Difference between revisions of "Os01g0136400"

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(Annotated Information)
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==Annotated Information==
 
==Annotated Information==
The expression product of Os01g0136400 is wall-associated kinase 1 (WAK1) which is a transmembrane protein containing a cytoplasmic Ser/Thr kinase domain and an extracellular domain in contact with the pectin fraction of the plant cell walls.
 
 
===Function===
 
===Function===
 
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Revision as of 20:27, 24 May 2014

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The expression product of Os01g0136400 is wall-associated kinase 1 (WAK1) which is a transmembrane protein containing a cytoplasmic Ser/Thr kinase domain and an extracellular domain in contact with the pectin fraction of the plant cell walls.

Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os01g0136400

Description

Protein kinase-like domain containing protein

Version

NM_001048492.1 GI:115434397 GeneID:4325700

Length

9605 bp

Definition

Oryza sativa Japonica Group Os01g0136400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1956847..1966451

Sequence Coding Region

1957104..1958041,1958213..1958467,1958587..1958619,1965545..1966325

Expression

GEO Profiles:Os01g0136400

Genome Context

<gbrowseImage1> name=NC_008394:1956847..1966451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1956847..1966451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacccgaccttgttgtgcttgccactcttggcctccttgctcctcctgtgccaccgcgcgcgcgccgagtgcgagccggcgacatgcggcaacctcaccgtcaggtacccattctggctaggcggccccaacttcaaccagtccaaccagtcgtcgccgtcgtcagctctggcctcctgtggccatccggctttcgaggtgtggtgtaacggcggcgtggcgtcgttgaggggctcgcaaatcctcgtcctcagcatcgactacaacagcagctcattcgtcgcggcacacaaaagggtcgccgacggcggcgacggcgtgtgccgcaccgacttcaacatatcgtccagcctagccctcagcccgttcacgatcagcagcagcaaccgggccatctgcttcctctacagctgcaacggcacggagccaccggagatcgacggccttgtgaacgccaccatctccagctgcagtaagcctatctacgcgtacctcggcgggatctacgaccgtgataatccaccggcgatcaaagccgggaactgcacgtactcgtacctgccggtgctgtggccggactcgccggcgaacttgacggcggggacaaactacagcccgcagttcaagaaggggttcgtgttggagtggcagaagaacgggttcggcgactgcgacgcctgtaacgggagcggcggtcagtgccggtacatcaacgattccgcggcggcgttcgcgtgcctctgctccgacggcaagctgcgccgctcgacatgccccggttcaagaagcaagagtcacataataggaatagcatgtggatcaagcggcggaatattattgattgtatctatattcatttttgcttggcacaaacgcaagaagaggaaacaaacccgagatttgaaagatctcatgcatagttcatcttcaatgcaatcatacagcaaagaccttgagttgggtggttctccccatatattcacttacgaggaacttgaagaggctactgctggatttagtgcctcgagggaacttggtgatggtggttttggaactgtttacaaaggaaagctccgggatgggagagtagttgcagtgaagcgcctttacaagaacaactacagacgagtagagcaattcctaaatgaggtagacattttgtcccgcctactgcaccagaaccttgttatcctatatggctgcacgtctcgttctagccgtgaccttctcttggtctatgagtacatcccaaatgggacagttgcagaccatctacatggaccccgtgcaggagaacgaggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcataccttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaacaacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacccatgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgctacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatttcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatggctctcaacagaattcagaaccatgaagttgatcagttggttgatccagagatcggctatgagactgacagtgaaacaaagaggatggtagatctggtggccgagctggcctttcagtgcttgcagatggacagagagagcaggccaccaattaaggaggtagtggaggtcctgaattgtatcaagaacggggaatgtccagcggaaaagatgaacaagaatgcgtctccaaaggaagattcgcatctgctgaaggacagcctacagtattcgcctgactcagtaatccatagatttcatagccaatctactaaccactcggtagcatcaaactctagcggatga</cdnaseq>

Protein Sequence

<aaseq>MHPTLLCLPLLASLLLLCHRARAECEPATCGNLTVRYPFWLGGP NFNQSNQSSPSSALASCGHPAFEVWCNGGVASLRGSQILVLSIDYNSSSFVAAHKRVA DGGDGVCRTDFNISSSLALSPFTISSSNRAICFLYSCNGTEPPEIDGLVNATISSCSK PIYAYLGGIYDRDNPPAIKAGNCTYSYLPVLWPDSPANLTAGTNYSPQFKKGFVLEWQ KNGFGDCDACNGSGGQCRYINDSAAAFACLCSDGKLRRSTCPGSRSKSHIIGIACGSS GGILLIVSIFIFAWHKRKKRKQTRDLKDLMHSSSSMQSYSKDLELGGSPHIFTYEELE EATAGFSASRELGDGGFGTVYKGKLRDGRVVAVKRLYKNNYRRVEQFLNEVDILSRLL HQNLVILYGCTSRSSRDLLLVYEYIPNGTVADHLHGPRAGERGLTWPVRMTIAIETAE ALAYLHAVEIIHRDVKTNNILLDNNFHVKVADFGLSRLFPLEVTHVSTVPQGTPGYVD PVYHQCYKLTDKSDVYSFGVVLIELISSKPAVDMSRSHSDINLANMALNRIQNHEVDQ LVDPEIGYETDSETKRMVDLVAELAFQCLQMDRESRPPIKEVVEVLNCIKNGECPAEK MNKNASPKEDSHLLKDSLQYSPDSVIHRFHSQSTNHSVASNSSG</aaseq>

Gene Sequence

<dnaseqindica>8411..9348#7985..8239#7833..7865#127..907#agtcaagaaaaacaaggcaatggcaatagcatttctcgagcattagaccttcccctccctttccagcattctgctgctctccaatccggcctccattgtgtagcagctagctccacgagcggcaagatgcacccgaccttgttgtgcttgccactcttggcctccttgctcctcctgtgccaccgcgcgcgcgccgagtgcgagccggcgacatgcggcaacctcaccgtcaggtacccattctggctaggcggccccaacttcaaccagtccaaccagtcgtcgccgtcgtcagctctggcctcctgtggccatccggctttcgaggtgtggtgtaacggcggcgtggcgtcgttgaggggctcgcaaatcctcgtcctcagcatcgactacaacagcagctcattcgtcgcggcacacaaaagggtcgccgacggcggcgacggcgtgtgccgcaccgacttcaacatatcgtccagcctagccctcagcccgttcacgatcagcagcagcaaccgggccatctgcttcctctacagctgcaacggcacggagccaccggagatcgacggccttgtgaacgccaccatctccagctgcagtaagcctatctacgcgtacctcggcgggatctacgaccgtgataatccaccggcgatcaaagccgggaactgcacgtactcgtacctgccggtgctgtggccggactcgccggcgaacttgacggcggggacaaactacagcccgcagttcaagaaggggttcgtgttggagtggcagaagaacgggttcggcgactgcgacgcctgtaacgggagcggcggtcagtgccggtacatcaacgattccgcggcggcgttcgcgtgcctctgctccgacggcaagctgcgccgctcgacatgccccggtgagtaccacacttgcctatcgcccaatctgacgcatgtgttagctagttgaagattttggctcggtgtacggttaactggacggccaaattggcgcgttgcgatcggtagccatgtactccgatcccaaagttgcaatctctcgtaggtcccatgtggatttggagttgaattactggcccacgtcaatgtccttggattttactcaacctctcgctcgctcgcggtctcgggtagttacatgggcggctggctagtcagctgcagagatggtggtaaattttgggagggtttgcctcggtggtgacgttgacgacgacttatcaagcaggctgcaggcaggagttgacatgggcggctagtcactggttcttccattgaccacccagcgtgattgattcttgggtaaacgcatgaattccgtcctttcctttgtctctgtctcccaacttcccagggcagagatccttctgatccttctgcttccccctcttctttttcccccgaaaattcaccattctcattagtgaactggttcattattaggacaaataagacgttagcagtagttgcctgaagcttcgagtgtgttgagctggtccataaactaatgctcatagtaggtgacaatgtaaatcattagtacatgatcaccaagtggcattctgcgtagaagtaccaaaatagtggggacagatgggcacgggctaaatttggcatcgtgcacggcgcaccagccgctaccaggggctttctttgaactgataaggctaacgggataagttacgctttatatctttcgaaagcggtcaatcggagttgttagaagtggcgggccatgaatttttggagccgaaagaagcgaatattaaggaaagacctaatatcaaataattagaagggttgatactttgaacccagatcgtctcgttcaccatcttgtggagctagccggaagaccctggacgtttctcaaatttttggagcccaacatatacgcagacataattggaaacacaatggaaagctcaacatataagacatcataatggtgcgatctattggcttcttaaccttagttactgctccctccggtacaaaaatcttgatgttttaaccttgtaaatggtgattgcgaattgttaatgcttctatcttagcatgttatattggaccgctttgccctacatgcttggaagtaaaaaccaagtaaaaaagctagggaattggacctttagctcgcaccgatacaggtgattaattcaaaccaacggcagcagtgtagtgattaccatgagtacaatactatatttaatatggtaaaatagtaaattgatactgtaatatggagtaaatcacttcttggtatgtgagatcatgttcaaaacatcaataattttgaaactggaaggagtacacactgcccttctcaacttttaaacgctactatttccaaaaagaaaactttaaaatgcaataaacagatatgaaaaactgttccctcaaaaaatatatgaaaaattcaaaacaggaaatgcggtagtgctagaaatatgaaattatgaactttaatcagtgtagtttgtattgaaattttaatacaatggggaatgaaagcttatataaaaataaaaaatatatagaaaatgcaaaacaatatactaccttggtgcccccattaacgatagtactagagattgccaccactaagctaattccggtctatgagtctatccaagtgcttttacataaaagagcattgtgagctttgctgataatgacatagatttcggcaaaatatggtaccaaatgctaatgcctttcctgcaaagattctgattctaggagttgatagatacctacataatttttaggcttacttttttttcaaaattactttccaaattgttgaaatgaattttgtgctctacgctcctaaaatatattttctcaaaaaaatattctattgtattgcacacttgttttaagttcatttattaaatgtttaatttataactacaatcaagtagataatctgtacaacaatccacttaataatccttagattgtgtttgagtgatgaaatgagaaaattaagaagatacaacaaacaagatgagtcattagcttatatgaattgagtattaactgttttaaatttgaaactatatgaattgagtattactttattatatttatctataaacatagttaaacatgagacagtttgactgaccaaaaatcaaaacaacttataatctaaaacggagggagtactggttagtggtaggaactagcaacgcagcacatatgtgttcaatctgcattaggtttttggttagagagaagatactagatattaacacgtttttatcagaaagtactccttctgtcctatattattaggttcagaaaaatgtatctacaagttctcataatattaggatatgtcaaattaggtaggtttttattaaacacatgaagtattctgtaggagtttttttttagttttagttacatccgtacaggtaagcgttgaccggttggaaagtggactagtctctgcttaccggcaagagtaggtgtggaacaaagggcgtagtagcctgttatacaacaggtagaaaacaatggtggacagcagcgtgcactagctagctggaagagggttaataggagtacacgacgatgagtccggacaaactggtccagtcacatcagggcggttataacagctagctgcccatagggcaccccggaaactcgcacgcgtggacgacgatcgttcgtgtatcaggtcaaacatttcgacacagaggaatagttcccgtgtgcaaagtttcttacttccatctcccccacaaacttccatctccttcagaaatcccctatccccctcctcctctttctgtctcgatgtccccgagcttcttctttgtcgtcgtctcggcctggtcgctagcgctgatgctcgccgcggcggcgaggggagccgaggaggaaggaggaggaggctgcctgggcagccagaaatgcggcgacctgaatatctcctctccgttctggatcatccagggccaggcggataagccgtgtggtcctctggattaccaggtatattgcaacaactccaccggcgtcgcaactcttcgaagctctacagacagcgggtttgatatcatcaacatatcatatggggaccgtactatgctcgtctttgatgtccataagctagctcgcctgaataactccaccggctgcagtatcccagtgtttaacaccttcgccaagctgcccatcacgtttacaatcagcccttccaatcacaacctcgtcttctacaactgcaccgaggcgccgccggcggagcagcagcaacaactggggctcgtggagacgagatgcggtaacaacacgtttgctcgcctgggagggcgtttccacggggagggcgactacgacaagtactatttggaaggctgcagcagaaacagcaccgtcttcttgccggtgctggaaccgcctgatggcaaggcgaacgccagcaggtatgtggagctcgtgggtggaggcttcctcataacatgggacctgccaccgccagtgacatcttctggtaagttcaccctccctgaaactattaggatcaagttcgtatagaaaatccactgtatatcctgatacttccgatctccaagcgagtactagtagaatacggttctcgctcatcagcgtgtaggacagggaatctgtcgattggctgatagggtcgtcatcttgcccaatcgtggcggctgggcaacagggatgagcaagaattaaactagaattaaagtgatcaaagcagtggaccatgaccgtcctttcgcattccatctcactccggtgccattccttccaatcttcgatcctgttctggtacatgactgagaagaccatgcacatctgttggaattggaaccgatacggcaagacgatgaggccgtagacagccattatccagtcaattttttcggccactacagagaattcccaaagttaaatgtatcgtactagaagaagaagtagcagtattaattctctcatgtcttcctcaatcctcatcaacaacacatcaccaattcatcctcttcgttttcgatgccctctccttccttgttcctcttgttcgcctgcctcgcctgggcgagtcaagcagcgaatacggcggcagacaatcgtccacaagaaggctgcgcggccagtactgtatgtggcaaggtgaccatctcgtcgccgttcgccgtcgtgccggagcaggcaacggagagcaaatgcggctggcttggattccaggttatctgccacaacgacactccatacctcggctactacaagcccagatatcggatccagatcctcgacatcttctacggcaacaattcattgctcgtctctgacatccacaagctcggtgacttcattgtcttctccggcgtcagcaaagaatactcctgccatgttccgaggaccaacacctcctccaaggtcggcctcccgttctccatcagcaccaccaatctcaacctcttcctgtacagttgcaataaggcgcttgtgccgcgggacggagacgacgacctcgtggagacgaggtgcggcaacaagacgtttgctcgcgtaggagggaattacagtgattcgggcgactacccggcgttttacatggaaggctgcaatgctaccgtcgtgccggtgctgggcacggacgcgaggagctatgagcagctcatccgcgacggcttcctcttgacatggcaagagacgccgtcatctggtaagttcgttcgcgaaattatccatttaatcatcactttcgggaggaggaaatgcgtaaaatttatggtgtcaactttatcgaatccgttaatcaatcagtgacttgtttattggttgataaggcagtcgtcatcgctaatccatctccgacctttggatatcgaaatcagagaaatatatgcaaaaactatactcccttcgtttcacgatgtaaatcattttagcgtttcttacgttaatattgatgttaattaatctagacatatatacctatctagatttattaacatcaatataaacgtgaaaaatactatagtgatgaaacggagaaaatagtacggagtacttcgtcaagaagctgtagcagcagagagagtagtagcaatgtagcagtatgttcaatccgtagactttgaccggtcaaaaccgcttcgccaccgtccttttgccccacgcctcatatcccatccctcgatctctcgtccccttcttctctctcatataatccatttcaccactgcattccgtagttgatttgcgtacccaagtccaccagatatgcctccgctcatactgctactgctggtagcttccttcctcgagttgccggcaccggcgagctcgtctagtcctggctgcttgcccacgccatgcggcaagctgaccatctcctacccgttctggctggaggagcccggccggccgccgtgcgggtcgccgcccttccagctcaagtgcaacgccaccggcgcatacctcacgcacaccatctacgaggcgtatcgcgttgttgatatcttcaccggaaaccacaccgtccatgtggtggacgagaatctcccgctcgccaccggctgcccggcgccgccgttcaacatctccgatggcatctggcaggcgccgttcgtcatcagcgaagccaacgcagagctgcgcttcctctcgtgtaacaagtcacttccggcggcggctgctcctcccggcttccatagcctgccttgtgatgaccaaaactcctccgtccggctcgtcagcgaccaccatttacacgaggatgggattccaccgggctgtaacttcacggttgtgccgatcgttcagcgtcacaatgggagtatggccggctatattgccagcatgaggagtgggtttctactagagtgggcggtggtttcaggggattgtcccaaatgtcaagtaagcggcgggaattgcacgtacagcgacgacctggagttcgcctgcaattgccccgacgggatgcaccctgacaagtgtagagagttcagaaaatcggaagagcacggtaaatttgtccagtcaattatcaattagaataaaaattttaacatagttctgtgaacatgcagcctaggccatcctaaccgattcaatgcatccaaagtgtgttcatctagttgatagttttctttatatatatagaaaagaatgacacatcatttcgttatacaggaagatttccatgctactgtggcctaatgtccactagataaactcttattataataatgcgcgtgacatctagttttgctatcgaggaaagaaattaaacacagcattgtcacagcaatgttcataagaatataaaatgcaaagtggatattgatatttttgttttgaattatgagtgtttgcttcaagttcctgctgttttggttgttagtttctcatcaaacaattatttcactgatgggaacattggcatttggcagcttatggaatcctagtcaaacgtgttacgtgtagtttgaagtattcaactacactatctgataaagatatcataccaataccatgttccaatttttcttctgctgattgctgactgacgaagaaatccctcatctgattgacagcaaataccctttcattttctaatccttaattagtgtgttccaaacatgtggaaagcataaattgcatctgtatttctgttgaattaggctgaaaagttgtataagcactgtccttcgtttcaacagggggttaggggagcaatgataccctaacaatgtgattatgaatgatcattctatttgttcatggcatatttgtgcaaggtattaaaagtctgttcttctgcaggttcaagaagcaagagtcacataataggaataggtgagtataattcattcttgtttcttggacttccccaaccattcaaaatgtaattatgaagatatgcttcagatccttggttctcacatattgatagtgctctgtctctgttattgcagcatgtggatcaagcggcggaatattattgattgtatctatattcatttttgcttggcacaaacgcaagaagaggaaacaaacccgagatttgaaagatctcatgcatagttcatcttcaatgcaatcatacagcaaagaccttgagttgggtggttctccccatatattcacttacgaggaacttgaagaggctactgctggatttagtgcctcgagggaacttggtgatggtggttttggaactgtttacaaaggtaggagaatatgtttgcacaactcccttgttgttaatagatttctcatctaatcacttcctcattagcatgcctaattgcatgcgacaggggctccgttgaactttgttccataatagataacttcccctattaacttagcagttacaattcttcctttctgccattcaggaaagctccgggatgggagagtagttgcagtgaagcgcctttacaagaacaactacagacgagtagagcaattcctaaatgaggtagacattttgtcccgcctactgcaccagaaccttgttatcctatatggctgcacgtctcgttctagccgtgaccttctcttggtctatgagtacatcccaaatgggacagttgcagaccatctacatggaccccgtgcaggagaacgaggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcataccttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaacaacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacccatgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgctacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatttcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatggctctcaacagaattcagaaccatgaagttgatcagttggttgatccagagatcggctatgagactgacagtgaaacaaagaggatggtagatctggtggccgagctggcctttcagtgcttgcagatggacagagagagcaggccaccaattaaggaggtagtggaggtcctgaattgtatcaagaacggggaatgtccagcggaaaagatgaacaagaatgcgtctccaaaggaagattcgcatctgctgaaggacagcctacagtattcgcctgactcagtaatccatagatttcatagccaatctactaaccactcggtagcatcaaactctagcggatgatgagaaactttgtattgattctgatgaaataaggataactaagttgtcccctcttggttgatggactaattaatactacaagtgtttgactatgagcttggcagaaattcagacaattggtgaatgcggtaggagaaatacagggttcaaacaatctcgtgtaatctagtgttcagtgtgttcatgatttcaggttagcgagtggtatcagggagaacacatcccattgttaccctaactagaggttgcaattttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0136400, RefSeq:Os01g0136400