Difference between revisions of "Os05g0442400"
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===Expression=== | ===Expression=== | ||
Please input expression information here. | Please input expression information here. | ||
| + | Rice seedling endogenous Os05g0442400 gene expression may be mainly in the roots,with the continuation of the rice germ , the rice husk expression region of rice endogenous Os05g0442400 gene increases from top to bottom , and reach the maximum expression of the area after heading . | ||
===Evolution=== | ===Evolution=== | ||
Revision as of 10:46, 8 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here. In 1500bp upstream of the ATG start codon region，in addition to the basic core promoter acting element,there are some plants resist acting element processes related to abiotic stress , abscisic acid response elements , the light -inducible promoter acting elements , pathogens inducing factor acting elements , as well as root-specific binding sites.
Expression
Please input expression information here. Rice seedling endogenous Os05g0442400 gene expression may be mainly in the roots,with the continuation of the rice germ , the rice husk expression region of rice endogenous Os05g0442400 gene increases from top to bottom , and reach the maximum expression of the area after heading .
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0442400 |
|---|---|
| Description |
Similar to MybSt1 |
| Version |
NM_001062206.1 GI:115464142 GeneID:4338925 |
| Length |
1198 bp |
| Definition |
Oryza sativa Japonica Group Os05g0442400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:21699994..21701191 |
| Sequence Coding Region |
21700263..21700449,21700718..21701079 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:21699994..21701191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:21699994..21701191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAFYLGSMGGSPSSWGVAEVPVPSSRPWSKAEDKVFESALVAFP EHTHNRWALVASRLPGRSAHEVWEHYQVLVDDVDLIERGMVASPGCWDDDNNSAGHGR GSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFI RQANASSRGDSKRKSIHDITAP</aaseq> |
| Gene Sequence |
<dnaseqindica>743..929#113..474#agatccaaggctatctaagcaccggcatttgcatacagccgcctaagcaaagagcacagcaagtatacgcgaatctgagtgtgtgagagagactagtagcacagacgaaggtatggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggtatgtgtccaatacgtgccatcaaatcccggttctattccatgttatttttcattttttctgttattttcggtgcgctctttgagatcctaggtattattatattgttcttttcacatcggattacttccctggcccacatcacctgtctcaccaacacgcaggccctagatttccctatagcaacagtaccttgcactacacgtctactatatcgagttacggctaatttcctctttctctctttttctattattattatgaataggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatgatgtgtggtccgatcgaggatatgcattatgatccggtccagtctaggtttagttgtatttccatcaattccaactagctttcaaccccatttcaaagaggagagaacgaagggagtttagtcgtcggccctccctgttagttcctctctctgtgttgtgtaaaatatagctaggcaatagctaaaactaagcttggctggaacctgagatcaattgttgtgatactagtttgtgtacttgtcaaataatatttgtatccgtttaatttc</dnaseqindica> |
| External Link(s) |
