacctccccgcaagaaaaacatggtggtttattaatgtttaattaattaagtattagctaaaaataacttgaaaaatggattaatatgatttttaaagcaacttccgtatataatttttttgtaaaaaatgtaccgtttattagtttgaaaagcatgcacgtggaaaatgagagaggtgagttgggaaagtgaagaaaagaactcagcctaaatatattggttttgagtttgatccaacaacgaaaaatgcatttttatctcttaatattctattgggagcatatcaagggctactcaaaccatctgtccccaactatctccatgacttatcacagtaatactttattgatctcttctgtaccgtctgctggtactgttaagtcttgagttatgtcttgttatttcatttcattacatttcttccatatttctgatagaagctcatgagatgattaaagatccttaataatcttataatccattaacccagtccattttgtgtgaaaaactggatattaaataagcaaatttatgagattcgttactactttatctgctttgtttcttttagcttggaatttgcttttaagtcatagctattctttggatataatgtgtgtttgacatgaacttagaggctgcttctgtgtagtcaactaacttataatgtgtgttgtccttggcttgtataccatatgagaaagtacttgtatgttttatctatgtaattattttgtattctggaattgacaattttactttcttcatgtacagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattacatgtgaaatctgtcatgaggtcagtaagatttcttctctactactccattactacgcattgctttctagttcttatctagaggctaagatagcacctattttgatatgtgtgcatccaaattgcagtatatttgtttcttcttaggacttcatttgtcaaatgttctgatctgaccttgacctgatgatttgacttgttctttctgcaatctcacgtcctcaccaatacaatattgctgttgcgatagctgaattcctctttaatgccatatgcacctttttcttgatgtgtgctgcttgctcttcttctttcacataggcctcactccatacaggatcatggcttttgtgtgacaaccttgaactcatttagtgttgtctatctgccattacaccgttaccatttgaagttgcttggggagcgagagctaaagcagctcatttttattttaatcaatattagttgatttgaagtaatctgagtgacggggacaggtcgtgataaattgggtagatttgagtttttccatgggtgcttagttgtggccttccaatttagtattagttcgatcttttcctttcctttcatgagcttaaaaccagcatttagttttaggagaatgtaggggagaccgggagagccctactatgctggtacattgcatgcttttgtgattgattaactgtttatgtttcaaatatgtttatactcgtagaatacctgtagcttctttcagtcttctgtagattttccaatgtgtttccgttcctgtgtattaatttcgttgaggcttgtattttcttctgcagcaatataagcatggatacacagctccacctcgtgttgaaccagacgataccatcatagatatcgggtaagttatttctgtacttattttgcttaaatttaccagtttgtccatttgattatattgtgttcaagtgcctttgaaatttgaaaatttagaacatttctaagtcaatactgttggcttgcagtggtgattgggcacgtgacccaagaattattgctgtagcggctgcacaacgtcgtcttcttgaaactgagtatgatgaatatgctggtactgatgctagtggtgctgcattctgccgttctgctgcacttatagtaagtactaaacaacaattcaaggtcctgttgtgcttaataagctaagctaattcatagattgctacttccagagtccagacaatttgtccagtcaccagtatagcctatcgccctatcgatctgttttataattgaagaaccatgcttagagataccttgcatttctctcatagttctgtttaatgaatggaagtataatatttttagttggtttacaaataggcaatcaagctagcctccttctctagtcaatcctttgtatgacttctctagccaaatggcttgtctcgaatttctggaattctcaagattgaacattctaaaatccttggtgcttttccagctaatggccttgttgctattgaggcatgctttgtctatctcagacaatgaaggagatgatgatgcttctaccatgttctcggttagtcttgtgttccttccccactttttttatcttattggttctttctgagctcaatgttgacttaaaaatctttttttacatgacttaaaatctattaatgttcttcaatgtccaacagctctttctacttcgagctgctggatttctgctgccatgctatatcatggcttggatattcagtattttgcatcgccggcgacaaagacaggtacttctaattctgtatggatctcattgattgtcaataaaatcattattgggctattcttatggaggaatgaaatgattggtggaccatctgatcctaactttgacacattaaccacttggttggtttaacgaatgggatgggttgttgtgtcactcttatcatgtttagcagaaaaacgaaaaatgacaccacctcaccagaatcacgtgatgatccctatccaacttgatgtagtattatggaatggaagttttaggccccgtttggtagggctccaaactccaaactccaactcctaactctaaactcccactccagtgagagctggctccagtgggagctccaaacactttttcactccagtgtttggctagtattcagctccagatctgaaaaaaaaatttaaaaaagaaaaaaacaaatgcccaaaccctaactgcccgtacgccgccggccaccggccgtgcgctgccgcgtgcgccgtccctgcgccgcgtccccccacgcgccatcggccgccgaccacctgccacgcgagccgtcgcccggcgctggccgcgcgccgccccgcgcacagtccctccatgagccgcctggcgctgcgtgcgccgtcgcccgtcgccggccgcctggcgctgcgtgtgccgtcgcccgtcgccggcagcgccatccgccacggccgcgcgcgctgcccccgtgcgtcgtccccccacgcgctgcccggcgccgcgcgcgctgtcgcccgccgctggccgcgcgccgccccgacgtgccgtcccccatgcccaccgccggtagcgccgtccgccgtggccgggcgccgtcacccgccgccggccgcacgctgttggccagccaccgccccgcgtgccgttcaccctgccatggcgactcgtgaggattacaggaaggggagagagaggtgagaggtggaggtgagattgggggtagttcagtggcatttctgtgtaaataagttaaaaaattaaagggtagtgggtcttttggggtggagtggagctgtggagcagcaaaaacccagctccacccccgtagttcattttgtaggagtagctctgctaactccgctcccaaaaatagaggatctagactgtttggcacagctcgactctaggtaagtttgttgggagctggagctgtgccaaacggggccttacttgccgtaattactctagtgggcattgcagtataactatcatcgatgcaacatctaaactctttcgtacttgtatttttggcaggaagcggctgcaattgctgcagcagaggtggcattcatcctgcaatcagcccaaggccatgcccttcagttcaccatcgctccagactcccccgccactccacagcatgagccacagcagcagcagccgcagccgcagccgcagcaatagctagttacttcagtagcgtctctcaactactgactcgcacatgcagaagaagaggatacctcagctagtggccgctttgttgtttcctgttgcaactggcccagggacgctaagaacctggcctcgccttgtgtggccgggtagaaaccttgtaaaacgccagagattcatttgttgcaagcgaccgcagcttaagccccgctacccttcgatttgtctctgtgtaactcaagcattgatttattgtaaatttgtcgtctgttggagtccatttttttagttcctttgccaagtgttttactgccatgtacagtattattacatgggagcttttatctttcaaagaattaatctgagtgagtgtgaaactgttaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0600700, RefSeq:Os11g0600700