Difference between revisions of "Os12g0122000"

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(Created page with "{{JaponicaGene| GeneName = Os12g0122000| Description = SCARECROW| Version = NM_001072559.1 GI:115487079 GeneID:4351362| Length = 3494 bp| Definition = Oryza sativa Japoni...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0122000|
 
GeneName = Os12g0122000|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0122000

Description

SCARECROW

Version

NM_001072559.1 GI:115487079 GeneID:4351362

Length

3494 bp

Definition

Oryza sativa Japonica Group Os12g0122000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1042559..1046052

Sequence Coding Region

1042715..1044255,1045368..1045809

Expression

GEO Profiles:Os12g0122000

Genome Context

<gbrowseImage1> name=NC_008405:1042559..1046052 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1042559..1046052 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcctcctccctcctcctcttcccctcctcttcctcctccgccacccactcctcttattctccctcctcctcctctcatgccatcacctccttgctgcctcctctcccctccgaccaccatctcctcctctacctagaccaccaagaacaacaccacctcgccgccgccatggtccgcaagcgccccgcctccgacatggacctgccaccgccgcgccgccatgtcaccggcgacctgtccgatgtcacggccgccgcggcgggcgcgccgacgttgtctgccagcgcgcagctccccgcgctgcccacgcagctcccggcgttccaccacacggacatggacctcgccgcgcccgcgccgccggcgccgcagcaggtggcggcgggtgagggtgggccgcccagcacggcttgggtggatggcatcatccgtgacatcatcgccagcagcggcgccgcggtctccgtcgcgcagctcatccacaacgtgcgtgagatcatccggccatgtaaccccgacctcgcgtccatcctcgagctccgcctccgctctctcctcaactccgaccccgcgccgccgccgccgccgccgtcgcatcctgctctcctccctcccgacgccacggcgccaccgccaccacccacgtcggtcgccgcgctccctccccctccgccagcgcagcccgacaagcggcgtcgcgagcctcagtgtcaggagcaggagcccaaccagccgcagtcgccgaagccccccaccgcggaggaaaccgccgccgccgccgcggccgccgcagcggcggctgccgcggccgccaaggagcgtaaggaggagcagcggcggaagcagcgcgacgaggagggcctccacttgctgacgctgctgctccagtgcgcggagtcggtgaacgcggacaacctggacgaggcgcaccgcgcgctgctggagatcgcggagctcgccacgccgttcggcacctcgacgcagcgcgtggcggcctacttcgcggaggccatgtcggcgcggctggtgagctcgtgcctggggctgtacgcgccgctcccgagcccgtccccggcgggcgcgcgggtccacgggcgcgtggcggcggcgttccaggtgttcaacgggatcagcccgttcgtgaagttctcgcacttcacggcgaaccaggcgatccaggaggcgttcgagagggaggagagggtgcacatcatcgacctggacatcatgcaggggctccaatggccggggctgttccacatcctggcgtcgcggccgggggggccgccgagggtgaggctgaccgggctgggggcgtccatggaggcgctggaggcgacggggaagaggctgtcggacttcgcggacacgctgggattgccgttcgagttctgcccggtggctgacaaggccgggaatctggacccggagaagctgggcgtcacgcgccgcgaggccgtcgccgtccactggctgcgccactccctctacgatgtcaccggctccgactccaacacgctctggctcatccagaggttggcgccaaaggttgtaacaatggtggagcaggatctgagccactcaggctccttcctggcacgttttgtggaggccatccactactattcggcactgttcgactcgcttgatgcgagttacagcgaggatagcccggagcggcatgtcgtggagcaacaactcttgtcgcgggagatccgcaatgtgctagccgtgggcggtccagcacgcaccggcgatgttaagtttgggagctggcgcgaaaagcttgcgcagtcgggcttccgtgtgtcgtcgcttgctggaagcgctgctgctcaggctgcactgctgcttgggatgttcccttccgatggatacacgcttattgaggagaatggcgctctgaagctcggatggaaggatctgtgccttctcactgcctctgcttggcgcccaattcaggcttcgggacgttag</cdnaseq>

Protein Sequence

<aaseq>MGSSSLLLFPSSSSSATHSSYSPSSSSHAITSLLPPLPSDHHLL LYLDHQEQHHLAAAMVRKRPASDMDLPPPRRHVTGDLSDVTAAAAGAPTLSASAQLPA LPTQLPAFHHTDMDLAAPAPPAPQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQ LIHNVREIIRPCNPDLASILELRLRSLLNSDPAPPPPPPSHPALLPPDATAPPPPPTS VAALPPPPPAQPDKRRREPQCQEQEPNQPQSPKPPTAEETAAAAAAAAAAAAAAAKER KEEQRRKQRDEEGLHLLTLLLQCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAA YFAEAMSARLVSSCLGLYAPLPSPSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQ AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGASMEALEATG KRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSDSNT LWLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVE QQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFP SDGYTLIEENGALKLGWKDLCLLTASAWRPIQASGR</aaseq>

Gene Sequence

<dnaseqindica>157..1697#2810..3251#cctctcggcctcttcctctttactcccccttcgcgccatcgcctcgcttgcgccgcgccaaattccataaaaattccacccaacacaagcgttaggcctcccgcgcacgcccgtccgctcgccatgcccacggcctcttccccttggcgtttgtagatgggctcctcctccctcctcctcttcccctcctcttcctcctccgccacccactcctcttattctccctcctcctcctctcatgccatcacctccttgctgcctcctctcccctccgaccaccatctcctcctctacctagaccaccaagaacaacaccacctcgccgccgccatggtccgcaagcgccccgcctccgacatggacctgccaccgccgcgccgccatgtcaccggcgacctgtccgatgtcacggccgccgcggcgggcgcgccgacgttgtctgccagcgcgcagctccccgcgctgcccacgcagctcccggcgttccaccacacggacatggacctcgccgcgcccgcgccgccggcgccgcagcaggtggcggcgggtgagggtgggccgcccagcacggcttgggtggatggcatcatccgtgacatcatcgccagcagcggcgccgcggtctccgtcgcgcagctcatccacaacgtgcgtgagatcatccggccatgtaaccccgacctcgcgtccatcctcgagctccgcctccgctctctcctcaactccgaccccgcgccgccgccgccgccgccgtcgcatcctgctctcctccctcccgacgccacggcgccaccgccaccacccacgtcggtcgccgcgctccctccccctccgccagcgcagcccgacaagcggcgtcgcgagcctcagtgtcaggagcaggagcccaaccagccgcagtcgccgaagccccccaccgcggaggaaaccgccgccgccgccgcggccgccgcagcggcggctgccgcggccgccaaggagcgtaaggaggagcagcggcggaagcagcgcgacgaggagggcctccacttgctgacgctgctgctccagtgcgcggagtcggtgaacgcggacaacctggacgaggcgcaccgcgcgctgctggagatcgcggagctcgccacgccgttcggcacctcgacgcagcgcgtggcggcctacttcgcggaggccatgtcggcgcggctggtgagctcgtgcctggggctgtacgcgccgctcccgagcccgtccccggcgggcgcgcgggtccacgggcgcgtggcggcggcgttccaggtgttcaacgggatcagcccgttcgtgaagttctcgcacttcacggcgaaccaggcgatccaggaggcgttcgagagggaggagagggtgcacatcatcgacctggacatcatgcaggggctccaatggccggggctgttccacatcctggcgtcgcggccgggggggccgccgagggtgaggctgaccgggctgggggcgtccatggaggcgctggaggcgacggggaagaggctgtcggacttcgcggacacgctgggattgccgttcgagttctgcccggtggctgacaaggccgggaatctggacccggagaagctgggcgtcacgcgccgcgaggccgtcgccgtccactggctgcgccactccctctacgatgtcaccggctccgactccaacacgctctggctcatccagaggtactacacttttcttctctcttcccttgtcaactcgggaccccccggaatcatggctactttacaccctatacttctcattgacattgtgacctagtagtatactctatctatgcatcatcatatcagtggttagtagtactagccctagatcaccataggatgattaaggaggagtaaaaaaagatttgcgttttggagccctaaggccagtcacaatgggggtttcactggtgtgtcatgcacatttaataggggtaagactgaataaaaaatgattatttgcatgaaatggggatgagagagaaggaaagagtttcatcctggtgaaactcgtcagcgtcgtttccaagtcctcggtaacagagtgaaacccccgttgaggccgattcgtttcattcaccggatctcttgcgtccgcctccgccgtgcgacctccgcattctcccgcgccgcgccggattttgggtacaaatgatcccagcaacttgtatcaattaaatgctttgcttagtcttggaaacgtcaaagtgaaacccctccactgtggggattgtttcataaaagatttcatttgagagaagatggtataatattttgggtagccgtgcaatgacactagccattgtgactggcctaaaagtatgtcattatggccaactttttaggcttagaaaggttgcaactttctagtggttctgtggtatcaagcttctccatggtctttggtgatccgagaagtgggaaagatttctcctccatttggtttgtggatcactatgaacgagctaaaagttcttatcatcatgaccaacttttcatgccaaaaggtctcagctttctagttctaagtgccaccaatgttgattattaaattgaaatggctgcaatctatacacagttcatactagagatcacatagtagtggactgcaatagatatgtcccactgtacttgcaaaaaccatgaaggcaaggcaaccaatttaggtgtccttgagaacttattgttatcatttatagttctaaatgttgctagttgagtcattcttgtcgaacagaatcataattaatttgtgtactgatcttgactctgtggaccacacaaatcaggttggcgccaaaggttgtaacaatggtggagcaggatctgagccactcaggctccttcctggcacgttttgtggaggccatccactactattcggcactgttcgactcgcttgatgcgagttacagcgaggatagcccggagcggcatgtcgtggagcaacaactcttgtcgcgggagatccgcaatgtgctagccgtgggcggtccagcacgcaccggcgatgttaagtttgggagctggcgcgaaaagcttgcgcagtcgggcttccgtgtgtcgtcgcttgctggaagcgctgctgctcaggctgcactgctgcttgggatgttcccttccgatggatacacgcttattgaggagaatggcgctctgaagctcggatggaaggatctgtgccttctcactgcctctgcttggcgcccaattcaggcttcgggacgttagtattgagggggaatttatagagctgaagtatcacttgatcttacttaggtgcaattacctagtccttttgcttcttttagctgctcaatttggtcaattctgagaaaagaaaaataaaaaaaaattctgatcactaattttcagatctccacacagtggtagttactaatgtgcaacttagctttagcttttattctgttcatgctccagttaaccattctgtccaatttagtttattttgca</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0122000, RefSeq:Os12g0122000