Difference between revisions of "Os08g0567200"
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[[Category:Japonica Chromosome 8]] | [[Category:Japonica Chromosome 8]] | ||
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Revision as of 00:52, 24 October 2012
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Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os08g0567200 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001069082.1 GI:115477902 GeneID:4346363 |
| Length |
7877 bp |
| Definition |
Oryza sativa Japonica Group Os08g0567200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:28489042..28496918 |
| Sequence Coding Region |
28495303..28495356,28495437..28495522,28495609..28495705,28496292..28496389,28496472..28496844 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:28489042..28496918 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:28489042..28496918 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcgtctcggaaccctaatcctcctcccggatcctcctcctcggggaccaattacttccctctccccttccatctgcagcagcaaccgccgcagccgccgccgatggcgatggcgagcacctaccagtaccagcagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacccccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgccaatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccccgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccgacaatgactatcgcttattttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacggttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaaacaaaaggatatggatttgtgagcttttcaaaccctactgaccttgctggagcaattaaagaaatgaatgggaagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggaccgatgttgatgctctagaaagacagaagaatcacatccagaagaaacctaaaatgcccaagaaaagtatccttcacaagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSSSRNPNPPPGSSSSGTNYFPLPFHLQQQPPQPPPMAMASTYQ YQQYQQLQQAQQLFQRDAQTITPEALESVKAALATSDVLDPANARATATSSSDPAAKK KAIPRRAAGQSWEDPTLTDWPDNDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR DKRTGKTKGYGFVSFSNPTDLAGAIKEMNGKYVGNRPIKLRKSNWKERTDVDALERQK NHIQKKPKMPKKSILHK</aaseq> |
| Gene Sequence |
<dnaseqindica>1563..1616#1397..1482#1214..1310#530..627#75..447#aagccaccccaaattcgattcgattcgataagattaagaaggctagcccgatccaagaagagaaggaagaagcgatgtcgtcgtctcggaaccctaatcctcctcccggatcctcctcctcggggaccaattacttccctctccccttccatctgcagcagcaaccgccgcagccgccgccgatggcgatggcgagcacctaccagtaccagcagtaccagcagctgcagcaggcgcagcagctcttccaacgcgacgcgcagaccatcacccccgaggcgctcgagagcgtcaaggccgccctcgccaccagcgacgtcctcgaccccgccaatgccagagccaccgcaacctcctcctccgaccctgccgccaagaagaaagccatcccccgccgcgccgccggccaatcctgggaggatcccaccctcaccgactggcccgacagtatgtcatgctcctaactttctaatttatttatgctattgatttttcttttggatctatctcatcgtgtaaatatttacagatgactatcgcttattttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacggttcccctccttcaacatggcaagggtatggaaaagtttcgacatactctctacttccactccaagatcaaggacattaagctagctgggggttttgaaaatttacctgaggtagccttaactgtagcgcaggtccttttgggtttttttcatttatttttactccaagtattgtgcgtggttagtgtcctatgtccagatttattggcatactggttctaccctttatgatgtcatacttaaataatggctttgcattggttgtcacttttaatgtttgatccatgtatgctgtataatgtattcccttcccaacaaattcataggatattgcaagggtttaggaggagcatttgacatatatctactttagataggatgtccagaaaaaaaaaagcctgataattttgccaaacagatatatgataaaatgcaattgtgaatattggagcatgtttaacaccctccaactataataactagctcaacccttcgcccaaaatccctcttccctccctccctgtgtttgttatgttttcttatgtacacagtagtacttattggtatttcttgaggctggccataatttgtacttttaccctttctttcaggttgttcgagataagagaactggcaaaacaaaaggatatggatttgtgagcttttcaaaccctactgaccttgctggagcaattaaagaaatgaatggtttgaagtacccaacttgttcaattactgccattgttcagcttcgtttttgtactgctaccttattacttttgacactattgcagggaagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggaccgatgttgatgctctagaaagacagaaggtttgtgtcatttttctttctttgatccagtgtatcgctcccttcgtatgcttacctttgttagtacatttgtctttcagaatcacatccagaagaaacctaaaatgcccaagaaaagtatccttcacaagtaaagctatattagccctactaagcgccatccatgtaaacagtaagttcctttatcaatatacatgctaagcttttgactaaaaacaactggtgctctggaagtacagactgacatctattctcttacattcccttagccaaatactggctgtattctcttggcacatcatcttttgtcatgtggggccagacatacacacgccgcaggagggcgcgtgacatccgccgagcggcggagcgcgcagcagcacgcgagggaaacgcgcgcgacgcagctgcgcccgcgcccgcgatcaccgcggctgtagatggaagtggctaggagagattttaggaataagttgtttcctagtttgttggccaattgggccatatatttccctgtacttggacaattgaggattaatcaagaattaccacctaatctctcctctacctcacgtaagccaccggtctgagggggataacctcgcggtgaaggactggagcgcgactacgagctccgtagtcgcggtccgccgtcgttgggcgtcaaggcgcttgacaacctggtatcggtgtctcgtcgatccacttcttcatccaccgccgcccctccagcctccaccacagcagccgccggcccctcctctcccaccaccagcccctgcaccagccctccaccatcccctgtttcgtcgtccgtcgcctccactgccggcgacatgtctgagcacggcgacctcaaggctgccatcgacgccctcaccaagaatgtggcgctcatgcagtcgtccattcaggccaacgccaaggccatcgccgacatcacttcctcatcgtccggcgccggacctcggtcccactccggcgagcaccctcaggatcgtccaccgaagcactggcgcccggagttcccgcgctatgacggcaagaccgatccgctcatcttcatcaacaaatgcgaatccttcttcctgcagcagcgcatcatgccggaggaacgcgtttggatggcgtcatacaacctcaacgacgtcgcccaattgtggtacatgcaggtgcaggaggacgagggcactccgaattggccgcgcttcaaggacctcctcaacctgaggtttggtcccccgctccgctcggcgcccctcttcgagctctcgtcctgccgccgcaccgggacggtgacggagtaccaggaccagtggcaggcgctgctgccccgcgccggcaagctggatgaagcccagcgcatccagctgttcaccgggggtctccagccaccgctcagcctgcaggtccaaatgcagaacccgcagtccctcgcctccgccatgagcctggccaggcagttcgagctactggctgagtacacgggccctccagcccctgctgcaccagcccgggctcccgcgcgtgggctgctgggcgcgtcgctgccgctgctggccctgccggcgcctccacctccagccgcgcgcgcaccggcggccgcgaacccggctgcgaacgcgggggctgcaaacccgggggacggccgccaggccaagcggctctcccgggaggagcaggcggagcgccgccgattgggcctctgctacaactgcaacgaaccgtacagcagaggccacaatcgcgtctgccggcgcatcttccacatcgccggcgtggaactcgacgacgacgacaacgctggccacgaggagccggccaccgagtcgccggtcttctccctgcacgcagtcgctggcgtagccgccctcatcgccctcctcgacgttagcctggggcgcgccgccctcatcgccctcctcgacagtggttccacccacaatttcatctcggccggggcagccgagcgcaccgggctcgtggtggagccccgacctcggctcacagcggtcgtggctaatggcgagcgggtgtcctgccccggcgtcatccgtgcggcgccggtctccatcgacggcaccatctttcacatcgacctctttgttatgccgcttgcaggttatgatgtggtgctcggcactcaatggatggccacccttggccccatcgtgtgggattttgccgctccgtccatggcgttccagctctgggggcgctccttccactggaccggggtgctggccgaccatgcgccgcgcctccactctacggcggccagcacatccctcctcgacgagctgctggccaccttcgacgacgtcttcgccgagcccacaggctccctccaccgcgcgcacgcgaccaccacatcatcctccagccggacgcggcgccggtggccgttcgcccataccgctacccggcggctcacaaggacgaactcgagcggcaatgcgccgccatgatccagcagggcatcgtccgccggagcgactcggcgttctcctcccccgtcctcctcgtcaagaaggccgatggctcatggcgtttctgcgtcgactaccgcgccctgaacgccctcaccgtcaaggacgcgttccccatccccgtcgtcgacgagctcttggatgagctcaatggggcgcacttcttcaccaagctcgacctgaggtcggggtaccaccaggtgcggatgcgagccgaggacgtccacaaaacggcgttccgcacccacgacggcctctacgagttcctggtgatgccgttcgggctgtgcaacgcccctgcgacattccaggcgctcatgaacgaagtcctgcgcccctacctccgccggtttgtgcttgtgttcttcgatgacattttgatctacagctccagttgggcggaccacctccgacacctccgcgccgtactcgcctcgctgcggcagcaccgcctctttgtgaagaggtccaagtgcgcgttcggtgttccctccgtcggctacctcggccacatcatctcggcggatggcgtcgctatggaccccgccaaggtccaggcgatccacgactggccgcagccccgctcaccacgcgcggtgcgtggcttcctcggcttggcgggctactacaggaagttcgtccacaactacggcgccatcgccgcccccctcacggcccttttgaagaaggaggggtttacgtggaacgacgacgccgcggctgccttcaccgccctcaaggccgcggtcacgtcggcaccggtgctggccttgccggacttcacaaagcccttcgtcgtggagtgcgacgcgtccacctacggctttggggctgttcttctccaggaggctcacccgctcgcgttcttcagccggccagtggctccccgacaccgctcccttgccgcgtacgaacgggagctcatcggcctcgtcctagctgtgcggcactggaggccgtacttgtgggggcgccgcttcaccgtccggacgaatcactacagcctcaagtacctcctcgaccagcgcctcgccacgatcccccaacaccactgggttgggaagctgctcggcttcgacttcgtcgtcgagtacaagtccggggcgaccaacacggtggccgacgccctctccagacgcgacaccgaggaggagccggtggtcgcgcttctcgcggtctcgggcaaccgtttcgacttcatcggccgcctccgtcaggcccaggcgactgatccggccttggtggctgtccacgaggagctccgtgcgggcacccgtgctgcgccctggagtgtggttgacggcatgatcctgtacgacagccgcctctacattccaccatcctcgccgctcctgccggaaattgttgctgccatccacgacgacgggcacgagggtgtccagcgcacgctgcaccgcctccgccgcgacttccacttccccaatatgcgccgctgcgtgcaggacttcgtgcgggaatgttccacctgccagcggtacaagagcgagcaccttcacccggccgggctgctgctgcccctgccgattcccacagcagtctgggccgacattggcctcgactttgtggaagcgctgcccaaggtgaacgggaagtcggtgatcctttccgtcgtcgaccgcttcagcaagtactgccacttcatcccgctggcgcacccgtacaccgccgagtccgtggctcaggcgttcttcaccgacatcgtccgcctccacggcatgccgcagtccatcgtctccgaccgcgacccggtgttcacttcactgttttggcgtgagctgatgcgcctcatgggcaccaagctgcacatgacgtccgccttccaccctcagtctgatggccagacggaggcggctaaccgcgtcattgtcatgtacctgcgttgttttacaggtgaccgaccccagcagtggctccgctggctgccttgggctgaattcgtgtataacacggcctaccagtcctcgctcaaggagacgcccttccgtgtggtgtacggccgtgacccgcccaccatccgctcgtatgagcctggtgagacgcgtgttgcagctgtcgcaagggacatggaggagcgagagaccttcctggctgaagtccgccaccgcctggagcaagctcaagccctccagaagctctactacgaccggcagcaccgcccggtgtcctatcaggttggcgactgggcgctgctgcgccttcgtcagcgcaccatggcgtccctgcctcaagcgcagcccggcaagctgaagccgcgcttcgtcggtccctaccgcgtcatcgagctcatcaacgacgtcgctgttcgcctggagctccctcctcaagcccgcatccacgacgtgttccacgtgggtgtcctcaagaagtttgttggcgctccaccagcagctcctccacctctgccacctatccagcatggcacggtgactccagagccgctccgtgtccagcgtgctcgcttggcgcgtggcgttcgccagctgctcgtccactggcgcggcgaacctccagagtctgcgacatgggaagatgccgaggcgttccacgagcagttccctacctttcagctcgaggacgagctgggtctcgagggggggagagatgtcatgtggggccagacatacacacgccgcaggagggcgcgtgacatccgccgagcggcggagcgcgcagcagcacgcgagggaaacgcgcgcgacgcagctgcgcccgcgcccgcgatcaccgcggctgtagatggaagtggctaggagagattttaggaataagttgtttcctagtttgttggccaattgggccatatatttccctgtacttggacaattgaggattaatcaagaattaccacctaatctctcctctacctcacgtaagccaccggtctgagggggataacctcgcggtgaaggactggagcgcgactacgagctccgtagtcgcggtccgccgtcgttgggcgtcaaggcgcttgacatctttgctggtttgagcattgtattattgtttgtctttagctttatcatgtaacaaatgttgagtttgttatcttgcacgacatctcatggagaaaaaattgaggaaataaaacacatcatagattatgtaatccttcatatcttaatcattagtttcccttattaagtcatcaggtgggtgattatgtattaaggaatctatactctgtttgcctctgtcttttgaaaatcagtgtccttaagagcaagccaagccacagttcagatggttattgtctttttcctataagtatgttttctatcttatttccagttgcatagccctaaggtttggtttggcatatcttgtatgatcatcttaaagtccaacccgtttgattccagttaggacttaggaccaggaaattaaaaatgctgttttgtttatttctagttttagtgcatgataatttttttgtcaactttaacccttttcaatgtgcacaagctgctttatctgaagtattgtgtaattcatgctttagtgcttaccattggaatgggctgattgatgggttgtacttgcagtactttgttgggtgatggggctcaagaaaactactcttactgcaaaggttgtggaccagggagggtgtacatttgactgcagctgtctgttagcagagtggtgcgtcgcttctaagcaatttttcttcttacgacaagctgatgtttacatctgcaggaagtttgttaaagctgaagctagttttgctgatgtttactgagaatgactccctagaatggatggtttgcttaaggtggtaatgatgtgtatttagatatggcatttgcatttaaggatggcattgcaatgtaataaagatgttgttggtattgtagtttatcttataaagtggcatcgcagtac</dnaseqindica> 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| External Link(s) |
