Difference between revisions of "Os12g0111500"

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===Expression===
 
===Expression===
 
Please input expression information here.
 
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===Evolution===
 
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Please input evolution information here.
 
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F-box proteins comprise one of the large protein families in
 
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plants. There are more than 692 and 779 F-box genes in the
 
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A. thaliana and rice genomes, respectively (Xu et al., 2009).
 
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Previous studies demonstrated that F-box proteins are involved
 
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in the regulation of several biological processes, including circadian
 
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clock, self-incompatibility, photomorphogenesis, floral
 
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meristem, phytohormonal signalling, and responses to abiotic
 
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stresses (Sullivan et al., 2003; Moon et al., 2004; Ni et al.,
 
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2004; Smalle and Vierstra, 2004; Dreher and Callis, 2007). For
 
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instance, the F-box protein TIR1/AFB can bind to the transcriptional
 
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repressor protein Aux/IAA, thus promoting their proteasomal
 
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degradation and activating auxin-induced transcription
 
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(Dharmasiri et al., 2005; Tan et al., 2007). The involvement of
 
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F-box proteins in response to both biotic and abiotic stresses has
 
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also been reported.
 
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You can also add sub-section(s) at will.
 
  
 
==Labs working on this gene==
 
==Labs working on this gene==

Revision as of 12:00, 2 June 2014

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Annotated Information

Function

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Expression

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Labs working on this gene

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References

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Structured Information

Gene Name

Os12g0111500

Description

BTB domain containing protein

Version

NM_001072500.1 GI:115486961 GeneID:4351297

Length

1837 bp

Definition

Oryza sativa Japonica Group Os12g0111500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:601666..603502

Sequence Coding Region

601796..602257,602353..602529,603210..603398

Expression

GEO Profiles:Os12g0111500

Genome Context

<gbrowseImage1> name=NC_008405:601666..603502 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:601666..603502 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaa</cdnaseq>

Protein Sequence

<aaseq>MDCCVCSPMASMYRLPRNAICAACYEGAKAIIAFFNDDDDEHAD ADQGSVKPSRLTKLNSTTKGLRDAWEEVKQMRCREEETKQRASFLQQGFAAAWKDGIH TDIAVRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHL LAFLYTGSLATCTEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAE LSSSAALKERAMGAVVEHAEEVVFSPEYEEFAVRNAALCVQITRALLANKAFPAKTP</aaseq>

Gene Sequence

<dnaseqindica>1246..1707#974..1150#105..293#aatgctagcgttgctgttcacgtcgttgccaagccacaaggagaaggaagaaggaagagaaggcagaaggaagcagcaggagaaggagaaggccagaagaaacaatggattgctgcgtgtgcagtcccatggcgtccatgtacaggcttccaaggaacgccatctgcgctgcgtgctatgaaggtgccaaggccatcatcgccttcttcaacgacgacgacgacgagcacgccgatgctgatcaaggctcggtgaagcccagcagattgacaaagctcaatagcacaaccaaggtaagaccttcccatatctcattttgctcctttattaattagtcctttaggattggtatgactatgttcggtttacaaccatctcgattgtgccgtgtgctctacttccatgaaaaatctagccttgcgtgtttctagattctagaagcagagaaatttcggtagagaatgaattgataaaaaggaattccatctcacatgtaatgcaatataaactcttgttgcattggttacatcattcagtttcattgacgcatgcgtcaggtttgctgtcaacgttgtgttggttaatggtgaggagcaagtctcaatcgagagttgcatgagaatgataggtttggtggaaatctcattgtcaaaaggttcatgattgatcgatgcttaaagaccgttttcagaagctgtattttatatactagtgtgcttcaacagctgatgttatctttttattaaaaaaccaaaccggcatgacatacacaagattctccttgattgcaatagctggaatgaggaaataaaggtgcatgccttggacaagttgttatgctaatcttcagaaagaattaattctgaacagtcacagattaatgctaattggtgggggtgcatgggacatacatactacacttatcagcatcatagtgctaactgctaacatttgtgcgtgttactcaatgtagggattgagagatgcgtgggaggaggtgaagcagatgcgatgcagagaggaggagaccaagcagagggcatcgtttctccagcaaggcttcgcggcggcgtggaaagacggcatccacaccgacatcgccgtcaggcctggaactgggcccccaatccaagcccataaggccatccttgtcagtctctctctctctcagtttcagcccaataggccggccttcttttagtttgattgggcccaatgaaactaattaggcccagctatatacaggcgaccaggtcggaggtgttccgccacatcctcgccggcgacgacgactgcaaggcccccgccggcgactctctgtcgctaccggagctgacccacgacgagctctcccacctcctcgccttcctctacacgggctccctggcgacgtgcacggaggagcggcacctgcacgcgctgctggtcgccggcgacaagtacgacgtgccgttcctccggcgagcgtgcgaggcgcggctggcggcgggggtggaggcgggcaacgtgctgcggacgctggaggtggcggagctgagctcgagcgcggcgctcaaggagcgcgccatgggggcggtggtggagcacgcggaggaggtggtgttctcgccggagtacgaggagttcgccgtcaggaacgccgccctttgcgtccagatcacccgcgctctgcttgccaataaagcatttcccgccaagacgccttaatatcccttttatttttcttcgtttagaatttagttagacgacgtacgatgtataagtgtaattaaatgatagtacatgcatatctctggaattaatgtgatcaatatatacaatttagattctttgcacg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0111500, RefSeq:Os12g0111500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0111500&oldid=176255"