Difference between revisions of "Os07g0186200"
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===Expression=== | ===Expression=== | ||
Please input expression information here. | Please input expression information here. | ||
| + | OsSIK2 is expressed mainly in rice leaf and sheath and can be induced by NaCl, drought, cold, dark, and abscisic acid treatment. Transgenic plants overexpressing OsSIK2 and mutant sik2 exhibit enhanced and reduced tolerance to salt and drought stress, respectively, compared with the controls. | ||
===Evolution=== | ===Evolution=== | ||
Revision as of 12:49, 21 May 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here. OsSIK2 is expressed mainly in rice leaf and sheath and can be induced by NaCl, drought, cold, dark, and abscisic acid treatment. Transgenic plants overexpressing OsSIK2 and mutant sik2 exhibit enhanced and reduced tolerance to salt and drought stress, respectively, compared with the controls.
Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
Please input cited references here. An S-Domain Receptor-Like Kinase, OsSIK2, Confers Abiotic Stress Tolerance and Delays Dark-Induced Leaf Senescence in Rice Li-Juan Chen, Hada Wuriyanghan, Yu-Qin Zhang, Kai-Xuan Duan, Hao-Wei Chen, Qing-Tian Li, Xiang Lu, Si-Jie He, Biao Ma, Wan-Ke Zhang, Qing Lin, Shou-Yi Chen, Jin-Song Zhang Plant Physiology, 2013, 163(4): 1752-1765 DOI: 10.1104/pp.113.224881
Structured Information
| Gene Name |
Os07g0186200 |
|---|---|
| Description |
Curculin-like (mannose-binding) lectin domain containing protein |
| Version |
NM_001065605.2 GI:297606835 GeneID:4342594 |
| Length |
2514 bp |
| Definition |
Oryza sativa Japonica Group Os07g0186200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:4625246..4627759 |
| Sequence Coding Region |
4625246..4627759 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:4625246..4627759 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:4625246..4627759 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccacctcctctctatgtcttgctactactcagtgggcttctcctctcctccctgcacactcctccatgttccgccgccattgcagatggcgacactctcatggtaggccaagcgctttctgtcggcgagaagctcgtctcgaggaacggcaagttcgcgctcggcttcttccagccacaaccaactgcaggcatcagtaagtccattaacaccaccaccaacacattgcctggctggtatcttggcatatggttcaacaagatccaggtttttactacagcttgggttgctaatagggagaatcccatcactggccctgagctgaagcaagcacagctcaaaatctcaagagatggcaatcttgccatcgtcttgaacaacaacaacaccagttcagagtccataatctggtccagcactcacaccattgtcaataggacaacaggatcatccagcacaaacaccagtgctctcctcatgaacaatggaaacctactcctcatggctagtagcaatgttgtgttgtggcagagcttcgactaccctgcagatgttgggcttccgggtgctaagttaggtaggaacaagatcaccggtttgaaccgtcggttcgttgccaagaagagcctcattgatatgggcctcggctcttacatccttgagatggacacaaacacggtgttgcgccttaggcgtcgcaaacctcccgtcgtggtgtattggtcttggtcatccggacaattggcgtatacgcttgtaccattgctcaatgagctgctagacatggatccacggaccaaaggcttgctcaaacctgcatatgtccacaacaatgaggaggagtacttcacgtacacctcccttgatgaatcggcttctgtattcgtttccatagacatcactggtcaggttaagctgaatgtttggtcacaacccaaaatgtcttggcaaaccatatatgcagaaccatctgatccatgcagcctgcacgatgtctgtggacctttcacggtctgcaatggcaattcagtcccattctgtggatgtatggagagcttctctcccaagtcaccgcaggattgggatgccggtgatccgattggagggtgcatcagagatactcccttagattgtgcatctggtaaacaaaacaacacaagttcaacagacatgttccaccccatagctcctgttacactgcccttgtaccctcaaagcatggaagatgcttcgacccagagcgattgcgaagaagcttgtcttcatgactgcgcttgcactgcttatacctataatggtaacagatgctctatctggcatggggaattgcgaagtgtgaatcagaatgatggcattgataatcattctgaaaatgttctttaccttcgcctcgccgccagagattcacaaagtttaaggaagaacaacaaacggagaccaagagttgttgccattgtaagcattgtcgttagttttggattactaatgctcatgcttttgttaacgatttggattaacaaatccaagtggtgtggtgtgccattatatggcagtcaaggtaatgatggtggaattatagcctttagatacaccggtttagttcgtgctactaaatgtttctcagagaagctaggaggaggtggttttggttctgtattcaagggaatgttgggagaccagactgctatagcagtgaaaaggcttgatggtgctcgtcagggagagaagcaattcagggcagaagtgagctcaattggaatgacccaacatatcaacctaatcaaactgattggtttctgctgcgaaggtgataagaggctacttgtgtatgaacgcatgttaaatgggtctcttgacgcccatctatttcagagcaatgctaccgttctaaattggagcaccaggtatcaaatagctataggagttgctagaggattgtgctacctgcaccagagttgtcgcgaatgcatcatacactgtgatattaaaccagaaaacatacttctgaatgaatcatttgttcctaagattgcagattttgggatggcagcgattgtaggaagggattttagccgagttctaactacattcagaggtactgtagggtatcttgccccagagtggcttagcggagttgctattacaccaaaagttgatgtttacagctttggcatggtactattggaaatcatatcaggaaggagaaattcacctaaagtatctgctagcaacagctatcatggtgcttattttcctgtgcgagcaattaacaagcttcatgtgggagatgtgcatagtttgatggatccacgattacatgacgacttcagtttggaagaggctgaaagagtttgcaaagttgcatgttggtgcatccaagaaattgagtctgatcggccgacaatgggtgaagtggtccgggccattgagggtctacatgagcttgatatgcccccgatgccaagactacttgcagctataatagaacactctgatgtggcttcaatataa</cdnaseq> |
| Protein Sequence |
<aaseq>MPPPLYVLLLLSGLLLSSLHTPPCSAAIADGDTLMVGQALSVGE KLVSRNGKFALGFFQPQPTAGISKSINTTTNTLPGWYLGIWFNKIQVFTTAWVANREN PITGPELKQAQLKISRDGNLAIVLNNNNTSSESIIWSSTHTIVNRTTGSSSTNTSALL MNNGNLLLMASSNVVLWQSFDYPADVGLPGAKLGRNKITGLNRRFVAKKSLIDMGLGS YILEMDTNTVLRLRRRKPPVVVYWSWSSGQLAYTLVPLLNELLDMDPRTKGLLKPAYV HNNEEEYFTYTSLDESASVFVSIDITGQVKLNVWSQPKMSWQTIYAEPSDPCSLHDVC GPFTVCNGNSVPFCGCMESFSPKSPQDWDAGDPIGGCIRDTPLDCASGKQNNTSSTDM FHPIAPVTLPLYPQSMEDASTQSDCEEACLHDCACTAYTYNGNRCSIWHGELRSVNQN DGIDNHSENVLYLRLAARDSQSLRKNNKRRPRVVAIVSIVVSFGLLMLMLLLTIWINK SKWCGVPLYGSQGNDGGIIAFRYTGLVRATKCFSEKLGGGGFGSVFKGMLGDQTAIAV KRLDGARQGEKQFRAEVSSIGMTQHINLIKLIGFCCEGDKRLLVYERMLNGSLDAHLF QSNATVLNWSTRYQIAIGVARGLCYLHQSCRECIIHCDIKPENILLNESFVPKIADFG MAAIVGRDFSRVLTTFRGTVGYLAPEWLSGVAITPKVDVYSFGMVLLEIISGRRNSPK VSASNSYHGAYFPVRAINKLHVGDVHSLMDPRLHDDFSLEEAERVCKVACWCIQEIES DRPTMGEVVRAIEGLHELDMPPMPRLLAAIIEHSDVASI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..2514#atgccacctcctctctatgtcttgctactactcagtgggcttctcctctcctccctgcacactcctccatgttccgccgccattgcagatggcgacactctcatggtaggccaagcgctttctgtcggcgagaagctcgtctcgaggaacggcaagttcgcgctcggcttcttccagccacaaccaactgcaggcatcagtaagtccattaacaccaccaccaacacattgcctggctggtatcttggcatatggttcaacaagatccaggtttttactacagcttgggttgctaatagggagaatcccatcactggccctgagctgaagcaagcacagctcaaaatctcaagagatggcaatcttgccatcgtcttgaacaacaacaacaccagttcagagtccataatctggtccagcactcacaccattgtcaataggacaacaggatcatccagcacaaacaccagtgctctcctcatgaacaatggaaacctactcctcatggctagtagcaatgttgtgttgtggcagagcttcgactaccctgcagatgttgggcttccgggtgctaagttaggtaggaacaagatcaccggtttgaaccgtcggttcgttgccaagaagagcctcattgatatgggcctcggctcttacatccttgagatggacacaaacacggtgttgcgccttaggcgtcgcaaacctcccgtcgtggtgtattggtcttggtcatccggacaattggcgtatacgcttgtaccattgctcaatgagctgctagacatggatccacggaccaaaggcttgctcaaacctgcatatgtccacaacaatgaggaggagtacttcacgtacacctcccttgatgaatcggcttctgtattcgtttccatagacatcactggtcaggttaagctgaatgtttggtcacaacccaaaatgtcttggcaaaccatatatgcagaaccatctgatccatgcagcctgcacgatgtctgtggacctttcacggtctgcaatggcaattcagtcccattctgtggatgtatggagagcttctctcccaagtcaccgcaggattgggatgccggtgatccgattggagggtgcatcagagatactcccttagattgtgcatctggtaaacaaaacaacacaagttcaacagacatgttccaccccatagctcctgttacactgcccttgtaccctcaaagcatggaagatgcttcgacccagagcgattgcgaagaagcttgtcttcatgactgcgcttgcactgcttatacctataatggtaacagatgctctatctggcatggggaattgcgaagtgtgaatcagaatgatggcattgataatcattctgaaaatgttctttaccttcgcctcgccgccagagattcacaaagtttaaggaagaacaacaaacggagaccaagagttgttgccattgtaagcattgtcgttagttttggattactaatgctcatgcttttgttaacgatttggattaacaaatccaagtggtgtggtgtgccattatatggcagtcaaggtaatgatggtggaattatagcctttagatacaccggtttagttcgtgctactaaatgtttctcagagaagctaggaggaggtggttttggttctgtattcaagggaatgttgggagaccagactgctatagcagtgaaaaggcttgatggtgctcgtcagggagagaagcaattcagggcagaagtgagctcaattggaatgacccaacatatcaacctaatcaaactgattggtttctgctgcgaaggtgataagaggctacttgtgtatgaacgcatgttaaatgggtctcttgacgcccatctatttcagagcaatgctaccgttctaaattggagcaccaggtatcaaatagctataggagttgctagaggattgtgctacctgcaccagagttgtcgcgaatgcatcatacactgtgatattaaaccagaaaacatacttctgaatgaatcatttgttcctaagattgcagattttgggatggcagcgattgtaggaagggattttagccgagttctaactacattcagaggtactgtagggtatcttgccccagagtggcttagcggagttgctattacaccaaaagttgatgtttacagctttggcatggtactattggaaatcatatcaggaaggagaaattcacctaaagtatctgctagcaacagctatcatggtgcttattttcctgtgcgagcaattaacaagcttcatgtgggagatgtgcatagtttgatggatccacgattacatgacgacttcagtttggaagaggctgaaagagtttgcaaagttgcatgttggtgcatccaagaaattgagtctgatcggccgacaatgggtgaagtggtccgggccattgagggtctacatgagcttgatatgcccccgatgccaagactacttgcagctataatagaacactctgatgtggcttcaatataa</dnaseqindica> |
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