Difference between revisions of "Os03g0113100"
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[[Category:Japonica Chromosome 3]] | [[Category:Japonica Chromosome 3]] | ||
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Revision as of 15:04, 27 October 2012
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Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os03g0113100 |
|---|---|
| Description |
Thymidine kinase family protein |
| Version |
NM_001055269.1 GI:115450266 GeneID:4331376 |
| Length |
3582 bp |
| Definition |
Oryza sativa Japonica Group Os03g0113100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:714543..718124 |
| Sequence Coding Region |
714787..715091,715943..716087,717173..717294,717662..717920 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:714543..718124 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:714543..718124 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagctccatttgcgccatgagatccctcctcgccgcctccaccttcctccgctccggcgcttcccctctgctgcggcccctttcccgtcctctcccttcccgcctgaatctttcccgattcggtccggtgaggccggtctctgcggcggcggcggcggcggacaagtctcgaggcggaggcggctccgcgatggaggcccagccgtcgtatcccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctccgacgcgtgcaggtcgaggccggcactggcaggaacgtggcactcatcaagtctgacaaggacaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctgggctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaaggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaactaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatccaaggttatccatgctttcaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MSSICAMRSLLAASTFLRSGASPLLRPLSRPLPSRLNLSRFGPV RPVSAAAAAADKSRGGGGSAMEAQPSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGR NVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQ FFDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCG RRAFFTLRKTRETKTELIGGADVYMPVCRQHYLDGQIVIEATRIVLDLEKSKVIHAFK </aaseq> |
| Gene Sequence |
<dnaseqindica>245..549#1401..1545#2631..2752#3120..3378#tcctctcctctcttctcctctcccgccgccgccgccgccgcacccgccgatctccatcctgcgagcagcggcggcgctccacctttccctccccaaatttcaaaactcgattcgaaatctgccacgctttattcccgccatctcattctcacctacccaattgtctcctcctcctcaaatttaggttgaaaaagatattcccggcgcctccccacaatcagctagctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgccgcctccaccttcctccgctccggcgcttcccctctgctgcggcccctttcccgtcctctcccttcccgcctgaatctttcccgattcggtccggtgaggccggtctctgcggcggcggcggcggcggacaagtctcgaggcggaggcggctccgcgatggaggcccagccgtcgtatcccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctccgacgcgtgcaggtcgaggccggcactggcaggtattccttcttcgctgtttcctcacaaatggtagggctacttactggctagtgacatccctcacccaaaatcttacatctaacaactctattacatgttcttatgttaaaggtgctcgttatctagtgatgtcctgatccatggtatcaatgtaaagagtacagaaaatactttaacatatagggtctgttcagattgatgccaaaattttggtaaattgacaacactgtcaagttttggtagaatagactcaatataatgttgctaaaattccatagacattaccaatatttggtaacaaactaaatgcagccacatgattgccaattttactaaactaaataatggtatgatttaaaatgacatcaatctgaacaggctcataaacaagagtctctgtgaatgttttgatgccttgttgcagatggatgtgctttgaattttgattagggtgtctgctttgtggtacaaagttttatgttaaatggagctctaacacggcatgcgtgaagaattgagggtctgtttggttgttgcctaacattgccataactcaatttgccatagatgtggcatggcaaacaaagtgtggccaacaatttgttggtcacaagtgtggcaatgtttagctagaaaatgagtatatgacatgtaggcccatgaaacaagaaagtgtggcttgccacaactgaaacaagcaaccaaacgctaagctaacaatctgtggcatgcctaacatgtggtgtggcaatgtgtggcaccaaaccaaacagccccttgaatgcctaaggaactttgtttcttgagtgggttatgcacattttgacatttttcatcccttgaaaagcaggaacgtggcactcatcaagtctgacaaggacaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctgggctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggtaatcaatattttatatttttttctttcaccaaaccgttagtataaagaattagaaagcatatgctgataagaattatgaatgctatagagacttgagtgtttaatgttgcacatggtaagtcaggtactgtagcagtatattgaaatatcatgtaatgagatttgactcatgcttgatatccctggccttcagaagaaatgtttgcacaatctgtccatctgaatcaaagcaaggacaccatcacaagttgactatacttggatatatcttagatttagcttgccctctaagtagaaaatagatgattatctgtttcattttccatgtgtgcctaacattatacgagaacattttgagaacttggcaaaaggttttgtcatgtgggttgcatgtacagctgctggcacttggcagttgccatgccccacatgcccagcacacaagctattttggctgcattttaggagcaagctgtctcccttaattagatgattttgctagatactcttgttcaatccctatttggtagccctttttcaccatggtattgttgatggcaggcttaatatcattttagaagctagaaagataaaaatcctgataatcttcacctcttttctcagccttcatctaggtctgtcttttatgcaaattgccatctttttaaatgattcagtggacacatatatgctagtatttggtatgaggatcaaactattatacgatgagtcagtcattacaatgcctcattcctcaattttctaccacgcatgtgctattcggggaaataaatgaggagtggtagcacaatccgttctaatgctcaaaccaaatgaggagttagggtaggattgtccttgactatcttgtttctcaaaccaatcatcttgctagtttgttggaagtagggattgcaatggggccctgacccctgatacctggtggggaattctcccattaggggccagtgataggtattttatttacagtacagttggatgtcatcttacatggtgtaacaaggtagtgttagagccaacataaagatgaaaatatggtagtcactgaaataactcttgcaggttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaaggtacttactggatgatttatttcaaatctaaaccgagggtgagtttagatctctaccataccaaaatatggtagacaataactgtatcaaaaattccacattaccaaaattttggtaatatacacacctgttcatgtcaccgtattgcaattttggcacaaaataacacatcctttccatttacaacctatcaaaattacccaagcactagcaaagtttggtacagcatcaaacaataagctaggactaggcatgttctttatctgaatattagcactaaactcgtggtaaataggatatttggatgcaaaacccaacattttccagtgaatattgtgctagcatttgatgattgtgatactggcaggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaactaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatccaaggttatccatgctttcaagtgagtgaatagctcattgtatcctttttacttgcaaggcttaccatgtgtaacactatcatcatcaaccatgcaatccatctagttatcgtagaagatgatggaaagaccacaatattcagagactctccattaaacgattgtaaatatgtatcagtccagattctgttgggaatgaattttatcttggtttgtggatggaggaatt</dnaseqindica> |
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