Difference between revisions of "Os11g0615100"

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(Created page with "{{JaponicaGene| GeneName = Os11g0615100| Description = A49-like RNA polymerase I associated factor family protein| Version = NM_001074806.1 GI:115486260 GeneID:4350918| Le...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0615100|
 
GeneName = Os11g0615100|

Revision as of 21:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0615100

Description

A49-like RNA polymerase I associated factor family protein

Version

NM_001074806.1 GI:115486260 GeneID:4350918

Length

3419 bp

Definition

Oryza sativa Japonica Group Os11g0615100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25752417..25755835

Sequence Coding Region

25752471..25753061,25753565..25753684,25754227..25754532,25755133..25755570

Expression

GEO Profiles:Os11g0615100

Genome Context

<gbrowseImage1> name=NC_008404:25752417..25755835 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25752417..25755835 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaccaccagcccgccgcctcctcccccaagaggaagaagaagcactccaagaagccggaggacagcaatgccaccgtcgacgactccctcgccgccgccgcctccccctcccccaagaagaaggagaagcactccaagaagaagcgggaagccatcgatgccaccatggccgctgcctcccccaagaagaaggagaagaagcactccaagaagcaggaagacaccaatgtccccgagaagaagcgggaagtcgtccatgtcaccgtggacgcctccctcaccggcgccgccgccgcgggcgcagcccccgtcgtcgcctacttcccgaccggctacgaccccctggccgccggcggcggcaggaagggtagagaggccccccgcacgaggctgttccgccacacgaagcacccatcccgcatcgagctcgtggtcggcgccgccactggtggcggcggagggccggacttcgtcgggcggagctacgccggcgaggccgtgctgccgcagctcactggctacgcgctcggtgtcctcgacaaggcctccggcaccctcaaggtcgtccccatcgccgccaacaagaaactggcgcattcgcagcactctggggcagtaggggaggcagtatcatcagcaggagatgctgacttgaaggtacaggatattaccaaggcgtttggaacccagaaagacaaggccaaggatattaagtggcagtcattaaatgaacaaaggaatgatccttctgcttttatggaccttgaccttgggaatgctgataccagtgtgggtgctaatgaaagtcaagaaccaactgtacggaacattccaccttatgatcctgcagcagatacatcagaaagggcatatctttttgatgagattattccaaagagtataaggccgcaccttgtggatattataggacattttgagtcaggagaaatttcttcaaaaggctatgggagttttgtgtcaaatcgtgttaataaattacaggagcttcagggtgaagataaggagaggcttgcttggatactgtcctacatcacacatctcctatccctgctggcacggaacagctccatgtccaagcggcacagaaaggaaaaccaggctaccagtggaccagtgatcccacagtatgtatatcgtaagatggtgctaatgtttacggaaccaggatctagcgccttgtcaacagagaaacacgagcttctgatcaactacattctcgtactcacgctctacgctgatgacttcagatccgaccctaaggatatatgtgaagacctgaaaatgacccgccagatgattaaaccatattatgaccagctgggatgcaaatcttcgtcggccggtgcatttaaatcctctgtaatgacacttccagctcccctcaagttcccaaaagaagctacaaggagaaagcgacgaaggttctga</cdnaseq>

Protein Sequence

<aaseq>MADHQPAASSPKRKKKHSKKPEDSNATVDDSLAAAASPSPKKKE KHSKKKREAIDATMAAASPKKKEKKHSKKQEDTNVPEKKREVVHVTVDASLTGAAAAG AAPVVAYFPTGYDPLAAGGGRKGREAPRTRLFRHTKHPSRIELVVGAATGGGGGPDFV GRSYAGEAVLPQLTGYALGVLDKASGTLKVVPIAANKKLAHSQHSGAVGEAVSSAGDA DLKVQDITKAFGTQKDKAKDIKWQSLNEQRNDPSAFMDLDLGNADTSVGANESQEPTV RNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFESGEISSKGYGSFVSNRVNK LQELQGEDKERLAWILSYITHLLSLLARNSSMSKRHRKENQATSGPVIPQYVYRKMVL MFTEPGSSALSTEKHELLINYILVLTLYADDFRSDPKDICEDLKMTRQMIKPYYDQLG CKSSSAGAFKSSVMTLPAPLKFPKEATRRKRRRF</aaseq>

Gene Sequence

<dnaseqindica>55..645#1149..1268#1811..2116#2717..3154#acctcaagaaccctagacaattggcgacctcgaaaagccctagagccgtctccaatggcggaccaccagcccgccgcctcctcccccaagaggaagaagaagcactccaagaagccggaggacagcaatgccaccgtcgacgactccctcgccgccgccgcctccccctcccccaagaagaaggagaagcactccaagaagaagcgggaagccatcgatgccaccatggccgctgcctcccccaagaagaaggagaagaagcactccaagaagcaggaagacaccaatgtccccgagaagaagcgggaagtcgtccatgtcaccgtggacgcctccctcaccggcgccgccgccgcgggcgcagcccccgtcgtcgcctacttcccgaccggctacgaccccctggccgccggcggcggcaggaagggtagagaggccccccgcacgaggctgttccgccacacgaagcacccatcccgcatcgagctcgtggtcggcgccgccactggtggcggcggagggccggacttcgtcgggcggagctacgccggcgaggccgtgctgccgcagctcactggctacgcgctcggtgtcctcgacaaggcctccggcaccctcaaggtcgtccccatcgccgccaacaaggtgagcaccattccatttccacccaagctttgatccatctgataactgttgtcactaattggaacgaaatgggtgataggtcctgtcacagtatagtgttttaagcagtttttgttttgatgacatgctggctccaatgggcaagaaatgtgttagtgttgagtagaaattgttgttctacttgtgacattacatacagcggcgcaattgagtggcaattgaacaatggacttgagcactgtagctgtgaagctgctagctctttccttggtgttaccaattccaatgatgtggcataatgatatatattaagatagtttatgaagtttgagcacttgctaaggaaatatagatttgttggtttaccattgtgattaattaattatttgcatttcaaagtgaagaacctatgttgttcatacggcatgaggatatgtaattttgctctggatatttgtatttgctaacagattcttaggctagatccgcaccttgaagtgcagaaactggcgcattcgcagcactctggggcagtaggggaggcagtatcatcagcaggagatgctgacttgaaggtacaggatattaccaaggcgtttggaacccagaaagacaaggccaaggtatgtttatgccccgggtttactatctttctgtttcctatatttgataacgtggtgtataaagttgcatgcacggtgcagtttaaactcaaaagttgattaggtttgttatactttttaaagataatatgtttataggataaagggtctgggcacatttacagatcagaagattttgcaggcccagaaattcagatgatatacgacttctggtagattagttttgcacatctaaccatctagagaaattttgtttccccctttttttcatgtaataaaaggaatgattttatggatctgtacacaggtggtttaaaactaaaatctgttttttttttggaccgtggatgcttatactgttgcattttctacattacatacccatacttttttcatcaagagttgcttaacggatacatcacctcaatttcttcactttacacccatcttaagtgcataacgaagcagcagaccatgacatgattgtgcttgcttgtttggatacagtcatgagtttgattcatgctatatattccttgcaggatattaagtggcagtcattaaatgaacaaaggaatgatccttctgcttttatggaccttgaccttgggaatgctgataccagtgtgggtgctaatgaaagtcaagaaccaactgtacggaacattccaccttatgatcctgcagcagatacatcagaaagggcatatctttttgatgagattattccaaagagtataaggccgcaccttgtggatattataggacattttgagtcaggagaaatttcttcaaaaggctatgggagttttgtgtcaaatcgtgttaataaattacaggagcttcaggtaaatactgatggttttctttttatctggttctcctgaatctttgtttcatattgaattaccccatgcatatactaataatccacttctaggaaaatttaatgagaaatgctcctgacttttggtggttgtaggtgtgttaattgtaaactcttaagagttgctgatatagttttaggagacagtaatttattgtacactaatcaaaggaaaataagattactttatgttgtcaagcactcaagcatacagggaagtagctattaattgactcggatcttcctttagtcagtgcaaaaagaatttatttgctgaaatattgtagttgacagttacagagtttttgctgtgatgtgagcaaactgtttctacctagaattggatggcagacactcaattgcaatgatgccatgtagaacaatcctgatttgcatgttttcccctctttattaagatatttactcagattgctctcgagacaatggcagccatctgtttaacttatgtcatactgaactcaactaaaaactgtgtttgtagagttgtttcttttattccatatgctctaaatgcaatatgtgtatgttttatatgctttagggtgaagataaggagaggcttgcttggatactgtcctacatcacacatctcctatccctgctggcacggaacagctccatgtccaagcggcacagaaaggaaaaccaggctaccagtggaccagtgatcccacagtatgtatatcgtaagatggtgctaatgtttacggaaccaggatctagcgccttgtcaacagagaaacacgagcttctgatcaactacattctcgtactcacgctctacgctgatgacttcagatccgaccctaaggatatatgtgaagacctgaaaatgacccgccagatgattaaaccatattatgaccagctgggatgcaaatcttcgtcggccggtgcatttaaatcctctgtaatgacacttccagctcccctcaagttcccaaaagaagctacaaggagaaagcgacgaaggttctgatcatctcagaaggatctttagccttatctgaatgtgggtgtgataggaaaagattgttcgaagttgggcctgagtttatgcatgctcagcccagccttccgaattactgaaacatgtggaatatggcttttgccttgtttttgtttccccttgtcacctggagttgctgtcacaaaggcagaatattgtttatgtattgatgacattttttaaccctttttttttctcatcttgcctaccagaatttacattgaagatatctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0615100, RefSeq:Os11g0615100