Difference between revisions of "Os11g0249000"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | NLS1 displays spontaneous lesions, specifically on leaf sheaths, with a developmental pattern. nls1-1D plants also | |
| − | displays spontaneous lesions, specifically on leaf sheaths, with a developmental pattern. nls1-1D plants also | ||
exhibited constitutively activated defense responses, including extensive cell death, excess hydrogen peroxide | exhibited constitutively activated defense responses, including extensive cell death, excess hydrogen peroxide | ||
and salicylic acid (SA) accumulation, up-regulated expressions of pathogenesis-related genes, and enhanced | and salicylic acid (SA) accumulation, up-regulated expressions of pathogenesis-related genes, and enhanced | ||
Revision as of 02:43, 1 June 2014
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Contents
Annotated Information
Function
NLS1 displays spontaneous lesions, specifically on leaf sheaths, with a developmental pattern. nls1-1D plants also exhibited constitutively activated defense responses, including extensive cell death, excess hydrogen peroxide and salicylic acid (SA) accumulation, up-regulated expressions of pathogenesis-related genes, and enhanced resistance to bacterial pathogens.
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os11g0249000 |
|---|---|
| Description |
Disease resistance protein family protein |
| Version |
NM_001074150.1 GI:115484948 GeneID:4350204 |
| Length |
5550 bp |
| Definition |
Oryza sativa Japonica Group Os11g0249000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:8074465..8080014 |
| Sequence Coding Region |
8074504..8075291,8077897..8079865 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:8074465..8080014 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:8074465..8080014 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaagcagcgatagtgagtgcttcgacgggagtgatgcgttccctcctcgccaagctcacaaaccttcttggtggtgagtacaagctacttaagtggctccgtagggagatggagttcctcgagagcgagctccgtagcatgagcatcttcttggagaggttggaggacacgcaaaagcttcacccccaaatgaaggattggagggatcgagtacgcgagttggcatacgacattgaggattgcatcgacgacttcatactacagcttgattccaaggatgcgaaggttgggtttgggcaaaagcttcttgcatcccgtaggattggccacatgattcgagaactcaaggcgcgtgtaatggaggagagtgagagacaaaggaggtacatgcttgatggcttggcatctgggcctagtgttcgtgtgaaggttgatccacggctatcggctctctatgtcgacgaggacagattagttggtattgatgccccgagagatgagatcattgggcggctgttggacaagcggagaagtgcctcagcaaaacaggtcatgacaatttccatcgtgggttgcggaggattggggaagaccacccttgccaatcaaatttactgcaaaatcaaaggaaaatttgagtgcgcagcttttgcgtcagtgttccaaaatcccaacaccaagaaggttttgacgaatattctttcccaagtggccactactgctgctgtggaagacgatgagcaagccatcatcaacaagctaagggaataccttagtgacaagaggtacattgtcatagttgatgatatatgggatatgcaaatatggaaatttattgaatgtgcgttggtcaagaactgccgtggtagcagaattatcacaacaacacgtatacatgatattgctaaattgtgctgttcatctcatggcgattatatttacgaaatgaagcctcttggagttattgactccaaaatattgttcgacaaaagaatttttgatccagaggaaaggcgcccaccgcagttgacagaagtttctgaggaaatattgaaaaaatgtggtggtttgcctttggcgatcatttccatatcaagtttgttggcaagcaaaccaaagtcaaaagatcaatgggacagggtcaaggtttctcttagctctacgcttgaaaggactccagacattgaaaccatggaatgggtgctatcactcagttactctgatcttcctaatcatttaaaaacatgtctgttatatttgagtatattccctgagggctatgagataaacagggaacgtttggtgagtagatggattgctgaaggattcatttacaaaaaacatggacaaaatccatatgaagtgggggacagttattttaatgagcttgtgaacagaagcttgattcaaccagcaaacattaagcctgatggtcagacaaatgcttgtcgagtggatgacaccgttcatgattttattgtgtccatgtcagttgaagaaaatttcgttacattatttggtggttcaaaattggtaccaaggtcacatggtaaggttcgtcgattatctattcaaaatggcggcattcaagaaaatattgtcacatcaacgcacttggttacatcgcaagtccggtcactaactttatttgctgtagaaatgccatctcttttaggttttggtatgttacgtgtattggacctagaagattgttatgcattagaagaccatcatcttacgaacctggaaaggctagtccagttacggtatttgagtataagaacatcacccattagtgaactcccgaaacaaattgggcagcttcaatatctggaaacactagatttaagagctacgggtgtggaagaattgccatcaaccattggtagactaaagagtttggtccgtttattcgttgattatcatgttaaattaccaaaagaaatcagcaatatgcatgcactggaagagctaacaagtttctcagccttgatgtactctccagactttctgaaagaactaggtcagcttacaaacatgagggtgctccgagtaatttgtgactgtgatagctttaaaggtgatgcaggaagttgcttggaaaatttagcttcttctttatgtaatctaggcacatataaccttcattccctttttgttgacatcaatggatatggtgaagacaacttctcactagatacatggcaacctgttccatctagactaagaagattttccattgaccggtggtgccccatcaataagattccgaattgggtgggttcactgatcaaccttgaagagttagtcctatatgtcaacaaaatttggcaggaggatttcgaattgctaggacatatgcctgctctgtcatctctgaccatatactcaaatactgcccttcaagggaggatcatcatcagtggattccattctaccaagtttttcaagttctattgcaatcctgcagggttaacctttgacgcaggaagtctgttaaagctcgaatgccttgatgtcataatgaatgtgttcaacacgaagtcttcaaatggtagctttgattttggcattcaatatcttaccaaccttagaaatgtctacattcaacttgattgtaatgggtcgactggtggagaattggaagcagctaaagcttccatcaagagctcagtaaacaaacttccaggacagcctaagctgaacttgagcacattgaatgaaaatatgttagtccatgaagaagctaattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MEAAIVSASTGVMRSLLAKLTNLLGGEYKLLKWLRREMEFLESE LRSMSIFLERLEDTQKLHPQMKDWRDRVRELAYDIEDCIDDFILQLDSKDAKVGFGQK LLASRRIGHMIRELKARVMEESERQRRYMLDGLASGPSVRVKVDPRLSALYVDEDRLV GIDAPRDEIIGRLLDKRRSASAKQVMTISIVGCGGLGKTTLANQIYCKIKGKFECAAF ASVFQNPNTKKVLTNILSQVATTAAVEDDEQAIINKLREYLSDKRYIVIVDDIWDMQI WKFIECALVKNCRGSRIITTTRIHDIAKLCCSSHGDYIYEMKPLGVIDSKILFDKRIF DPEERRPPQLTEVSEEILKKCGGLPLAIISISSLLASKPKSKDQWDRVKVSLSSTLER TPDIETMEWVLSLSYSDLPNHLKTCLLYLSIFPEGYEINRERLVSRWIAEGFIYKKHG QNPYEVGDSYFNELVNRSLIQPANIKPDGQTNACRVDDTVHDFIVSMSVEENFVTLFG GSKLVPRSHGKVRRLSIQNGGIQENIVTSTHLVTSQVRSLTLFAVEMPSLLGFGMLRV LDLEDCYALEDHHLTNLERLVQLRYLSIRTSPISELPKQIGQLQYLETLDLRATGVEE LPSTIGRLKSLVRLFVDYHVKLPKEISNMHALEELTSFSALMYSPDFLKELGQLTNMR VLRVICDCDSFKGDAGSCLENLASSLCNLGTYNLHSLFVDINGYGEDNFSLDTWQPVP SRLRRFSIDRWCPINKIPNWVGSLINLEELVLYVNKIWQEDFELLGHMPALSSLTIYS NTALQGRIIISGFHSTKFFKFYCNPAGLTFDAGSLLKLECLDVIMNVFNTKSSNGSFD FGIQYLTNLRNVYIQLDCNGSTGGELEAAKASIKSSVNKLPGQPKLNLSTLNENMLVH EEAN</aaseq> |
| Gene Sequence |
<dnaseqindica>40..827#3433..5401#acaacatgtgctgtgaatttgaaaggggaaataccagctatggaagcagcgatagtgagtgcttcgacgggagtgatgcgttccctcctcgccaagctcacaaaccttcttggtggtgagtacaagctacttaagtggctccgtagggagatggagttcctcgagagcgagctccgtagcatgagcatcttcttggagaggttggaggacacgcaaaagcttcacccccaaatgaaggattggagggatcgagtacgcgagttggcatacgacattgaggattgcatcgacgacttcatactacagcttgattccaaggatgcgaaggttgggtttgggcaaaagcttcttgcatcccgtaggattggccacatgattcgagaactcaaggcgcgtgtaatggaggagagtgagagacaaaggaggtacatgcttgatggcttggcatctgggcctagtgttcgtgtgaaggttgatccacggctatcggctctctatgtcgacgaggacagattagttggtattgatgccccgagagatgagatcattgggcggctgttggacaagcggagaagtgcctcagcaaaacaggtcatgacaatttccatcgtgggttgcggaggattggggaagaccacccttgccaatcaaatttactgcaaaatcaaaggaaaatttgagtgcgcagcttttgcgtcagtgttccaaaatcccaacaccaagaaggttttgacgaatattctttcccaagtggccactactgctgctgtggaagacgatgagcaagccatcatcaacaagctaagggaataccttagtgacaagaggtacgtacaccaccatccctatgtttttttttatgacgttttaatatggattaggatctaatactccctctatttttactttggccaagtttacagagaaattttagcaacatctataacaacaaatttgttttattaaaactaacatacaatatatttgataatatgtttgttttgtgttgaacatgttactatattttttataaacctagtcaaacataaaaaaaaattaactaacaaaagagtcaaaacgattaatgatatgaaacatatgtagtaattgatattcctagtataccatgtagggtactacactcaagggtaatatagacttttcgctaatcctatacacctcacatgctacaaatgctgatctaatatggtacttctccacactccttgtaagtggcacaggtgctccgtagcaattgagacctgccaataatccttccatttatccttatatgcgtgaacccgccatgggcattcatctttctccttcacacacacctcacctcataaacatttttgcatgacttctctaccctcaactccctttgaatcttccaatggaaaaagtacgaattacacccccccccccgaactatcgcggttgaccgaattaccccctacccgattgagatgacttaatctctatcgggcattaactaaagaccatcacagatgactcatccgtgacggactctatactaatgcccgattgagatgacttaatctttatcgggcattaactaaagcccatcactgatgattatttttccattttccatatgaaatgtttatattcaatttatgtggtattttttattttcaatttatgagaactttaaatataattttaggctgatttttgtgtttcaaatgtaaaaaacacaaacaacaaaattgtacaactcatcgagatttacaactattgtattggtcctttttacaaataagtacatttgaacaatttaaattttgaatgttcaaaatttgacatcttcgaacaaaaatagggttaataaatgatatcaaatagaaaagtcaccaaaaccaaaattgtagaattcatcgaggtgcaaaatttttattttggtcatttttccatctgactctatttgaacaatttgaaatttgaaattcaaagtttgagaactttaaatagaattctttttattagtgaacgacttcaactgaaaagtcattaacaacaacaaagctgtataactcatcaaggtctataacttttattttggtcatttttctatataacgttttttaacaatttgaatttgaatttgaaaatatgacaacttcaaataacatttttaaatactaaatgatttcaactagaaaagtcatcaacaacaaagttgtataacacatcaagatctataacttttatttcggtcatttctttattcgacaaagtgatagtaacattattcacaaaattcacatatctctcatctagctattttatgaacaatgttactaacactttgtcagatgaaaaaatgacaaaaataaaagttatagatcttgataagttatacaactttgttgttgatgacttttttagttgaaattatttagtatttgaaaatgttgttttgaagttatcatattttcaaattcaaattcaaactattcaaaaaaagttatatagaaaaatggccaaactaaaagttgtaaatcttgataagttatacaattttgttgttgacaattttttcatttggaatcatttagtatttgaaaatgttatttgaagttgtcatatttttaaattcaaattcaaactgttaaaaaaagttatatagaaaaatgaccaaactaaaagttgtaaatcttgataagttatacaattttgttgttgacaatttttccatttgaaatcatttactacccgaaaaattattttgactaataaaataaattattatactgcagttaattattttgctacaggtcaacttacaatataaacatttcatataaaaaatagaaaaatactcatcggtgatgggcattagttaaaccctgatagagattaagtcatatcaatcgagcattagtatagagcccgtcatatcaatcgggcctagtttgtatctaaatcgggcccaagttggtgcccgtcacggatgacagccaacttgaggcccgattgagatatggaatgttatctcaatcaggcctaaactacggcctgtcacgaatagattttattcgtgacgggcctgagttttatacccatctaacatgtctgtgcgaccatatctcaatcggacgctttatcggcccgattgagataacttccttgtgacagcccgctaattccaggcatgttagaggcagccacagatggaaggatctgtacttgtgtcagataagcataaaaatttcgtctagctccattgctcatgctccctttttactttttttttagtttttttgtcactcattttaatataagaattaatagttatttgagatttattttcctatttacatgtaataattaaggtagtacatggttattcctcagaaaactgtaactccgtgcgtgcataactcaaacatgtgatgtgttacacaggtacattgtcatagttgatgatatatgggatatgcaaatatggaaatttattgaatgtgcgttggtcaagaactgccgtggtagcagaattatcacaacaacacgtatacatgatattgctaaattgtgctgttcatctcatggcgattatatttacgaaatgaagcctcttggagttattgactccaaaatattgttcgacaaaagaatttttgatccagaggaaaggcgcccaccgcagttgacagaagtttctgaggaaatattgaaaaaatgtggtggtttgcctttggcgatcatttccatatcaagtttgttggcaagcaaaccaaagtcaaaagatcaatgggacagggtcaaggtttctcttagctctacgcttgaaaggactccagacattgaaaccatggaatgggtgctatcactcagttactctgatcttcctaatcatttaaaaacatgtctgttatatttgagtatattccctgagggctatgagataaacagggaacgtttggtgagtagatggattgctgaaggattcatttacaaaaaacatggacaaaatccatatgaagtgggggacagttattttaatgagcttgtgaacagaagcttgattcaaccagcaaacattaagcctgatggtcagacaaatgcttgtcgagtggatgacaccgttcatgattttattgtgtccatgtcagttgaagaaaatttcgttacattatttggtggttcaaaattggtaccaaggtcacatggtaaggttcgtcgattatctattcaaaatggcggcattcaagaaaatattgtcacatcaacgcacttggttacatcgcaagtccggtcactaactttatttgctgtagaaatgccatctcttttaggttttggtatgttacgtgtattggacctagaagattgttatgcattagaagaccatcatcttacgaacctggaaaggctagtccagttacggtatttgagtataagaacatcacccattagtgaactcccgaaacaaattgggcagcttcaatatctggaaacactagatttaagagctacgggtgtggaagaattgccatcaaccattggtagactaaagagtttggtccgtttattcgttgattatcatgttaaattaccaaaagaaatcagcaatatgcatgcactggaagagctaacaagtttctcagccttgatgtactctccagactttctgaaagaactaggtcagcttacaaacatgagggtgctccgagtaatttgtgactgtgatagctttaaaggtgatgcaggaagttgcttggaaaatttagcttcttctttatgtaatctaggcacatataaccttcattccctttttgttgacatcaatggatatggtgaagacaacttctcactagatacatggcaacctgttccatctagactaagaagattttccattgaccggtggtgccccatcaataagattccgaattgggtgggttcactgatcaaccttgaagagttagtcctatatgtcaacaaaatttggcaggaggatttcgaattgctaggacatatgcctgctctgtcatctctgaccatatactcaaatactgcccttcaagggaggatcatcatcagtggattccattctaccaagtttttcaagttctattgcaatcctgcagggttaacctttgacgcaggaagtctgttaaagctcgaatgccttgatgtcataatgaatgtgttcaacacgaagtcttcaaatggtagctttgattttggcattcaatatcttaccaaccttagaaatgtctacattcaacttgattgtaatgggtcgactggtggagaattggaagcagctaaagcttccatcaagagctcagtaaacaaacttccaggacagcctaagctgaacttgagcacattgaatgaaaatatgttagtccatgaagaagctaattaattaaatggaaggggacgtaaatttcgagtacgaacattgcaggtatcaatttcggttttgattttttttttttgcagaaaggaccagtaccaaaaataccatttgtaatttatagtctaacaattctttacccatcaaaataattctcc</dnaseqindica> 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