Difference between revisions of "Os12g0112300"

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(Created page with "{{JaponicaGene| GeneName = Os12g0112300| Description = Conserved hypothetical protein| Version = NM_001072505.1 GI:115486971 GeneID:4351303| Length = 5577 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0112300|
 
GeneName = Os12g0112300|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0112300

Description

Conserved hypothetical protein

Version

NM_001072505.1 GI:115486971 GeneID:4351303

Length

5577 bp

Definition

Oryza sativa Japonica Group Os12g0112300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:631454..637030

Sequence Coding Region

631489..631605,631700..631864,632636..632734,632941..633027,633114..633182
,633274..633370,633456..633558,633869..634085,634215..634328
,635021..635152,635446..635526,636284..636400,636497..636598

Expression

GEO Profiles:Os12g0112300

Genome Context

<gbrowseImage1> name=NC_008405:631454..637030 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:631454..637030 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgacgacgacgactcggcaccgcctccgggatgcggcggtggcgtcagtggtggccgtcctcccccacgagatctccccgctcatcagcgccgcctccaccttcttcttcatcctcagcgcctactttgccgtgctgccgctgcgggacgagggggccatctccctgggcctctcctccctcccgggtctcttcgccggctccctcctcctcacccttgtcgccgcccccgtcgcctccctcgccttctccctcccatccatccccaaacccagggctttggttttcatacacagattcttcagtttatcccttcttgtcttttttgttctttggtttgcctctacccctgggcattccccttctatctcccagtcaagcgaagatgcttcaaataaacctcctggatggggaaaccacagttggttctacatattagtgagaataagcttgtttctttgggtttccttgcttaatctcattgcaatatcatcaacatgggcaagagtaattgatatcatggatagtgagtcaggttcaagattgtttggttttattggggccggtgctacgctcgggcaactttttggttcattatttgctgcaactatggcattgctagggccctttctgctcctgttttcatccctattgatggaacttgctgcattgtcatcgaaaggaatctgcactgatgatactcacggctcaatggaattgtcttctacaatagccgaacaaagccaaaatacagaggctgatgatgaaatgtcttcactggtcacttcacaaggattaccgtcccaagtctccgaatctcagaaaaccaaacctgagatttttgtgatgtttgaaggtttctggctgattgcacgctctccctatctgatgtatatatctctatttttgtggctgagcgctgttgtgtcgtccttcttttacttccagaaagtgacgatagttgctacaacaatatcaagcccaactgccagaagaagaacctttgcactcataaacagctttattgccgtctttattcttgcagggcaactcactttgacgggtcgtatccttaccatagctggtgtaacagttgctatctgtgcatccccattcattgccacattgaatatggttgcccttgctctatggccaacttgggttgctgttgctgtcactgaaacaattcgaaaggtaactacttatgttttgacaagacctggaagggaattgctattcacagttgtctcacaggatgagaagtacaaagccaaggtttgtatagatgttgttgttcaaaggcttggtgatgcaacagctgccggaatatacagtttgttgttcagcagccttgagaagaaggcatccatggtcaccctctacgcgttgccgctctgcttcgtgtggcttctaacggcatttcatttgggccggctccagacaaaccttgtcaaggttcaggttgcttcttttgcatcttcgattcctagatag</cdnaseq>

Protein Sequence

<aaseq>MTTTTTTRHRLRDAAVASVVAVLPHEISPLISAASTFFFILSAY FAVLPLRDEGAISLGLSSLPGLFAGSLLLTLVAAPVASLAFSLPSIPKPRALVFIHRF FSLSLLVFFVLWFASTPGHSPSISQSSEDASNKPPGWGNHSWFYILVRISLFLWVSLL NLIAISSTWARVIDIMDSESGSRLFGFIGAGATLGQLFGSLFAATMALLGPFLLLFSS LLMELAALSSKGICTDDTHGSMELSSTIAEQSQNTEADDEMSSLVTSQGLPSQVSESQ KTKPEIFVMFEGFWLIARSPYLMYISLFLWLSAVVSSFFYFQKVTIVATTISSPTARR RTFALINSFIAVFILAGQLTLTGRILTIAGVTVAICASPFIATLNMVALALWPTWVAV AVTETIRKVTTYVLTRPGRELLFTVVSQDEKYKAKVCIDVVVQRLGDATAAGIYSLLF SSLEKKASMVTLYALPLCFVWLLTAFHLGRLQTNLVKVQVASFASSIPR</aaseq>

Gene Sequence

<dnaseqindica>36..152#247..411#1183..1281#1488..1574#1661..1729#1821..1917#2003..2105#2416..2632#2762..2875#3568..3699#3993..4073#4831..4947#5044..5145#agagtagacgacggagtttggattggaaatttggaatgacgacgacgacgacgactcggcaccgcctccgggatgcggcggtggcgtcagtggtggccgtcctcccccacgagatctccccgctcatcagcgccgcctccaccttcttcttcgtacgtatcgtatcgtatgcttccctctctctcttgcttcttgcttcttctcatttcatttccttgattcatctatggctttatggctgtgcagatcctcagcgcctactttgccgtgctgccgctgcgggacgagggggccatctccctgggcctctcctccctcccgggtctcttcgccggctccctcctcctcacccttgtcgccgcccccgtcgcctccctcgccttctccctcccatccatccccaaacccagggtccgtattcttcctcacttacattatctatttttattagcttgctttttatgccacaagccaaccggttagatttcttagatgcaaacttcggtaatgctttgtacctttacggacgcaatttttacacacttattgtagtcaatcacgcaaaaacaactgcattacattctcacaatcatgaaaactctttttaacgaatatgaaaacttgaattggttcagatgaaaacttgctatttgctctaagttcagatgtaggcacacttcttaaacctgaaggaatgcaattcttaactcaactcaattatttcaatgattgtattgttcttgctttagtgtttcactagttaaaagtagtatacctttattttgtttcatttgatcaagatgctagctttgccttctgtatgactggaacagttgatgaattactttagagtaccatgttaatcattgaatttgtgttcttttgtctgttgagaagaaaaaaataattctggtctgtgttgtgcgagcttctgtatatttaccacaggaatgcaataatttgggtatttcttcagtaaacccctttaatttaagatggttcagctagcttttccttgactaaataccagattcttgtcctcagctttcttccgtttgtttatcgatgatgaggtctacattttaagaatttgaaatattctgaagaacaatacaggctacaaatatccttgcagttatttcttattcactgacatcagctaattttatcatctatattcaggctttggttttcatacacagattcttcagtttatcccttcttgtcttttttgttctttggtttgcctctacccctgggcattccccttctatctcccaggtaatatacattgctattaatcttggtttttgcaattatgtacaatatagttattaaatttcaatgaaattgtgaagggaaaaaattaccgtaccatgaattttcactcagctgcttcgtctgtccccctgaatttcctaatctaagaatcattcctcacacaaaaaaaaacttatttttctctgtttcttggtgtacaaatcaagtcaagcgaagatgcttcaaataaacctcctggatggggaaaccacagttggttctacatattagtgagaataagcttgtttctttgggtacgacttttcatgctacatgggcatgttcatttattctaattctcaaactgattattgatttgagtaattatgtctatttgaaggtttccttgcttaatctcattgcaatatcatcaacatgggcaagagtaattgatatcatggatagtgaggtatcatttacagctgctctaaaacttattggcaaattacctacaactgattacttttgcttctgatattcttattactcttttaattcagtcaggttcaagattgtttggttttattggggccggtgctacgctcgggcaactttttggttcattatttgctgcaactatggcattgctagggccctgtacgtatgattttctgaacaagaaaacaaattcctgatttaaaatttctagaatgcattttcacatctccgaaatgtgcctcagttctgctcctgttttcatccctattgatggaacttgctgcattgtcatcgaaaggaatctgcactgatgatactcacggctcaatggaattgtcttctacaatgtatgtatccttctggacatggtttgcaatatcctgacttatctatgactgttaactatgacacgggcaaaacatatcattgatacggactaatgtccagttttactttcatttttaattcttaaacttaagtcacattatagtttgtaaattctttcttttataatcaacctcaaaacccttgaatggattttgttagtttgaacgtctcatagcaatacagatagattgcctgctgattatttgatttgatattttggtgattccttgttttgcttatgattgcatcccaatctattaccaactgcagagccgaacaaagccaaaatacagaggctgatgatgaaatgtcttcactggtcacttcacaaggattaccgtcccaagtctccgaatctcagaaaaccaaacctgagatttttgtgatgtttgaaggtttctggctgattgcacgctctccctatctgatgtatatatctctatttttgtggctgagcgctgttgtgtcgtccttcttttacttccaggtatggttcttctatatatgtctattgacatgaataagttccacatcactgtgaccatgttgtttccttagttacatcgttggaaggatccaccatttaccatccatttgaattctacctgatttccagaaagtgacgatagttgctacaacaatatcaagcccaactgccagaagaagaacctttgcactcataaacagctttattgccgtctttattcttgcagggcaactcactttgacggtatttatccatctccagattgtccttggttttattattaatagtacccctttttgcagtatgaataaatcttaacctgacaaattgtcctgcacaggaccactatgacatgcgtcatggtgaagtagctttatatgttgcaaactgaacattttgactcattaggctctccctcctttttgttttggtggggaaggctcaattagaaagctcagcttcatttctaacatctatttgatcatgcatgcgtatccccaaagtgcttatttttctcatacaacattgaacttattatttagtgatatcttcctttgttcttttgaagacaagaatgtgtcaaaatttcaatagattttccttctgaattctgatgtaattctgatacacgcatatgttcctcagtttgacaattaagagataattcgcatctcatatcgtcaaaagaagggaagagttcattacgatgtagtcaaaatgatgtattgcatgtctacatcactacattccaagtactgagcaacttattagcattggcaaaaacaatataatttaaaaatgtcctaaccaacaagttgttagaaaactgcaatgactgaggaagttttgctaattttgtttcttctttcatttcgaaaaaaaaaatctcgaaatttcgttactgattcctgttatgaattaaacaactatttcagggtcgtatccttaccatagctggtgtaacagttgctatctgtgcatccccattcattgccacattgaatatggttgcccttgctctatggccaacttgggttgctgttgctgtcactgaaacaattcgaaaggtacatatagaacagggagctatgattgaacttttggtgtaataaccgttttttaccattaaatgatactttccaaaagtcacatacaaataaatatgcatatctagatgtgagcattcattaccacctggatattcatatttgagagctgagacacattaatttgaatttaatctggaattttcgcatgtcaaggatatctaatcactcataatccatttttgtgcaatttagggttttcgatgttagctctaaattgctgctttcccaatctcatcttttattctctgtaggtaactacttatgttttgacaagacctggaagggaattgctattcacagttgtctcacaggatgagaagtacaaagccaaggtaaaagatatgtcattacctgtttgagtttagtgaccaataagaaacgaaataatacatttgcttgaatgcaatagatgagttgtgtcagtagtacacattatcatgcaccacagagaactaacaaaatttctaatccctggattgctcatcaattttcatcaatttgcattgtgttatagatgtctccggtagatatcaagcatatacacatcaacatatgtgatgtgtttttgttctcaaccctggttcaaggtggtcgtaggcatggcgcaagaggccgccctttggcatcttgcccatcctctgtcgccaacgcttccttcttagcgtgctaggtcatttggtcgtcccattgtaatcgcgagaataggattaagtccttgttttcctctccccccccccccttttcttcccaaaccccccttcttttctttgttttgccttttgtgtaaattttattcctcttaatacagaagtccgcaatccttttgcgtattccccaaaaaataaaatggctctgttttgaattcacctaggcacatcagagttagccttgtctcttaaaatggagagtgggtgattagcagcgaaatttgaagttgaatttccagattaagtaggctattgtagaaaaatagtcagtttttcagttgccttcttagtcttatatttaaaatcatcttaaatacgtgttcacaaatgtatgacccatttcagttttgactatttaactaatgaatatgaattctaataggtttgtatagatgttgttgttcaaaggcttggtgatgcaacagctgccggaatatacagtttgttgttcagcagccttgagaagaaggcatccatggtcaccctctacgcgttgccggtatgtgtcatggtttcagtcattgtatttgtaccccatcaccacataggattgcatatatcactgaagaactaattttctcccttctgataacagctctgcttcgtgtggcttctaacggcatttcatttgggccggctccagacaaaccttgtcaaggttcaggttgcttcttttgcatcttcgattcctagataggtacttggttacctatagtaaggtgattgtagcttacttaattcacttgtagtgttcttaacacaaatgcttgatacggggaactgctgcacgtacccacagaaatgcatactgtaagtaaccagagtgcagaaagaaatatggcacaacgacaagtcaggttgccagtggcgttgatactccttttgccttgtaagactaatagaagatttatcgagaaacatttttgttttcaatatagcattaggattactacaggaaggatacaacatgcatagaggaagaaggaatactgtatgactagatgaataacagatgagtatgtgatctctgcgtctattgttagaaacaatactgtcttgcagacggcagtgtatgtgacttgttacattgctatttgctaatgagaaaacaaggctgaatttgttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0112300, RefSeq:Os12g0112300