Difference between revisions of "Os03g0793500"
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==Annotated Information== | ==Annotated Information== | ||
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Under long sunshine condition,Hd16 enhances its function by phosphorylation Ghd7 to down regulation Ehd1 and its downstream genes' transcription levels such as Hd3a and RFT1. At last, it lead to delay flowering.[1] | Under long sunshine condition,Hd16 enhances its function by phosphorylation Ghd7 to down regulation Ehd1 and its downstream genes' transcription levels such as Hd3a and RFT1. At last, it lead to delay flowering.[1] | ||
Revision as of 04:56, 28 May 2014
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Contents
Annotated Information
Function
Under long sunshine condition,Hd16 enhances its function by phosphorylation Ghd7 to down regulation Ehd1 and its downstream genes' transcription levels such as Hd3a and RFT1. At last, it lead to delay flowering.[1] EL1 is a key regulatory factors involved in GA response. SLR1, one of the DELLA proteins, negatively regulates of GA signaling through phosphorylation.[3] Furthermore, expression of homeotic EL1 is negatively regulated by the transcription factors of HOX1.[2]
Expression
Please input expression information here.
Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os03g0793500 |
|---|---|
| Description |
Similar to Casein kinase-like protein |
| Version |
NM_001058066.1 GI:115455860 GeneID:4334396 |
| Length |
7397 bp |
| Definition |
Oryza sativa Japonica Group Os03g0793500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:33850197..33857593 |
| Sequence Coding Region |
33851130..33851543,33852205..33852330,33852414..33852487,33852577..33852646,33852731..33852786 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:33850197..33857593 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:33850197..33857593 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccagagttgcggggtggtgtttggagagctcgtctgaggtccaagaaggtttacgacgtccaggacgcagatccagctgcgagtccggtgtcgccagctccgcgggggaggactggaaggcgcggcggtgctgcggctggcagaggcaacaagacagttgctgagggaggagggaggaaagctctgaagcctagaggaaaggggtgcagggctgttgatttgtgtaaggatcaaccttgcaaggacctccctgaagttattgctagaaaggcggttaccggcaaagcccaggaggaccttggtttgaacaaggtagctgacagagctgcgaacttgatgatggacggcgaaagtggagacaaatttgctgcggcagaagatgaatccactacaacaccagttcctgagcgggttcaagtaggcaattccccagagtatataactgataggaagttgggtaaaggtggatttggtcaggtctatgttggtcgaagagtatctggtggaggttctcgcacgggtccagatgcgcaagaggttgcgcttaaatttgagcaccgaagcagtaaaggatgtaactatggccctccatacgagtggcaggtttaccacactctcaatggttgttatggcataccatcagtccactataagggtcgtttgggagactactacattcttgtaatggatatgcttggtcccagcctctgggatgtgtggaattcagtgggacaggcgatgtctgcccatatggttgcttgcattgctgtggaagcgatatcaattcttgagaagcttcactctaaagggtttgtacatggtgatgtcaaaccagagaattttttgcttggtcatcctgggtcagttgatgagaagaagcttttcctgattgatcttggtttagcatccaggtggaaagaagcatcatctggtcagcatgttgactatgatcagaggccagatgtctttaggggaacaattagatacgctagcgtccatgcccacttaggtcgtacaggtagcaggagggatgatttagagtcactggcttacaccctaatctttttaataagagggagattaccttggcaagggtatcagggagataacaagagttttcttgtttgtaagaagaaaatggctacttcaccagagttgctgtgttgcttctgtccagctccgttcaaacattttctagagatggtcactaacatgaaatttgacgaagagccaaactatccaaaacttatttctctctttgatggtttgattgaagggcctgcttcaaggcccatcagaattgatggagctctgaaggttgggcaaaaacgtggaagaatggttgtaaatcttgacgatgatgaacagcccaagaagaaagttaggttgggaagcccagcaactcaatggatctcagtttataatgctaggcggcccatgaagcagagatatcactataatgttgctgattcaaggctgcatcagcatatagaaaaaggcaatgaagatgggctgtacattagttgtgtctcttcttccgcaaatttttgggctctcataatggatgctgggactggcttttgttcccaagtttatgagctttcacaagtgtttctgcacaaggattggattatggagcagtgggagaagaattattacataacggcaatagcaggagcaaccaatggaagctcattggttgtaatgtccaaaggaactccatacacacagcagtcatacaaagtcagtgaatcctttccttacaagtggattaacaaaaagtggaaagaaggtttccatgtgacatctatggctactgctggaaaccgttggggagttgtcatgtcaagaaatgcaggctattcccatcaggtggtagagttggactttctatatccaagtgaagggatccatcggcgatgggagacaggttacagaataacttcgactgcagcaactcctgaccaagctgccttcatcttgagcataccaaagaggaagccaatggacgagacacaagaaactcttcgaacttcctcctttcccagcaaccatgtcaaggaaaaatggtcaaagaacctatacatcgcttcaatctgctacggccggaccgtatgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MPELRGGVWRARLRSKKVYDVQDADPAASPVSPAPRGRTGRRGG AAAGRGNKTVAEGGGRKALKPRGKGCRAVDLCKDQPCKDLPEVIARKAVTGKAQEDLG LNKVADRAANLMMDGESGDKFAAAEDESTTTPVPERVQVGNSPEYITDRKLGKGGFGQ VYVGRRVSGGGSRTGPDAQEVALKFEHRSSKGCNYGPPYEWQVYHTLNGCYGIPSVHY KGRLGDYYILVMDMLGPSLWDVWNSVGQAMSAHMVACIAVEAISILEKLHSKGFVHGD VKPENFLLGHPGSVDEKKLFLIDLGLASRWKEASSGQHVDYDQRPDVFRGTIRYASVH AHLGRTGSRRDDLESLAYTLIFLIRGRLPWQGYQGDNKSFLVCKKKMATSPELLCCFC PAPFKHFLEMVTNMKFDEEPNYPKLISLFDGLIEGPASRPIRIDGALKVGQKRGRMVV NLDDDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADSRLHQHIEKGNEDGLYI SCVSSSANFWALIMDAGTGFCSQVYELSQVFLHKDWIMEQWEKNYYITAIAGATNGSS LVVMSKGTPYTQQSYKVSESFPYKWINKKWKEGFHVTSMATAGNRWGVVMSRNAGYSH QVVELDFLYPSEGIHRRWETGYRITSTAATPDQAAFILSIPKRKPMDETQETLRTSSF PSNHVKEKWSKNLYIASICYGRTVC</aaseq> |
| Gene Sequence |
<dnaseqindica>934..1347#2009..2134#2218..2291#2381..2450#2535..2590#2675..2746#2858..2952#3109..3175#3272..3401#3491..3706#3800..3930#4632..4806#4890..4980#6064..6221#6676..6864#6979..7038#gcagcagccgcagcagcagcaaagcctccccccccaacccaccaccgcgacacgcacgcgagcgacgcgagcgctccacgatttctctgcctccccccccccctcggtctcctcctcccccaccaccaccgcacgcttcccgaggcgccgccctccgccgccgcgggcatccgcttccgacgacgatgtaagccgctcttctccgcgctctcgctctgtgttttttttttttttgggggggggggttgatcggtgggggcggttgcttgaggcgcgatcggattgcggggcggggtcgctgacgctggggggggagtgatccgatggggttgaggagggccgattcgggcgctggaaatgggttcggtttcgaggatagatgcttgcctcatggggagctttattgcggatttaggaaaaaaagcgtggtttgcgtgggattgggggatttgtggcgggttgggattagtttaggattggtttggtgttggattggtggtaatctggaggtaaaaggtgggagttttttttttcctttctgggtggagatcccctgcggggtatcgggtgatggagatgctcgggcttcttttagagcgccgatggcggcattcgattccgttgaaagggcagtggtggtagcaaagcgggctgcgtctttaagggggggggggggggggctcgcgatggcgatgaatgcctcagattgattccactccgatcttttcctattcccgattcattgcttgattgatttgccatgacatggtgaaggaacaatctttgagctgaaatttgtttatgtttgtgattgttgtgcctgctgtggtttccttcatcagtgatttattcttgttggatgtttttttttcatgcggagattggaaggagcaccgaagggtgtagcacaaggccgagttgcatggggcgataatgccagagttgcggggtggtgtttggagagctcgtctgaggtccaagaaggtttacgacgtccaggacgcagatccagctgcgagtccggtgtcgccagctccgcgggggaggactggaaggcgcggcggtgctgcggctggcagaggcaacaagacagttgctgagggaggagggaggaaagctctgaagcctagaggaaaggggtgcagggctgttgatttgtgtaaggatcaaccttgcaaggacctccctgaagttattgctagaaaggcggttaccggcaaagcccaggaggaccttggtttgaacaaggtagctgacagagctgcgaacttgatgatggacggcgaaagtggagacaaatttgctgcggcagaagatgaatccactacaacaccagttcctgagcgggtatggaataccttcttccctttgcacttctgtaggtgtactatcatttgtaccgataaagtcattttcttcaagttctttaacatgggatgtttcatcatttttgtttactttgtttggtagtttttgtatggttgctgttccagatgttcatgttacctttcacagatgacttctctgctgtattggtgttattagacacaagacaaccgacatgtctgtttcacataaaatatagtgtaaccaaatttagaagttataaagtataataattgatgatgattcatctgaattgtggcgtaagaaatggtttagttgttatgcttgagaggtgagtgcctatttgcttggcgaagctgagattgaggcactgaatggctggattatagtagttttgttttgtagaggaaacaaacttcagataatcacatagtatcacatcctgatatcacaaaaccgatgaaactccgtggcaagttcatcaaacaacaaagtttaggaatgggaaagttacaatctcttgctctttgacatcaaattttatcactaaaataggagtttgcttctcctggtgacatcttttatctacactttatgtggcagagtttcactgccattaattaacctcctaaaattctaaatagttatatatgttttacaggttcaagtaggcaattccccagagtatataactgataggaagttgggtaaaggtggatttggtcaggtctatgttggtcgaagagtatctggtggaggttctcgcacgggtccagatgcgcaagaggtttcatttcttaccacctcaattggacactgaagctctgttagtttagttagtttttagatatctgaatgaatatcctgtaggttgcgcttaaatttgagcaccgaagcagtaaaggatgtaactatggccctccatacgagtggcaggtttaccagtaagaatttcacacaatctatcccttctgatgtttatgttgttctatgtggagtatgatccattaaccttttgtccttttgtaaatagcactctcaatggttgttatggcataccatcagtccactataagggtcgtttgggagactactacattcttgtgcgtttaccttagtcatgtattgaaaaatgtttctggactcaaaataaattattttattcaaccatcacaccaaaatttcaggtaatggatatgcttggtcccagcctctgggatgtgtggaattcagtgggacaggcgtaagtttcggatcacctttttgcattgaccacctgattttattactcctcactgaaaataacagcattggaacttgcaaacaggatgtctgcccatatggttgcttgcattgctgtggaagcgatatcaattcttgagaagcttcactctaaagggtaaaatttaaagtcacttgtgcctgaaaattatatggagctgcatggaatttctcttttgttttctatttcattggtgttaacatttccagtgcatcttatcattgccaggtttgtacatggtgatgtcaaaccagagaattttttgcttggtcatcctgggtcagttgatgagaagaagcttttcctgattgatcttggtttaggtaggcttttgttcaaagtagtctcatctgtgtatgaagtattcaatttagttctcaatgtgctatggcatttgctcttatgcattttgtacttgaatcccaaggaattgttgccctgttgatttatttttatttcgtgatgttgaaatcatgcagcatccaggtggaaagaagcatcatctggtcagcatgttgactatgatcagaggccagatgtctttaggttcgtccatttttgtgtgtgcactataatatctttttctctgtattaaattatgggcaattattaacttacctttttcttttcgacattttacaggggaacaattagatacgctagcgtccatgcccacttaggtcgtacaggtagcaggagggatgatttagagtcactggcttacaccctaatctttttaataagagggagattaccttggcaagggtatcaggtagcctttaatatgctcagcaaagttttgacataatgttttcttctatttgttgaacttattttagtgttaatgggatggtaatgcagggagataacaagagttttcttgtttgtaagaagaaaatggctacttcaccagagttgctgtgttgcttctgtccagctccgttcaaacattttctagagatggtcactaacatgaaatttgacgaagagccaaactatccaaaacttatttctctctttgatggtttgattgaagggcctgcttcaaggcccatcagaattgatggagctctgaaggtatgtaaatgttgtacacacaacctgtgtctgtaccatacagattaacttgaatgcgttaaattttctcatgtatatttttgcatattataggttgggcaaaaacgtggaagaatggttgtaaatcttgacgatgatgaacagcccaagaagaaagttaggttgggaagcccagcaactcaatggatctcagtttataatgctaggcggcccatgaagcagaggtaatgccctaaaaactgaaaatggtgcaaagtctctgtgtctgttatttattttcccaaacattgtcctcgcaatgcacttgcctttaagtgtggacgcacttgcctttaagtgtggactgagcacataacacgatgctatccagttgccaccagacactttacaactggtctgttctgtttccctgatgtcaggatctcataaggcttcttatcactatgatattacgcaaactgcttttgagttatctccgatacattttattgttctaactacattttatatgtctccaaatttgctgggttaagcaagagttcagtgactaactctgtcttgattgatgttgtcactggggatagttcctgtatgcgcctagtgtcatccattttagcatggacttaactttacctgattcctggcaaaagcagcgatgtgaaaatatcatccatggcgttagctgaacccttcatgctagttttagtgatggaagtgtttgtgtgtgtgtgcgtgcccctgcatgcccatgcttattacaatttcagccttcatagctcttatttctttggcctccttgttctagaatttgagtttttgaagtcaacctagttctcagctattaatccatatatttatcctctttaaaaattaaatatgatatatattgacgtggctgcaaaatgcatcacttctttctttacagatatcactataatgttgctgattcaaggctgcatcagcatatagaaaaaggcaatgaagatgggctgtacattagttgtgtctcttcttccgcaaatttttgggctctcataatggatgctgggactggcttttgttcccaagtttatgagctttcacaagtgtttctgcacaaggtgcactggctatttctccaccccttccatccagttttgatgaatccagagtcctgactccatattaccttgtttgtacataggattggattatggagcagtgggagaagaattattacataacggcaatagcaggagcaaccaatggaagctcattggttgtaatgtccaaaggttggtaaaataccttttctctgctggcaaactaattttactaccttggctatttcttagaacttgaaacaaccccgttgatgaatatgaaatagttgaaacagtcagttgctttaagacagttttcagcagaacctcttgtgcagcaagggtatgtgccttgcatactagactgattgaaacatgagtgtgttgaaggcataacctgcaacaacttcataggttaaaatgatttgtgtagactgtagagtgtgatcctttttatttggggggacagccaccagtattgcctgctcaattgctcggcaagtagcaataattttcgtttcattgtgtaaaggacgaacaatcagatggttcctgttaaaactgtgatggttaacagtaggtttgtaagtaggcatttcgtccatgctctcatcagtccatggcagcttgaggcagaatttatttagagggtgccacaagttcataacatgaatggcagacagacatacataatctgtctctataatacacaaatatctatgaactaatatttggtttggccagttttgatcaaaaagttgatggatcaattttgttaccagttttcctttgcttcaacacttaaatttaagagtaaatttcacaaaactacagatatattgaccaaactatcacaaaactgcagatttaacaccaaatttatcacaaaactacaggtctaaggtggagtctcacaaaactttagatttagtaacaaagttttcacaaaactacaggtttagcgtcaatttaatcacaaaacttggacgttttatgactcaaacataacattagtgctaaggatttaaaccccaaaaattgtagttttgtgataattttataaatgtgtagttttgtggtacttagccttagacctgtaaccttaaatctgtagttttgcattaatttggtcaaagtatctgtacttttgtgaaatttactctttaattttgtatttctactctcaactgtctggactccaatttttcctgtgagcttctggtgtccttccattagatactatcgttctaaaccaggcatgtatcatcattacaggaactccatacacacagcagtcatacaaagtcagtgaatcctttccttacaagtggattaacaaaaagtggaaagaaggtttccatgtgacatctatggctactgctggaaaccgttggggagttgtcatgtcaagaaatgcaggctattcccatcaggttaaaagatttcgatttaccaatccttgtgttcattctttctatgaatttggtggcttctcatatgccaaataacctgtacgtgataaaaaatggtatatacaccttgattggtaaagaatatccaacgataagttactgtcgataggctaacctcaaaaccatcagtttaagtgttgcgtgcggaaactacctaactccaaacttttgttgctgtaaggatgtcatcttgtttgtggttgaattcgaacattcaactggtagaatgcttgatgtaccaatcagttgagtttgtgctctttacagctgttaaccaaaaaagcagggaaatacagtaaccacacatgtttctattctgaattttcttacatattatcttgatgttcagactcctgagttgatcactgcttcatagtgagtaagtctgaaactgaatccgtctcgcaatgtgcaggtggtagagttggactttctatatccaagtgaagggatccatcggcgatgggagacaggttacagaataacttcgactgcagcaactcctgaccaagctgccttcatcttgagcataccaaagaggaagccaatggacgagacacaagaaactcttcgaacttcctcctttcccagcaaccatgtcaaggtacatacatcttcagctctcccaacctcacaatgccatacaaaatcttatgatgcgtcgaactttttttgacggaaatgatgcgtcgaactaacattgctgttaaaatctcaggaaaaatggtcaaagaacctatacatcgcttcaatctgctacggccggaccgtatgctgacagcttcaacatttcgaagctccaatgtgaagccatgtctagctactactagcattttgcagtgagctgccaaccgatcaaatctcccttgattgggagatctgaagcaaggaaaaaaaaaagaaacaaatcaatggctgacatcaccggcctcttgcagccatctattctaactgtaaaaattgaaaaaaaaaatcatggcaaatgttgtaccagatcggatatggagacctttgtccataagctaagctagtataagctgcatggcggtgctaagatcatattgttctcacatacggagtatatatatatcatactactctctctgtttcagattataagatattttgactttggcc</dnaseqindica> 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