Difference between revisions of "Os12g0104400"

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(Created page with "{{JaponicaGene| GeneName = Os12g0104400| Description = Fatty acid acyl-CoA desaturase family protein| Version = NM_001072458.1 GI:115486877 GeneID:4351253| Length = 3946 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0104400|
 
GeneName = Os12g0104400|

Revision as of 21:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0104400

Description

Fatty acid acyl-CoA desaturase family protein

Version

NM_001072458.1 GI:115486877 GeneID:4351253

Length

3946 bp

Definition

Oryza sativa Japonica Group Os12g0104400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:225239..229184

Sequence Coding Region

225670..225870,225989..226126,226315..226392,226523..226708,226853..226945
,227797..227863,228458..228547,228660..228964

Expression

GEO Profiles:Os12g0104400

Genome Context

<gbrowseImage1> name=NC_008405:225239..229184 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:225239..229184 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtcggcgacccaggaggcggactgcaaggcttccgaggacgcccgtctcttcttcgacgccgccaagcccccgcccttccgcatcggcgacgtccgcgccgccatccccgcccactgctggcgcaagacccccctccgctccctctcctacgtcgcccgcgacctcctcatcgtcgccgccctcttcgccgcagccgccactcggattgacgtctccgtcgcctgggcggcctggccgctctactgggcggcgcagggcaccatgttctgggcgctcttcgtcctcggccacgactgtgggcacgggagcttctccgacagcgccatgctcaacaacgtcgtcggccacctcctgcactccttcatcctcgtcccctaccatggatggagaatcagccacagaacacaccatcagaaccacggtcatatcgagaaggacgagtcctggcacccgatcaccgagaaattgtaccggaagctggagacgcgcaccaagaaactgcgctttacattaccatttccattgcttgccttccctgtctacctctggtacagaagtccgggcaagaccggatctcactttctgccgagcagcgatctgttcagccccaaggagaagagtgacgtgattgtctccaccacctgctggtgcatcatgatttcgttgctcgtcgccttggcgtgcgtgtttgggtctgttccggtgctcatgctatacggtgtcccatatcttgtattcgtgatgtggcttgatttggtgacttatctgcaccaccacggtcacaatgaccttccctggtatcgtggagaggaatggagctacctccgcggtggcctgacaacggtggatcgggactacgggtggatcaacaacatccaccatgacattggcacccatgtcatccaccaccttttcccccaaattcctcattatcacctcgtagaagcaacaaaggcagcaaggccagtgctgggcagatactacagggagccagagaagtcaggtccgctgccacttcacctgtttggcgttctgctgaggagcttgagagttgatcactttgtcagcgacgtcggggatgttgtttactaccaaacagatcacagcttgaacggcactgactgggccgaagatgctaagcacaagtga</cdnaseq>

Protein Sequence

<aaseq>MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWR KTPLRSLSYVARDLLIVAALFAAAATRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDC GHGSFSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLY RKLETRTKKLRFTLPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTC WCIMISLLVALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWS YLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREP EKSGPLPLHLFGVLLRSLRVDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK</aaseq>

Gene Sequence

<dnaseqindica>3315..3515#3059..3196#2793..2870#2477..2662#2240..2332#1322..1388#638..727#221..525#gaaggcaacacaggaggaggaggagcttggtttctgggttgggttgggtttggttgcgttgcggcccatccatcgcattcgcgttcgcaggcacaaaccaaacacctcccctcaaatttctctttcttgtctcttctccctttccgcctcgcctcgcctcgctgcctgcgcttcacaaatcacaaatcggaatcagatccaccacgacacggcggcggcaatggcggcgtcggcgacccaggaggcggactgcaaggcttccgaggacgcccgtctcttcttcgacgccgccaagcccccgcccttccgcatcggcgacgtccgcgccgccatccccgcccactgctggcgcaagacccccctccgctccctctcctacgtcgcccgcgacctcctcatcgtcgccgccctcttcgccgcagccgccactcggattgacgtctccgtcgcctgggcggcctggccgctctactgggcggcgcagggcaccatgttctgggcgctcttcgtcctcggccacgactggtaatttctattcattcattcatcgcttccatttcttttctcatatatgcatatatgcatcaatccatcgagatctccatgaaaaacaaattgaaaatgcatgcaaacacagtgggcacgggagcttctccgacagcgccatgctcaacaacgtcgtcggccacctcctgcactccttcatcctcgtcccctaccatggatggtaccaactcctcctatactctctctctctctctctctctctctatagcatacatgcatgtatatcaattttcaaaatcacacgagttgcatgcacaaacagaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttcacctacctacttctattgcacacctaccaaattaatgctctgaaaccagttaattagttagaaactaaaaagtttttgctttaccacacgcgcggcacacggcaaaagcatagatgcaggcaaagcaagttgaaaaaacagcacatattcgggtctccatcctatatacgtggaactagcctgtcctgtcaaatccagaatctcttcacatgatactgtatgtgcaattaggcaatgctagtcttggtttaccatagcatcttggaccatcactgctatggtaattcatctcgttgacccatccgatctgagcatctgactgatattattaatgtcatatgcaggagaatcagccacagaacacaccatcagaaccacggtcatatcgagaaggacgagtcctggcacccggtttgtcactccttcagatcacctcctctcttactaatttcttctcatctctcgcccatcctacaattgcttgcacttctcaacttcattccactcctagtactatccttaattatgcttgtctcaatccatcgcccgtacaacaattacaacccttttgaaaaagatacaccaattacatttgcttaattcgcggtactactactatcatatatagtaccaaaactgtatatatgactttcgcaaatatactccgtattcttcgctagcgtgtccaactggggcgtttggcaggacgggaaaggacaggacagccaaacgaacagtaagtattatgcgacatgctcacctgcaattgcattaataataatgcagatggagagaagggcacatgaccactgcagcagaccacaacgatccaccctgcttgttgcaaaatatcagccttcctttgtggtccgtgaatagtaataccaacaagattgagacagtagatctggctcacgtgcctttgctgctaaattattcaccagggatcccagatgcgaatcggatcactttttgatccgtagctcagcgtcagatcgaatatcatattacacatcacgtgatttgattcataacatatatatatatatatatatatgctaattaagttgtaggttcatttgaataaggccgccagggtagcataagcatctgctcagctttattgactgaataagaaaataacgagaggctgaatgagttttttgcttgtcacctgtatataagctggctctcaacatatagatacgtactctataatctgcttaaatttttatatatgcttttgcaatttgtttgagcagatcaccgagaaattgtaccggaagctggagacgcgcaccaagaaactgcgctttacattaccatttccattgcttgccttccctgtctacctcgtaagtctctgaatgtcctcctcacccggcaactccacgcaattgtgctgaatgaatgactcaactgaaaccgaactgaatctgtatccccaaaagaaagaaagacaactgaatcttctatacggatgcttgaatgtgctgcagtggtacagaagtccgggcaagaccggatctcactttctgccgagcagcgatctgttcagccccaaggagaagagtgacgtgattgtctccaccacctgctggtgcatcatgatttcgttgctcgtcgccttggcgtgcgtgtttgggtctgttccggtgctcatgctatacggtgtcccatatcttgtaagatacactattcactattaatcctctgcttttgcttctaagaaactccatcatatttatgggatatctaactgaaactgtacccaaaagctagatatctgatatgcgttgtctgcattcaaaacaggtattcgtgatgtggcttgatttggtgacttatctgcaccaccacggtcacaatgaccttccctggtatcgtggagaggtatatcttttttctgtattgattggatcatagtttttccagaataaagcatgaaaagttgctgtaggttattgagttgggtgcagcctatgagcactctatacttcctctcactctatacttcattaagttctgcttacaaacactgaaaatagggctgaacatctggcaatgaccactatttgcaggaatggagctacctccgcggtggcctgacaacggtggatcgggactacgggtggatcaacaacatccaccatgacattggcacccatgtcatccaccaccttttcccccaaattcctcattatcacctcgtagaagcagtaagtacactgccagcattattcacctctgctagatagtatgtatgtacggtgcactgttaccaagttcactgagtactgaaacaattgccttgttttgatgggaacaaaaaaacagacaaaggcagcaaggccagtgctgggcagatactacagggagccagagaagtcaggtccgctgccacttcacctgtttggcgttctgctgaggagcttgagagttgatcactttgtcagcgacgtcggggatgttgtttactaccaaacagatcacagcttgaacggcactgactgggccgaagatgctaagcacaagtgaaaaattaacttgaaaattattggagtcaccgtgtactagtagcttagtaagtgaagaatggattgttttcctgatagatagcatatccatcatagcatgaactgctgaaagaaagagaaataataagcagcaagggctacttacctgctcaaaagcatgcggccctgcagaacacagggattcattgatctgttggatcaccatattcagatcactaaacaagcattgtccaattgttgttgtagctagcgggtcgttcagttttgattagttctgaaagtgtccaagttataccgtgtaaccctttggagtttgccaggcaattcaatgtctggagtttgtatgtgccattgagcagacaattatgatccgaattaagctctgcaccttaatttttccatactgaatcactcacaatggagtttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0104400, RefSeq:Os12g0104400