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| Line 33: |
Line 33: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{IndicaGene|
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| − | GeneName = BGIOSGA000127|
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| − | Description = Putative uncharacterized protein|
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| − | Definition = Oryza sativa Indica Group BGIOSGA000127, complete gene.|
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| − | tag = P0614D08.28|
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| − | tid = BGIOSGA000127-TA|
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| − | pid = BGIOSGA000127-PA|
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| − | Length = 8888|
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| − | Source = Oryza sativa Indica Group
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| − |
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| − | ORGANISM Oryza sativa Indica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Indica Chromosome 1|Chromosome 4]]|
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| − | AP = Chromosome 1:45466384..45470464|
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| − | CDS = 45470346..45470464,45469984..45470244,45469686..45469704,45467716..45467935,45467440..45467621<br>,45467059..45467348,45466828..45466957,45466384..45466740|
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| − | GCID = <gbrowseImage1>
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| − | name=IndicaChromosome01:45466384..45470464
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| − | source=RiceIndica01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=IndicaChromosome01:45466384..45470464
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| − | source=RiceIndica01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>ATGGCGCTCTCTCGCTCCGTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGATCGAGATAAAATTCGGCTGCGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCTGTTCTCTCCAACTTCGCCTTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACGACGTACAGCACGGGGCTCCGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTCGTGTCCGCCTTCAACGGCTGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTTGCTTCTTGGATCACTGGCTGGTTTAACATCACGGGACAGTGGGCCGCTACCACGAGCGTGGACTTCGCGTTGGCGCAGTTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAACGGCGGTGGCTACATGGCCTCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTCATCCACGGCGCTATCAACAGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGAGCTTTTTGGAATGCGGCAGGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACGGAAAGGGCGAGCGTTGAGTTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATACGCGACAAGGCTTACATTTTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGCTACGACACATCTGCTCATATGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATCGGGATCGTAACCTCGGTTGCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTCACGTCGGCGGTGACGGACATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAACGCGGTTGCTCAAGCTTTCTACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGGATCCTCTGCTTGGGAGTCGTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACTAGCAACTCGAGGATGGCGTATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTCTGGCACCGAGTGAACAAGCAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTGGCGTTCATCATGGCTCTGACATCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCCATCGCGACGATAGGGCTCTGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACGGCGAGGGGATCCTTCGTTCCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGCTGGGCCGCCGTGCTCTGGGTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTACCCGGTGGCGGAGGAGACGTTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTCACCGTCGGCGCGTGGGCTCTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACTAATGACGGCCCGCTGTGA</cdnaseq>|
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| − | AA = <aaseq>MALSRSVEVAVPADPAGDGDRDKIRLRQLGYKQELKRGLSVLSNFAFSFSIISVMAGVTTTYSTGLRYGGPVSMTLGWLVVSAFNGCMALSMAEICSAYPTSGGLYYWSAKLAGNDWAPFASWITGWFNITGQWAATTSVDFALAQLVQVIVLLSTGGANGGGYMASNYVVLAIYGAMLVIHGAINSLPIQCLSWFGQLGAFWNAAGVFVLVALIPAVATERASVEFIFTHFNTENGMGIRDKAYILLIGLLMSQYAMAGYDTSAHMTEETKNADWSGPIGIVTSVALSTVFGWIYIVSLTSAVTDIPYLLSPDNDAGGNAVAQAFYTTFHRRYGSGLGGILCLGVVAVAVFLCGLACITSNSRMAYAFSRDGAMPFSKVWHRVNKQEVPINAVWLSVVVAFIMALTSLGSQVAFQAMVSIATIGLCISYALPIFFRVTTARGSFVPGPFHLGKYGIVVGWAAVLWVAAVTVLFSLPVAYPVAEETFNYTPVAVGGVLLLTVGAWALRARFWFQGPITNTNDGPL</aaseq>|
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| − | DNA = <dnaseqindica>1..119#221..481#761..779#2530..2749#2844..3025#3117..3406#3508..3637#3725..4081#ATGGCGCTCTCTCGCTCCGTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGATCGAGATAAAATTCGGCTGCGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCGTAAGGAGCAGCTTATCTTATGAATTTACCATGCGAAGCCTCGCAAACTACTACTGTTCATTGGCATCTTTGGTTAATTGTTTTTGGCCTTCGTGAGCTAGTGTTCTCTCCAACTTCGCCTTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACGACGTACAGCACGGGGCTCCGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTCGTGTCCGCCTTCAACGGCTGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTACTACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTTGCTTCTTGGATCACTGGCTGGTGAGTACGTGTATGTATTGTGAATTGTCCGTCTCTCATGAACTTCTCGTTCCAAGAAATGAGGAAAGCCTTGCAAAAATTTCATACTCCAGCATCTTTTAGGCTTCGTTTAAAATAGGATATTTTTATAGGATTTTCGCGGAAATTGATCGATCGTATATAAAAATCTTGTAAAACTCGCACATTCCAAAAGAGACCTTTATTTTCTCAAAAAGAAAAAAAGAGAGAAAGACCTTTATCTCTTGTTCTGTTTTTCATTCCTTGTGTTCTGCTTTGCAGGTTTAACATCACGGGACAGGTAGGTACATTCGGATTTCTGGGCCCGGGCTTCTCGCTAATTGATGGGCCTTTTTATTGGGCCATGAGTACAGAAAGGAATAAGTTCACTTTGGGTCCCTTTATTTGTTGCCCAGTCCGATTTTCGTCCCTTAATCACAAAACCGGGTACGACGGATCCCCTAACTTACGAAACCGTTTAAATTCCCTCGGCAGTATTTGACTCTGGTTTTGGCTGAGGTGGCACCGACGTGGCTTCTTTTGACTAGATTTTTGTCCAACGTGTTATTGACGTGGCGCTGATGGGGCAATTAGATCCCAAAAAAATAATAAAACTTATGGGGCCCACATGTCAGTTGCACACACAAATTAATAAAAAAGGTGGGCCCATGTGGACCCACACGTCATCCTCACAACCTCTTCTCTCTGTCCCCTCTCTCTCCCTCTTGTCTCTCTCCCGCTCATGGGCGGCGGAGCGACGAGGAGGCTGGCTGGAACGGCGCACGGCGGCCGAGCGACGAGGAGGCTGGCTGGAGCGGGCGACGGCGTGGCGGCGCTGGGGGGGCGGGGGTGGACGGAGCGGGTGCCCCGGCGCATGGCGTAGAACACCTCCTGCTCGAACGCCGGGTCGCCGTCGGCGAGGAGGCGGTGGACGAGCACCAGCATCTTGAGCGTGACGCCCAGGCAGCGTGACAGCGACGCGACGCAGGCGCGGGAGTGGAGCGTGAGCGCAATCACCTCCCGGACGTGGTGCTCATCGGCGGGGAAGCCATGGACGGTGTGGGAGAGGTCACGCTTGACCTCTTGACACATGGATACTCTCGTTTAATTATCTCGTTATTACAAACATGGTTAATTACAACTTCCAAATAAAGATCAAAGCAGACATATTATGTTAAACTTGTGCCTGCAAAAGCTGTTTTATTCAGTTAGGATAGTACTTTCCTTTTATGCACGTTATGTGTTTTAGCCTTTTAGGCTAGCTAATATTATTACTTGTAGTACTAGAACACATGCAGGAAATCTTAGCCGATTGCATGCTACTGAGCTACTCGATCGCTCATGGATTGATTGAGACGCCAGAGCTACACCTTGGTGTCCGCCTTGCCGCTGGTCGTCGAGTCATCGGCGCTGCCGCCGTCGGCGACCTTGTTGTTCCTCCCCTCGGCCATCTCCACGTCGTCGTCGCCGGCCTGCTTGCCGCGATTGCCGCGGCGGCGGCGAGGAGGAAGACGAAGATGCTGGCGGCAGCAGCGGCGGCGAGGAGGAAGACGAAGATGCCGGCGGTGGCGGCGCGCTGGGGGTGGTGTCGGGTGTGGGGGATGCGTTCGCCCCGCCTCGCCTCCTTCCCCCTGCGCACATGAAGAAGAGAGGACGATGAATATGAGAGAGAAGGGAGGGGGAAGAAGGGAGGAGTAGCTGACATGTGGGCCACCATTTTAAAATTATTATTTTTAGCTGACATGCGGGTCCCATGTTTTTTATTATTTTTTCGAGATATAATTGCCACGTAAGCGCCACGTCAATGCCACGTGGGACGAATATCTAGTCAAACAAGCCACGTAGTCGCCACATCAGCCAAAATCACCTTCAAAACCGCTGAGGGACCTCGTCTACACGGTTTTTGTAAGTTGGGGGATGGGTCATACCCGGTTTTGCGGTCAAGAACGAAAATCGGACTGAGTGACAAATAGAGGGACTCAATGTGAACTTATTCCGTACAGAAAAGCCTAACAGTGGGCTGACGCTATATGGATCTCTTGATGACATAGTGGGCCGCTACCACGAGCGTGGACTTCGCGTTGGCGCAGTTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAACGGCGGTGGCTACATGGCCTCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTCATCCACGGCGCTATCAACAGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGAGCTTTTTGGAATGCGGCAGGTAATGAAATTATTTTTTTTCCTCCTCTTGCAATCGATCTCCTTATTAAGTCACCATCGATTCCATCATCACTCTATTGTTCTTCGTTTGCTAGGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACGGAAAGGGCGAGCGTTGAGTTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATACGCGACAAGGCTTACATTTTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGCTACGACACATCTGCTCATATGGTACGTTGCGATTTCGCCCCTAGACACAGTAGTCCATATCTAAACTGCAAATACTACTGACACTCTGACAGTATATCATTCTATGCATCAGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATCGGGATCGTAACCTCGGTTGCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTCACGTCGGCGGTGACGGACATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAACGCGGTTGCTCAAGCTTTCTACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGGATCCTCTGCTTGGGAGTCGTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACTAGCAACTCGAGGTCAGATCGATCGATCAGCTGACGTGTTCAGGAATTTAGCTTAGCTTAATTAGCTACGTACATGTTGATAATTTCCTAGGTTAATTAGCCACTGCATGCAGGATGGCGTATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTCTGGCACCGAGTGAACAAGCAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTGGCGTTCATCATGGCTCTGACAGTGAGTTAATTCGTACCACTGCTGATTAATTTTCATGCTTGATTCTCAGTTCAGAATAACCAGAATTATGCTTTATTTTTATGACAGTCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCCATCGCGACGATAGGGCTCTGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACGGCGAGGGGATCCTTCGTTCCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGCTGGGCCGCCGTGCTCTGGGTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTACCCGGTGGCGGAGGAGACGTTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTCACCGTCGGCGCGTGGGCTCTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACTAATGACGGCCCGCTGTGA</dnaseqindica>|
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| − | Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA000127 EnsemblPlants:BGIOSGA000127]|
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| − | }}
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| − | [[Category:Genes]]
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| − | [[Category:Indica mRNA]]
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| − | [[Category:Oryza Sativa Indica Group]]
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| − | [[Category:Indica Genes]]
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| − | [[Category:Indica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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Annotated Information
Function
研究人员从水稻籼稻品种93-11中克隆并鉴定了控制水稻籼粳分类的基因并将其命名为PHR1。转基因功能互补实验证明PHR1是区分水稻籼粳分类的基因。在水稻中抑制或过量表达PHR1，得到具不同抗病虫害能力的转基因水稻，表明可以利用基因工程技术调控该基因从而调节植物抗性。
Mutation
Expression
Evolution
Knowledge Extension
Labs working on this gene
References
Yanchun Yu,Tian Tang, Qian Qian, YonghongWang,Meixian Yan,Dali Zeng, Bin Han, Chung-IWu,Suhua Shi, and Jiayang Lia,Independent Losses of Function in a Polyphenol Oxidase in Rice: Differentiation in Grain Discoloration between Subspecies and the Role of Positive Selection under Domestication.The Plant Cell, 2008.Vol. 20: 2946–2959,
Structured Information
