Difference between revisions of "Os06g0330100"
Jiangnanji (talk | contribs) (→References) |
Jiangnanji (talk | contribs) (→Labs working on this gene) |
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==Labs working on this gene== | ==Labs working on this gene== | ||
| − | + | Lihuang Zhu | |
| + | personal homepage:http://sourcedb.cas.cn/sourcedb_genetics_cas/yw/zjrc/pgr/200907/t20090721_2130981.html | ||
| + | Jianli Wu | ||
| + | personal home page:http://www.researchgate.net/profile/Jianli_Wu | ||
==References== | ==References== | ||
Revision as of 13:49, 20 May 2014
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Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
Lihuang Zhu personal homepage:http://sourcedb.cas.cn/sourcedb_genetics_cas/yw/zjrc/pgr/200907/t20090721_2130981.html Jianli Wu personal home page:http://www.researchgate.net/profile/Jianli_Wu
References
1. Jie Chen;Yongfeng Shi;Wenzheng Liu;Rongyao Chai;Yaping Fu;Jieyun Zhuang;Jianli Wu
A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae Journal of genetics and genomics, 2011, 38(5): 209-216
2. Junjun Shang;Yong Tao;Xuewei Chen;Yan Zou;Cailin Lei;Jing Wang;Xiaobing Li;Xianfeng Zhao;Meijun Zhang;Zhike Lu;Jichen Xu;Zhukuan Cheng;Jianmin Wan;Lihuang Zhu
Identification of a New Rice Blast Resistance Gene, Pid3, by Genomewide Comparison of Paired Nucleotide-Binding Site–Leucine-Rich Repeat Genes and Their Pseudogene Alleles Between the Two Sequenced Rice Genomes Genetics, 2009, 182(4): 1303-1311
3. J.-L. Wu;Y.-Y. Fan;D.-B. Li;K.-L. Zheng;H. Leung and J.-Y. Zhuang
Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates Theoretical and Applied Genetics, 2005, 111(1): 50-56
4. 吴建利; 柴荣耀; 樊叶杨; 李德葆; 郑康乐; Hei LEUNG; 庄杰云
抗稻瘟病水稻材料谷梅2号中主效抗稻瘟病基因的成簇分布 中国水稻科学, 2004, 18(6): 567-569
5. Jie-Yun Zhuang;Wen-Bin Ma;Jian-Li Wu;Rong-Yao Chai;Jun Lu;Ye-Yang Fan;Min-Zhong Jin;Hei Leung & Kang-Le Zheng
Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and RFLP in rice Euphytica, 2002, 128(3): 363-370
6. Zhuang-J-Y, Wu-J-L, Fan-Y-Y, Rao-Z-M, Zheng-K-L
Genetic drag between a blast resistance gene and QTL conditioning yield trait detected in a recombinant inbred line population in rice Rice Genetics Newsletters, 2001, 18(0): 69-70
7. 吴建利; 庄杰云; 柴荣耀; 樊叶杨; 金敏忠; 李德葆; 郑康乐
水稻抗穗瘟基因的分子定位 植物病理学报, 2000, 30(2): 111-115
8. Wu-J-L, Zhuang-J-Y, Fan-Y-Y, Li-D-B, Leung-H, Zheng-K-L
Effectiveness of a resistance gene from Gumei 2 against leaf and neck blast under field conditions in China Rice Genetics Newsletters, 1999, 16(0): 90-92
9. Zhuang-J-Y;Wu-J-L;Chai-R-Y;Fan-Y-Y;Jin-M-Z;Leung-H;Zheng-K-L
Rapid identification of resistance gene analogs linked to two blast resistance genes in rice Rice Genetics Newsletters, 1998, 15(): 125-127
10. Zhuang-J Y, Chai-R Y, Ma-W, B Lu-J, Jin-M Z, Zheng-K-L
Genetic analysis of the blast resistance at vegetative and reproductive stages in rice Rice Genetics Newsletters, 1997, 14(0): 62-64
Structured Information
| Gene Name |
Os06g0330100 |
|---|---|
| Description |
Disease resistance protein family protein |
| Version |
NM_001064074.2 GI:297605748 GeneID:4340920 |
| Length |
2775 bp |
| Definition |
Oryza sativa Japonica Group Os06g0330100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:13123254..13126028 |
| Sequence Coding Region |
13123254..13123817,13123893..13126028 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:13123254..13126028 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:13123254..13126028 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIR EVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDGRM GMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSN WRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNA IKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSY LENKRYVLVLDDVWNANVWFDSKDAFEDGNIGRIILTSRNYDVALLAHETHIINLQPL EKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTY SDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRV LALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPN VSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGLFNLRFLGLRRTKISKLPSSIGRLK ILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTT LQTLLLMEASSQMVHHLGSLVELRTFRISKADSSQEVLHLESLKPPPLLQKLFLQGTL SHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFH ENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEEL TLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ</aaseq> |
| Gene Sequence |
<dnaseqindica>2212..2775#1..2136#atggcggagggtgttgtgggctcactaatcgtcaagcttggggatgccctggcgagtgaagcagtggaggtcgccaagtccttgcttgggctagagggatctgctctgaagcgcctcttttctgagatccgggaggtgaagggggagctggagagcatccatgccttcttgcaggcagccgagcggttcaaggacgccgacgagacaacctccgcgttcgtcaagcaggtgaggagcctcgccctgagcatcgaggacgtagtcgatgagttcacctacgagctgggggaaggagacggccggatggggatggcagtggcactcaagaggatgtgcaagatgggcacatggtctcgcctggctggcaatctgcaggacatcaaggtcaacctgaaaaacgctgccgagaggaggattaggtatgatctgaagggcgtcgagagaggcgcgaaatcgatggcgggaaggaggagctcaaactggagatctgactctgtactcttcaagagggaggatgagcttgttggtatcgagaagaagagggatttgctgatgaaatgggtgaaagatgaggagcagcgccgcatggtggtcagtgtgtggggaatgagtggaatcggcaagacggcactggttgctaatgtttacaatgctatcaaggctgactttgacacctgtgcttggatcactgtgtctcagagctacgaggctgacgatttgcttaggcgaactgctcaagagtttcgcaagaatgatcggaagaaagacttcccaattgacgttgatatcacaaattacagaggcttggtcgaaaccacccgctcttacctggagaacaaaaggtatgtccttgtcctagatgatgtatggaatgcaaatgtttggttcgatagcaaagatgcatttgaagatggcaatattggccgaataattcttacatcaaggaattatgatgtggcgttacttgcgcatgaaacccatataattaatttgcagccgttggagaaacaccatgcgtgggatctgttctgtaaagaggcattttggaagaatgagataaggaattgtccgccggagttgcagccctgggctaataattttgttgacaagtgcaatggcttgccaatcgcaattgtgtgcattggacgccttctgtcatttcaagggtcaacttattcagactgggaaaaggtgtacaaaaatcttgagatgcaactaacaaacaactctatcatggacatgatgaacattatcttgaagattagtttggaagatctaccgcacaacattaagaactgcttcctttattgctccatgtttcctgaaaattatgtgatgaagaggaagtccctagtacgactctgggttgctgaaggatttattgaagaaactgagcatagaacacttgaggaagtggcagagcattacttgactgaacttgtgaaccgatgtcttctgttgctggtgaagagaaatgaggctggacatgttcatgaagtccaaatgcacgatatcctccgtgttttggctctttccaaggctcatgaacaaaatttttgcattgtcgttaaccactcgaggagtacacatcttattggagaagcacgccgtttatcaattcagagaggggattttgcacaacttgcagaccatgcaccacatcttcgatccttgctgcttttccaaagttcacccaatgtcagttcgcttcagtcattaccaaagtctatgaagttgttgtctgttttggatctaactgatagttcagttgataggctgccaaaggaagtgtttggcttgttcaacttgcgttttctgggtctcaggcgtactaaaatctccaagcttccaagctccattggaaggctaaaaattctgctggtgttggacgcttggaagtgtaaaattgtaaagcttccattggcgattacaaaacttcaaaagctaacacatcttattgtaacttcgaaagcagtcgttgtttctaagcaatttgttccttcttttgatgtgccagcacctttgcgtatctgctccatgacaacccttcagacattactactcatggaagctagttctcaaatggttcatcacctaggctctcttgtggagttaagaacctttcgtatcagcaaggtgcgaagttgccattgtgagcagttgttcatggccatcactaatatgattcatcttacccgtcttgggatctaggcagacagtagtcaagaagtgctgcatcttgaatcacttaaacctcctcctctacttcagaaacttttcttgcaaggtacattatctcatgaatcattacctcatttcgtgtctgtaagcaatctgaataacctcacgtttctacgtcttgctgggtcaagaattgacgaaaatgcattccttaatcttgagggattacagcagttggtaaagctacagctttatgatgcatatgatggaatgaatatatacttccatgagaactcatttccaaagctcagaatactgaaaatatggggtgccccacacctgaatgaaattaagatgacaaaaggagctgtggcaagcctaacagatctgaagttcctgctctgtccaaacctgaagcagttgccttgcggtattgaacatgtgaggactcttgaggagctcactctggatcatacagcagaagagcttgtggatagaatccgacagaaaaaagagcgaatgatttgtgacgtccagagagtttatgttgggttcatcagaaatggtgtgttggctgcagaaaggattcaataa</dnaseqindica> |
| External Link(s) |
