Difference between revisions of "Os07g0622900"
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===Function=== | ===Function=== | ||
Please input function information here. | Please input function information here. | ||
| + | DEFECTIVE TAPETUM AND MEIOCYTES 1 (DTM1) encodes for an endoplasmic reticulum (ER) | ||
| + | It is a membrane protein that is present only in cereals. | ||
| + | It can controls the early stages of that development | ||
| + | It is plays important roles in the ER membrane during early tapetum development, functioning after MSP1 and before UDT1, and also in meiocyte development, after MEL1 and before PAIR1. | ||
===mutation=== | ===mutation=== | ||
Revision as of 12:45, 23 May 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here. DEFECTIVE TAPETUM AND MEIOCYTES 1 (DTM1) encodes for an endoplasmic reticulum (ER) It is a membrane protein that is present only in cereals. It can controls the early stages of that development It is plays important roles in the ER membrane during early tapetum development, functioning after MSP1 and before UDT1, and also in meiocyte development, after MEL1 and before PAIR1.
mutation
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Expression
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Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os07g0622900 |
|---|---|
| Description |
Conserved hypothetical protein |
| Version |
NM_001066853.1 GI:115473438 GeneID:4343951 |
| Length |
3879 bp |
| Definition |
Oryza sativa Japonica Group Os07g0622900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:26421944..26425822 |
| Sequence Coding Region |
26422354..26422441,26425319..26425569 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:26421944..26425822 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:26421944..26425822 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggagggacgagatgctgcggcggagcctggtggcgctagcggcggcggtggtggtgacgggggtggtgacggcgtcggtgcggaaggcggcggcgacgtacgggttcggaatcctggccatcgcgggcgtgctgctccccgactgggagttcttcgaccgcgactactcccagtggctcaccccgatgccggcctcccgccgcacggccgccgaagccgccgcggatcgcgagcacgacgtctggaaatttaagccctatcccctaaggatggctatgcttacgacaatctatgggtttggcctttacaagtggtggatgtacgtatctagctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGRDEMLRRSLVALAAAVVVTGVVTASVRKAAATYGFGILAIAG VLLPDWEFFDRDYSQWLTPMPASRRTAAEAAADREHDVWKFKPYPLRMAMLTTIYGFG LYKWWMYVSS</aaseq> |
| Gene Sequence |
<dnaseqindica>3382..3469#254..504#gcttggtgagccacccttcctactttgcccccaccaccgagcctccctgagcagtgaaaccgcggcgcgcggcgggcgtcggcgtcggcgtcggcggcggcggcgagggcgtagagatcgcgcgcgcgcgcgcgcggaggcgtagccgcggagtcgctctctcctcgtcctgcctcgcgactcggctccgcgaagcttcgaggaggaggaggaggaggaggagtacgacggggtgggagcggcggtgggtgggatggggagggacgagatgctgcggcggagcctggtggcgctagcggcggcggtggtggtgacgggggtggtgacggcgtcggtgcggaaggcggcggcgacgtacgggttcggaatcctggccatcgcgggcgtgctgctccccgactgggagttcttcgaccgcgactactcccagtggctcaccccgatgccggcctcccgccgcacggccgccgaagccgccgcggatcgcgagcacgacgtctggaagtaagccctcctccctcctcctccttcccctctcctgctccttctgtctttcggtttgctttgcctggagttggttggctggcgttcatggggggatcgggtgctagcggataggatatcgctgtattttacaatttgttgaggcaaatatcgcttgttttgggaaattttctgtgctagtttcgattttagagagcaaatttccgttcgctgatggccgaattgggttctcgacacggaaggacgaggaaattgatgcagtttcaggtttctcttgatcaataccaacttaccaattctagtgggtattggcaaaagttctgtctattttgttttctactactggattggtcatgcgtgttcttgatctctccgtgatttatcacttatcacgtcaaactgcgattgagaattataggattgatgatacagtgcctgattggagaaaggaaatcggatttgctctggacctctctgtacaaaacacggtctccagtatgcaacgccattttaatggacactggcaagccttaactagtttagttgcagaattatagggcagctggtgggtggtcctgatgcttttaatactgctatggaatgcaaagtttcactggcttattaactgtgttctttagggcagctggaagttggtttgtggttgtgccgcttctagcttttagaactctcgaattgagtaaaggaagtgtggaaaataagtagtaggagctgttgatgcttagcacaccagtggaattgtccgtgctttgagtaccggatttggtttatgaactggtatcacctttctggacaatttgcacttgcttttaattcttttctctctaatttatgcacttccagaggttgcttatcagcttgtcatttcccaaaggtggatggagaaaccagtttgtttgttgaagagaaaaaaaagggttctctacagtttgccctgagctctatgtgcatttgttttgctgaaaatggtcggaaacaaaagactggctggttttctagcgtttaggtgctaactcctgcccgtgtgagcccccctgggatgctgtagcaaagcgctagtgtagctgcgtagcgtgtgagggcaacttccagcctgcctcgagttccttagttagcaggttgttgcatgggatatgatcatatgcagttggaatctgcccgaaaatatattaagaggagcagtatgctaaattgtgatttaggaaggagctaacagagtttttggaatttaacctctccttttcctttacaattgtgatctggctgcctcatggtgccatcagcccatcacaccagttcggtgtaaaactgtagacacacctaaaattgaccggtgtccaaatctagctcctggattttgtacgtttgtgatggtgctgatgtgctcggtcctggcctcctagggcaggggagtgctgagactcagagaaacaagtgctaactcagatagtacattgttgataatttcgtgttaattagttttcctttttgacagatcgaagttggctgtcaatcgctacattttattgaactatcaattttatccaaatgagtatgtaccaggatttctatgaacagtgtagtttaatttgttgtttgactctggttttttgtttgatcattcaagcctgcatgtttgatcattttggtccaaaggttgtagatatagaagtcattctgatttagggtttagacttatcttttaatgtctggaaactgacttataaaatgaattgcgactgtttagttgtcaacttaacttggtagtgtttcattgcaagcagaatagcaattacttttgaacatttcaaaacttgtgcttttgttttatgttttctgttcggggttcaaattttggtccaagattgtagatatagaagtatatagaagtcattctgatttagggtttagacttatcttttaacgtcttgaaattgactcataaaatgaattacgactgtttagttgtcaacttaacttggtagcgtttcatcgcaagcagaatagcaattacctgtgaacatttcaaaccttgtgcttttgttttctgaaaagcttgttggtaagtgatagaaactggaaatcaaactctttttacttgcagtgttttggctttgacaagtagcaaatggcatatagcaattgagatcgacatttgaaaccacactaacctttggtttagtagattgcgtctgtggtgttttttccccaagttttgttttcagcaaaatacaatagggagtcttgtttctttcctgaagttagcttggagcactatatattactccactttatctgtccgttcttattctatttgtttctacgaccacctgtgcattttctaactgaggtatttgtaccccacacatatactagtgctcatgttttaaccagtgacctgctgcaaatacctaataatgcattagatccagtagtggactagtggcagtcagaaggttttataattttgaattgcctcataatttttgcgataaattcacttcaatgtcttctatacataattcttggccataaatcctgacattgttaagacaattgccaagaaaccagctgtaaatctctcgctgagtggattgtagtaataaattctaaggtactaataacactgtaagttgccagatcacaacagactaccctggcagcactgccaaccgaactcacaagaatagcattttattggtgaagctgtctactcactgtacactttcctctaacaaaagcttcactatgcttagacagttaattccattgtcctagatcaactgctgatttagcttcatataactgtgctattaatcagaaaactgactgaccatgtttttatcttctcccctgcagatttaagccctatcccctaaggatggctatgcttacgacaatctatgggtttggcctttacaagtggtggatgtacgtatctagctagtggaatccaccttcctctccgcctttgctctcatgtatggattagaagtttttgggagagtaccatcatcacattgccattcttggccatttatattgcctgattttattatacactgccaatacgaaacgtctaatggggattggggaacagtccccatcacaggttgatgtctgtaactaatggaggtttgtaatgggcaaatgccactctcagctcagctcagctcaatattcctagccctattttcttcttcgtttttctcctctcctccccttgatctcagtagcgcgtcttgttttgatacagagagcactatgaaaatgttctttgcacagaatgaatggtttatctgatacagtagtctcatgttttatcagacactcttgttattcaccagtatatcgccc</dnaseqindica> |
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