Difference between revisions of "Os12g0102700"

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(Created page with "{{JaponicaGene| GeneName = Os12g0102700| Description = Conserved hypothetical protein| Version = NM_001071772.1 GI:115486865 GeneID:4351247| Length = 5138 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0102700|
 
GeneName = Os12g0102700|

Revision as of 21:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0102700

Description

Conserved hypothetical protein

Version

NM_001071772.1 GI:115486865 GeneID:4351247

Length

5138 bp

Definition

Oryza sativa Japonica Group Os12g0102700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:127352..132489

Sequence Coding Region

127617..127691,127920..128000,128284..128395,128486..129705,130136..130309
,130566..130669,130790..130934,131080..131148,131238..131494
,131561..131728,131850..131889

Expression

GEO Profiles:Os12g0102700

Genome Context

<gbrowseImage1> name=NC_008405:127352..132489 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:127352..132489 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgccgtgccgcatccctgcagccaccggttccggcaacaaagagaacaatatctcccaaaatcgacgccatgtcttggattgccaaaccccgtgcgaaggcaaaggcgtggctacctctaaaaagaggaagaacaagcctgcaggggggttcaatctcagaaaaagcatcgcatggaatcctgctttcttcactgaacaaggcgttttggataacacggagctttctatgcttactggctcccaagtgaaggcaactaggagccctgcctctggattttcttctaccttttccccattgtctaggtttggaaaatctagcaatacatctgtgctcaaggaaatcggagagaattctcgtggaaaatttccttcaaaatgtttgagtgcagaaaacaagggaaggaagttgtttgcttcctcaaaagcttctgagcaggatgaacgaaaagcacttgcgggcacacaggataaaaggtcagcaaaagccatccaaaagtccattccacgaccacctgcaggatataaaccgaaaaaagtgccaaactcaagtggtatagctcaaatacaaaggataccaaagaagtctgaaccttctccttctgtggtctctagaagtagaagtacctcatctgtgacaaatgttcccaaaccaacaacaaggccagctacagttacaagtgagtgtacacataaagtagaggggctcccgcttaaatcgaagactgagcgttcatctgtcactaaatcttctggacctaccatagggaaggacatggtgccgcctactgttactaccatctgtcaagaaaccaatggttctgggaaatgtgaaactttttcaccatattcacaagataacccctccagttctgttgtcgcccctgcacgaatatctgctaagccatctgctctccggatgccttcaccttcagttggctttttcactcagggaaaagcttctgtatcacatagtggtactgctcaaagaaatccagagaggtgctttagtggaaatatttcatcagtaaaaccccccaggtataagcagcctgtggatccaaaaagcagattccatctaacaaagcagctgccaaccaatttctctgctgcttccagtcttcctgtgcaacctgccactagtgacagcactcccaacgtcttggcctcttctctacctggtgttgaggatgcgacagtttgttcactgaagcaatccttatcggaaagtactgtaccatattcagaaaaatcagggaatataagttatcaagaaatgccagatgatgatttttcgttggctggaaatggagctaccacagagttgagttttagagataatgatgatggcagaaatagcatgcccaatgagtgcagtgttgcgctgtctgtcggacaggatcttaatgctatttgctgctcaagcactgagcctgctgaggattcttgctttcttaaagtcatttgctcgtcaagcgaaccttccgtggggagtaacttgacaacatcttgcatttcttctccagggtgcaccccaaatgatctcaattctcaaagcaagtctgacaatggtgaaacagcagttgacatagaaaattcactctctggagagacatctggtacagtttgttcatcagaaggcaacaattgcacttcagctacagattccttgcaaaaatccgattcctgccatcagcagaatatgctagttcagtctatacattgtacagatcaaataccacagtttgatagttcaacaggcataaaaccatctttagcatacagccagttagactccaacaattctttgtgtagtgaagttcagcttacttcatcagaaggaccagatattgatagtgaaatggagcttgatacagatgattcattcactgtggaggaacctcccctgttacatgtaggggatgaatgtgaccatgattacaggagtgcagaatgttcacatatgaacctggcagcgccttcaccttgtgtagatcaagaggcactagctggcaatttgacagaaaaagtagatacagctgacggtagaacagaatcacatcactgttcgacccaggaaagacgacctattttatcagaagaacaagatactgaagacaaaattgggtttgacaccaagttgtcgtcttcagagggtgcatcaagtatagagaggattaagtcagtgggtaaatcaagaacaaataccataagtaaagatcatctaaaaaacttggtaccgtttacagaagaatggcttgctgtcatggaagcttttggagaggaagttttggaacagaagacgggcgctgtgcaaaattctcctaccgataaagctgctccagaacctagtccatggtcaccggttaaacggaaagctcaagatgttgggccattcgactgtaccaagtattccaagaacgtcagaacaagtgactga</cdnaseq>

Protein Sequence

<aaseq>MASPCRIPAATGSGNKENNISQNRRHVLDCQTPCEGKGVATSKK RKNKPAGGFNLRKSIAWNPAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPL SRFGKSSNTSVLKEIGENSRGKFPSKCLSAENKGRKLFASSKASEQDERKALAGTQDK RSAKAIQKSIPRPPAGYKPKKVPNSSGIAQIQRIPKKSEPSPSVVSRSRSTSSVTNVP KPTTRPATVTSECTHKVEGLPLKSKTERSSVTKSSGPTIGKDMVPPTVTTICQETNGS GKCETFSPYSQDNPSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSGTAQRNP ERCFSGNISSVKPPRYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATSDSTPNVLAS SLPGVEDATVCSLKQSLSESTVPYSEKSGNISYQEMPDDDFSLAGNGATTELSFRDND DGRNSMPNECSVALSVGQDLNAICCSSTEPAEDSCFLKVICSSSEPSVGSNLTTSCIS SPGCTPNDLNSQSKSDNGETAVDIENSLSGETSGTVCSSEGNNCTSATDSLQKSDSCH QQNMLVQSIHCTDQIPQFDSSTGIKPSLAYSQLDSNNSLCSEVQLTSSEGPDIDSEME LDTDDSFTVEEPPLLHVGDECDHDYRSAECSHMNLAAPSPCVDQEALAGNLTEKVDTA DGRTESHHCSTQERRPILSEEQDTEDKIGFDTKLSSSEGASSIERIKSVGKSRTNTIS KDHLKNLVPFTEEWLAVMEAFGEEVLEQKTGAVQNSPTDKAAPEPSPWSPVKRKAQDV GPFDCTKYSKNVRTSD</aaseq>

Gene Sequence

<dnaseqindica>4799..4873#4490..4570#4095..4206#2785..4004#2181..2354#1821..1924#1556..1700#1342..1410#996..1252#762..929#601..640#aaaattcaacttcaattccccatccaactcaaccgcatcgccggctcgccgccgccgccgccgccgctcgccgacggtgtcgtcctcgactcctccgccacccacctgctccatctcctcgtcttcctcttgccacattctcctcttcctctcctcgcagcttccttccctgcctcctccgctacaagccagatccatctccgctcaccaccgccctcgtccacgactccgtgggtaagcactacggccatcttctccgctacatcaggcgccttcaacatgcctatttccccctttctatctttttcttttttatttatatatataattgccccctttctatctagtggagtatcttcttgtgatttagattgataaacacaatatgtttgctcttgtttgagaaaggcaaagtttgcacttcacgtggacaccaaacatgtaaagaaaaaatggcagttcaaaccgattcctcttgactcaattcaactataaattgaaatcgaatccatttcttgtgataccaggtatccaaaaaggacaaacaaaaagtaaatttcttcttctcactggcacgctcagtcgtgaatccacatgtaaatggcctcgccgtgccgcatccctgcagccaccggttccggtgagctccccccccccccccaaccccctctttgcatttgcacctactagggtttgccctggactttgactttccaggtatccaataagctttacttctctaataatatcttcatggacaggcaacaaagagaacaatatctcccaaaatcgacgccatgtcttggattgccaaaccccgtgcgaaggcaaaggcgtggctacctctaaaaagaggaagaacaagcctgcaggggggttcaatctcagaaaaagcatcgcatggaatcctgctttcttcactgaacaaggtacaagatttctttcacagctactaaatgcttccggcaactgaaaaacctctatgcttctggcaggcgttttggataacacggagctttctatgcttactggctcccaagtgaaggcaactaggagccctgcctctggattttcttctaccttttccccattgtctaggtttggaaaatctagcaatacatctgtgctcaaggaaatcggagagaattctcgtggaaaatttccttcaaaatgtttgagtgcagaaaacaagggaaggaagttgtttgcttcctcaaaagcttctgagcaggatgaacgaaaagcacttgcggtcagttcatcacatagcattttgcttacttatggtaatgctattattaaagctcatgcaatttctcgttttcttctggacaattgcagggcacacaggataaaaggtcagcaaaagccatccaaaagtccattccacgaccacctgcaggatataaatatccttatggagattttgggattattggatgtcttgttttttttttcttaacagactcatgccaattgtctggttaatactcttttcataagtttcactcttattaattacacgtgctattgttagtcttaacataattatacaccgaaaaaagtgccaaactcaagtggtatagctcaaatacaaaggataccaaagaagtctgaaccttctccttctgtggtctctagaagtagaagtacctcatctgtgacaaatgttcccaaaccaacaacaaggccagctacaggtaatcttgctcatagtcctcactcctcaactctaccaatgaaatcttcctgacatataacttaggtttcagcacttttgcatgtcactatcactaattcagcacgccactatttttcagttacaagtgagtgtacacataaagtagaggggctcccgcttaaatcgaagactgagcgttcatctgtcactaaatcttctggacctaccatagggaaggacatggtgagtgatagcgtcaattacatttaatcgaggggaaactcttagtacacctctgttatttgaagcactgccactttgttggataccactcaagatctcaaatcttgcccctatatatgatactgaaaacatcgtaaccttaaaactactttatggttgttacatgcttatttacttcaaaggatgtagcggtgaatttgaaaacattgtaaccttaaaactacaaaggatgttacatgcttatttacttctacaggtgccgcctactgttactaccatctgtcaagaaaccaatggttctgggaaatgtgaaactttttcaccatattcacaagataacccctccagttctgttgtcgcccctgcacgaatatctgctaagccatctgctctccggatgccttcaccttcagttggctttttcactcaggtaatctattatgctctttcatacatattcactaatgttgcttcttgttttctcagtgatatgaaaataacgtgatatttttacagctactttgatgtatcaatatatttctcttacactttaagtgtttacttgcatctaaccagacgttacaaattagttacctgaaagcgcattaaaaaaatagcggtgaatgatttgtgtgtaataattgcatttgtgggttactggatgatgaggtggtgtgaaaattgtttgaaacaagagatgggcatcctacaaaatgtatgtctgagttggtacaaaattttattctcattcttggagaaattttactttggccatcctacaaagtgtatgcctatgttttatgagattttttttttttttgtgaaaatctccatacctcatttttgactaattatttcagggaaaagcttctgtatcacatagtggtactgctcaaagaaatccagagaggtgctttagtggaaatatttcatcagtaaaaccccccaggtataagcagcctgtggatccaaaaagcagattccatctaacaaagcagctgccaaccaatttctctgctgcttccagtcttcctgtgcaacctgccactagtgacagcactcccaacgtcttggcctcttctctacctggtgttgaggatgcgacagtttgttcactgaagcaatccttatcggaaagtactgtaccatattcagaaaaatcagggaatataagttatcaagaaatgccagatgatgatttttcgttggctggaaatggagctaccacagagttgagttttagagataatgatgatggcagaaatagcatgcccaatgagtgcagtgttgcgctgtctgtcggacaggatcttaatgctatttgctgctcaagcactgagcctgctgaggattcttgctttcttaaagtcatttgctcgtcaagcgaaccttccgtggggagtaacttgacaacatcttgcatttcttctccagggtgcaccccaaatgatctcaattctcaaagcaagtctgacaatggtgaaacagcagttgacatagaaaattcactctctggagagacatctggtacagtttgttcatcagaaggcaacaattgcacttcagctacagattccttgcaaaaatccgattcctgccatcagcagaatatgctagttcagtctatacattgtacagatcaaataccacagtttgatagttcaacaggcataaaaccatctttagcatacagccagttagactccaacaattctttgtgtagtgaagttcagcttacttcatcagaaggaccagatattgatagtgaaatggagcttgatacagatgattcattcactgtggaggaacctcccctgttacatgtaggggatgaatgtgaccatgattacaggagtgcagaatgttcacatatgaacctggcagcgccttcaccttgtgtagatcaagaggcactagctggcaatttgacagaaaaagtagatacagctgacggtagaacagaatcacatcactgttcgacccaggaaagacgacctattttatcagaagaacaagatactgaagacaaaattgggtttgacaccaagttgtcgtcttcagagggtgcatcaagtatagagtatgtctgcatcgaatatttgaatgtacaaagttagtcatctacaattatatattgcattgatagcgtgtcattcttatatttctgcaggaggattaagtcagtgggtaaatcaagaacaaataccataagtaaagatcatctaaaaaacttggtaccgtttacagaagaatggcttgctgtcatggaagcttttggagaggtcagtttacttgcatcatggacattttgagcttgtcaggttgtcatttacatgagtaggttgtcgtgtgtcttacacaactgcttgtttttgttctatttgtatgggcccagtccagtgttcttaggagaggttgagctcggtttatgccccgaaataaattttatgatatgcaacatgaattgccaccctaatcggctaacctgaagtttacctcgccgtacaagtttgattgagtcttctgctgtgaggcttatacctgagtttacgtatgttttgacaggaagttttggaacagaagacgggcgctgtgcaaaattctcctaccgataaagctgctccagaacctagtccatggtcaccggtatgcctttctgaaatttagaagtatgggatgaaatttcttcaaacatatgtagagcgtttgccttattgtttcagtcagtcagtgtatgcattacatgtagatgtagtaaacgaagatgcatcgctggttctttttgcgtaggatcacttcttgccattgctggtaacaaaagtgaagttaagtaggttgattgatgaagagccattccttgtgatggtcctgcaggttaaacggaaagctcaagatgttgggccattcgactgtaccaagtattccaagaacgtcagaacaagtgactgatgataccccttgacagcaatcaaatcgttggccttggacttgtcttgaggtcacagcacaacacgaagccttgcttgcaacaagttggtcctgttgttccatgtaattggctaaccttgtacatgagacattcacaagccttgccactgcgcttacttgcgctcattttgttatcatttggttgccaaatttgtagaacattgtacggaccacgtcccaggcaaacgcttggctaacaaatcaataaaggaaaatctcttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0102700, RefSeq:Os12g0102700