Difference between revisions of "Os11g0681400"

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(Created page with "{{JaponicaGene| GeneName = Os11g0681400| Description = FAR1 domain containing protein| Version = NM_001074989.2 GI:297612383 GeneID:4351122| Length = 4404 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0681400|
 
GeneName = Os11g0681400|

Revision as of 21:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0681400

Description

FAR1 domain containing protein

Version

NM_001074989.2 GI:297612383 GeneID:4351122

Length

4404 bp

Definition

Oryza sativa Japonica Group Os11g0681400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29405768..29410171

Sequence Coding Region

29405768..29405775,29406741..29406959,29407490..29407496,29407584..29407646,29407719..29407790
,29407897..29409016,29409497..29410016,29410033..29410171

Expression

GEO Profiles:Os11g0681400

Genome Context

<gbrowseImage1> name=NC_008404:29405768..29410171 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29405768..29410171 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaccaatctatgttctgatgatgagcaagaagatcatatcatatcagatgaagatggctttgcaattgaggaggttgagagtgattcaaatgctctggtagcagataaaaccaaactgttggagccaaccaaagtgaggatagtgccacttgcttttacattaagttatgctcgaaagttaggattcggtgtgataaaaagaggatctaagaaaactgaggatggcaaggtgagatatttcacacttgcttgtagcagacaaggtaaggcacagtacacatcaacaaataaattcaagcctaacccctccacaaggcagcagtgcccagctaaagttaacttttatcttcatgatgagaaattctgcattagtacgcttactcttgaccataatcatgttgtaagtcctagcaaagcaagacatctcagatgtcacaagaaacttgatttgcaagctaagagaaggctagagttgaatgaccaagcaagaattcgtataaacaagaattttagttctctagttatgcaagctggaggctatgagaatcttcaatttggtgaaaaggagtgcagaaattatttgcaagatgtacgaaagcttaagcttggtgctggagatgcacatgcagtttatcagtatttcctgcgtatgacagatgattttgataagggatggatgaaaatgattgatgaatttagcttacaggataatgaatggcttgctgggttatatgataacagggaattatgggtgccggcttatgtgaaagacacattttgggctggaatgtcttcgtcgcaaaggagtgagagtgtgaatgccttctttgatggttatgttaatgctagaaccacacttaagcaatttgtggagcaatatgacaatgcactaagagacaaagtagagaaagaaaacaagtctgattgtaaatcattccaagaggcaattccttgcattactcactatgaatttgagaggcaatttcaggtggcatataccaacaagaagtttaaagagtttcaggatgagctaagaggcaaaatctactactatgcaactcttcggaagacagaagggttggttcatactttcagtgtcagagaggaccgaaaaattggagagcaaagggttgtttcagagttacttgttttgttcaaccaagaggattgtgacttgcattgtgaatgtcggcatttcgaattccgagggatcttgtgtagacatatcctttcaatactccctcttgttgatatagaaaaagtcccttccaaatatatactacaacgatggagaaaggatttcaagcgcaagcacacatttattaaatgctcctatgatgatcagcttgacacgccaattgttaggcgttttgatacgttgtgcaagcgttttaatgaagtggcagagaatggttcagtttcagatgcattgtgcaatttagtgatggatggcctaaatgaattgcaaataaagattgatgcacaccatggcagcaaggaaattcaggaatatcagcaaaatgggaagaataaagatatggtgctgaaacaaggaaaaatggtgctaagcccaatatcagttcgtagaagaggtcgtcctccttcactgagaaaacaatcaaaattggatcaagtggtaaggagattgagaatgaagaagcaacaagaatctacaattgaagtacaaagtcgaagaaggagaaagacaaggaccaaaaatgttatatcaaaagataaacagcttatcaatattcagaactctagacaaatggaggtaaattttgatcattgctatggtggagcatatgaggcaggcagtgcagagtttgctgcaaatgagtttcagggactccaatcaaatcacccggcaccaccatctcacattagttcttacatggatcttcttcagggaaatgtcgtacaagcgtcggacacatgcgtcggacgtatagcaaagttgattgaaaatctaatgggtctcacaacttccaagtctgccaccggcgacggcggcaaaaccacgtcgtcgtcggccatcgacagcaagagagcaatggaaaccgggtcagtcaccatccaggtcgccggctacagtagaaccaaagggatcggcgtcggcaagagcatcaactcctatgtttag</cdnaseq>

Protein Sequence

<aaseq>MDTNLCSDDEQEDHIISDEDGFAIEEVESDSNALVADKTKLLEP TKVRIVPLAFTLSYARKLGFGVIKRGSKKTEDGKVRYFTLACSRQGKAQYTSTNKFKP NPSTRQQCPAKVNFYLHDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLEL NDQARIRINKNFSSLVMQAGGYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLR MTDDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNA FFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPCITHYEFERQFQVAY TNKKFKEFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRVVSELLVLFNQEDC DLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIKCSYDDQ LDTPIVRRFDTLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHGSKEIQEYQQ NGKNKDMVLKQGKMVLSPISVRRRGRPPSLRKQSKLDQVVRRLRMKKQQESTIEVQSR RRRKTRTKNVISKDKQLINIQNSRQMEVNFDHCYGGAYEAGSAEFAANEFQGLQSNHP APPSHISSYMDLLQGNVVQASDTCVGRIAKLIENLMGLTTSKSATGDGGKTTSSSAID SKRAMETGSVTIQVAGYSRTKGIGVGKSINSYV</aaseq>

Gene Sequence

<dnaseqindica>4397..4404#3213..3431#2676..2682#2526..2588#2382..2453#1156..2275#156..675#1..139#atggacaccaatctatgttctgatgatgagcaagaagatcatatcatatcagatgaagatggctttgcaattgaggaggttgagagtgattcaaatgctctggtagcagataaaaccaaactgttggagccaaccaaaggtatgctatttgatagtgaggatagtgccacttgcttttacattaagttatgctcgaaagttaggattcggtgtgataaaaagaggatctaagaaaactgaggatggcaaggtgagatatttcacacttgcttgtagcagacaaggtaaggcacagtacacatcaacaaataaattcaagcctaacccctccacaaggcagcagtgcccagctaaagttaacttttatcttcatgatgagaaattctgcattagtacgcttactcttgaccataatcatgttgtaagtcctagcaaagcaagacatctcagatgtcacaagaaacttgatttgcaagctaagagaaggctagagttgaatgaccaagcaagaattcgtataaacaagaattttagttctctagttatgcaagctggaggctatgagaatcttcaatttggtgaaaaggagtgcagaaattatttgcaagatgtacgaaagcttaagcttggtgctggagatgcacatgcagtttatcagtatttcctgcgtatgacgtccaaagatccaaactttttctatgtcatggacgtggatgaggactctcgactaaaaaatgttttatgggtggatgcaagaagtagggctacctatgaatctttttcagatgttgtgacatttgacactacgtacttgactaacaagtaccatatgccatttgctccttttgtcggtgtaaatcatcacggggaatcagttctattaggatgtgctctgctatcaaatgaagaaactgagacttttgtttggttattcagatcatggttatcatgtatgtcaaataaagcaccaaacgccataattaccgatcagtgcagagcaatgcaaaatgctattatggaagtatttcctgaagctcgacacagatggtgtttgtggcatatcatgaagaagattcctgaaaaacttggtgggtacttagaatatgaagttattagctctacattgtctaatgtggtgtatgattcattaaacagagatgattttgataagggatggatgaaaatgattgatgaatttagcttacaggataatgaatggcttgctgggttatatgataacagggaattatgggtgccggcttatgtgaaagacacattttgggctggaatgtcttcgtcgcaaaggagtgagagtgtgaatgccttctttgatggttatgttaatgctagaaccacacttaagcaatttgtggagcaatatgacaatgcactaagagacaaagtagagaaagaaaacaagtctgattgtaaatcattccaagaggcaattccttgcattactcactatgaatttgagaggcaatttcaggtggcatataccaacaagaagtttaaagagtttcaggatgagctaagaggcaaaatctactactatgcaactcttcggaagacagaagggttggttcatactttcagtgtcagagaggaccgaaaaattggagagcaaagggttgtttcagagttacttgttttgttcaaccaagaggattgtgacttgcattgtgaatgtcggcatttcgaattccgagggatcttgtgtagacatatcctttcaatactccctcttgttgatatagaaaaagtcccttccaaatatatactacaacgatggagaaaggatttcaagcgcaagcacacatttattaaatgctcctatgatgatcagcttgacacgccaattgttaggcgttttgatacgttgtgcaagcgttttaatgaagtggcagagaatggttcagtttcagatgcattgtgcaatttagtgatggatggcctaaatgaattgcaaataaagattgatgcacaccatggcagcaaggaaattcaggaatatcagcaaaatgggaagaataaagatatggtgctgaaacaaggaaaaatggtgctaagcccaatatcagttcgtagaagaggtcgtcctccttcactgagaaaacaatcaaaattggatcaagtggtaaggagattgagaatgaagaagcaacaagaatctacaattgaagtacaaagtcgaagaaggagaaagacaaggaccaaaaatgttatatcaaaagataaacagcttatcaatattcagaactctagacaaatggaggtaatatatttattaaaatgtgtacagcatattctattcagtagtattaagtacttgaaatatttcatctctctatcgtttctgaatatatgcacttcattattaggtaaattttgatcattgctatggtggagcatatgaggcaggcagtgcagagtttgctgcaaatgagtttcaggtaatttgtgtgactgatttgccatacataattttgcattgctgtaattgatttgacaatattgttgtacagggactccaatcaaatcacccggcaccaccatctcacattagttcttacatggatcttcttcaggtgctaattttcattgttgccttctagtatatatcagtgcatagtactttcccctaacttgttgctctgttccttttacttttgcagggaaatggtgatttgacggagcttctatcccagcatatgaatggatgaaagagagaatgattttttgcttgcattacttgtgatctcaatcgacgaactaaacaacatttgctagtttattattattcaatgttagacagtatgcttgtgattttggatgtcactctacctgtattttgaatgtcactctacctgtattctgtttaatgaactgattttggccatgaatatggaaattgaagccgtggtgcgttgcttttcacaggtctggtcaatcattttttacttgtatgttatggctttttttagaggacttgcatgttatggctgtgagaatatattggtttcacatcctaaaggtctaaactaatctaacatctggagtgaatcattttaatagcaacctaagctgatacatgttctcagccagactggccccagtgtacagaaagcccagtacgcaagcaaacaacaacgaggcccagcgacccgtagtcatatctgacgccgtcattgctcgtttttccactgtttcagtcgtacaagcgtcggacacatgcgtcggacgtatagcaaagttgattgaaaatctaatgggtctcacaacttccaagtctgccaccggcgacggcggcaaaaccacgtcgtcgtcggccatcgacagcaagagagcaatggaaaccgggtcagtcaccatccaggtcgccggctacagtagaaccaaagggatcggcgtcggcaagagcatcaactcctgtaagttccacgacggaggggtgacacctggacacctggtatatatatacgtcgcctactacccgacggcgatcgccgggagttcgccgactgggtatctgtcttcctctacctcgaccggccgacgccgccgacgtcgtcaccgcagaatacgtgttcagtatacccgacgggagcggccacatggtccgcatgaaaattcccccatcgtcgccggtgacctttctcctttaattgtccatggctacaaataacgttagggctatggtatcaggtgtgacatcgccgtggttactgagtgccctccaccgccgtcgcgaggcggcgtcatcgtcgtccgtggtggtgccaccaccggacttgcaccggcatctccgcgacctcctcgccagcggacgtgctcgccgcacgatcgtcgatttttatggcggagctcttcggtggccgtgaggaggaggatacttacattcagattgatgactcgagggaccatcagtgtactgtgaaggggcaatgaatggctggggagcaccaatgtatgaagaggatattgttgaatagttcaaaattagttatggaagggtaaggaatttaatatatgagtgtaagagcatctcaactaatggaatcgtttttgggcaggaaagagtctttacaatctaaaaaagttcataacaggagggtagaatgcagattcttgattgctcacagcagtatttgacttgcagactcaaatgagttgtagtcaatgggggaaaaaacatacttgttcatataacggtacagtctcgatgatcagttttataaggacagagttgtcccaacttgaagtgccatcgccaactcgaattctttagcaaaccaattgtcaaacatcaatttacaattggcatgttgccttgtgaatgggaagttgcaatttttaaatgttcatgtcactagtagtcatttatttttctgtccagatgtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0681400, RefSeq:Os11g0681400