Difference between revisions of "Os02g0669000"
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Os02g0669000 gene is an protein-coding gene, who's organism name is Oryza sativa Japonica Group. Os02g0669000 has the ID 4330264 in NCBI Gene Bank, and it's internal genotype ID is 1330276. | Os02g0669000 gene is an protein-coding gene, who's organism name is Oryza sativa Japonica Group. Os02g0669000 has the ID 4330264 in NCBI Gene Bank, and it's internal genotype ID is 1330276. | ||
==Annotated Information== | ==Annotated Information== | ||
| + | cited by Liying | ||
===Function=== | ===Function=== | ||
Os02g0669000 can encode GDSL domain containing protein such as Lipase. Os02g0669000 protein also called putative anter-specific proline-rich protein, which function is expressing GDSL-like lipase/acylhydrolase. | Os02g0669000 can encode GDSL domain containing protein such as Lipase. Os02g0669000 protein also called putative anter-specific proline-rich protein, which function is expressing GDSL-like lipase/acylhydrolase. | ||
Revision as of 02:47, 9 June 2014
Os02g0669000 gene is an protein-coding gene, who's organism name is Oryza sativa Japonica Group. Os02g0669000 has the ID 4330264 in NCBI Gene Bank, and it's internal genotype ID is 1330276.
Contents
Annotated Information
cited by Liying
Function
Os02g0669000 can encode GDSL domain containing protein such as Lipase. Os02g0669000 protein also called putative anter-specific proline-rich protein, which function is expressing GDSL-like lipase/acylhydrolase.
Expression
Os02g0669000 can express GDSL-like lipase/acylhydrolase
Evolution
Os02g0669000 has two transcript variants: Os02g0669000-01,Os02g0669000-02
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os02g0669000 |
|---|---|
| Description |
Lipolytic enzyme, G-D-S-L family protein |
| Version |
NM_001054223.1 GI:115447816 GeneID:4330264 |
| Length |
4369 bp |
| Definition |
Oryza sativa Japonica Group Os02g0669000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:28045214..28049582 |
| Sequence Coding Region |
28045535..28045761,28045844..28046093,28046186..28046422,28046506..28046636,28049297..28049540 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:28045214..28049582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:28045214..28049582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctggacagatgctaccgccgattgcgcttgttgctgtggccatctgtatcaccgcggcggcggcggcgaaggtgccggcgatatacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccgccgtgccgcgggcaaacttcccgcacaacggcattgacttccccacgtcgcggcccaccggccggttcagcaacgggtacaacggcgtcgacttcttggctcttaacatgggattcaggcgcagccccccaccgttcctcgccgtggctaacaaaaccagcaacccattgttcagggggctccagggaacaaactttgcctctgcaggatcaggcattctcgactcaacaggtcaatccatcatcccaatgagcaagcaagtgcagcaattcgccgccgtgcaacgcaacatctcagcacgcatcagccagcaagccgctgacaccgtgctgtcgagatccctgttcctgatcagcaccggcggcaacgacatcttcgccttcttctccgcgaacagcacgccgtcgtccgcggagatgcagcggttcgtcaccaatctcgtatcgctctacacaaatcatgtcaaggatctgtacgttctcggggcgaggaagttcgccgtgatcgacgtcccgccgatcgggtgctgcccctacccgagaagcctgcaaccgctgggcgcttgcatcgacgtcctcaacgagctggcccgtgggttgaacaagggagtcaaggacgccatgcacggcctcagcgtgagcttcagcggcttcaagtactccatcgggagctcccatgccgtggtgcaaagcatcatgaagcatccccaacgactcggattcaaggaggtcacgacggcttgctgcggctccggcaagttcaacggcgagtccgggtgcacgccgaacgccacgctgtgcgacaaccggcacgactacctcttctgggacctgctgcacccgacgcacgccacgtccaagatcgccgccgcggccatatacaacggctcggtccgcttcgctgcgccgataaatttcaggcagctggtggatgaccagcactag</cdnaseq> |
| Protein Sequence |
<aaseq>MAGQMLPPIALVAVAICITAAAAAKVPAIYVFGDSTADVGNNNY LTGAAVPRANFPHNGIDFPTSRPTGRFSNGYNGVDFLALNMGFRRSPPPFLAVANKTS NPLFRGLQGTNFASAGSGILDSTGQSIIPMSKQVQQFAAVQRNISARISQQAADTVLS RSLFLISTGGNDIFAFFSANSTPSSAEMQRFVTNLVSLYTNHVKDLYVLGARKFAVID VPPIGCCPYPRSLQPLGACIDVLNELARGLNKGVKDAMHGLSVSFSGFKYSIGSSHAV VQSIMKHPQRLGFKEVTTACCGSGKFNGESGCTPNATLCDNRHDYLFWDLLHPTHATS KIAAAAIYNGSVRFAAPINFRQLVDDQH</aaseq> |
| Gene Sequence |
<dnaseqindica>3822..4048#3490..3739#3161..3397#2947..3077#43..286#agcccccacccagagccagcggactgcacctcgcagtccggcatggctggacagatgctaccgccgattgcgcttgttgctgtggccatctgtatcaccgcggcggcggcggcgaaggtgccggcgatatacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccgccgtgccgcgggcaaacttcccgcacaacggcattgacttccccacgtcgcggcccaccggccggttcagcaacgggtacaacggcgtcgacttcttgggtacgtacagcttcgccgcccgtctttcctgtgctgtattgcctcgcgactctgcttgccatgcgatgcgagtatacttcggcacttcgcggtatagtagcggctggcatcgttgcatatctgacaaccacgtatatagccggtgattgtttcgttttttctgcatgttttttgtcaacttcggcattgcaagttttgtaacggtgctagagttgagtaggggtgaagactggagacgattaagtcttcgtctctatactatttccgcggtccaattaccgaaggcaagaagtggaaattgctttgaaaacggagagattgtcgcatactccctccgtcccaaaaaaaaccaacaaaggttgtgccatactacctttgtaaaaaaaaaaactacggagagtatgtttagatttgtttttgttttatggatcatatcttatcttaatataacaatattttgagagggagtaaatagaacataaaaaatgttttgaagaagaaccccatacttcagaactgtgaagtgcgcaacgccagggcagtgtgccactgtggcgcacacattccagaggtcgcctatgcttaaatcgatagttggctcgttgctgcccgaattaaatttgaaaatatattgttaattcattttatttttagaaatattcgagatttattttttaaaaaaattataccgttgatcttgcacaatcattatgcgaatgtgaggtggtgcgacttcgcgggcggtatcgcgcgagactgcgcggtcttgcgaaatgaaagaacgataccagatttcaaaatggttaattagtgattaattattatgattagcaattattaagtaatcattaattattattagttaaatagttaattagatcattagtcactaaccaaatggagtttgggatggtgtcgctctctgcatgagcgagaccgctcgtcattcctgcgacagcgcgcggtcgtgcggtcgccccacgataccgtcgttgatgtcacccctatattatttttattttcggttgtatgagatcgactgtatatttctataaaaataaattacatcctaaatatttttaaaaataaaattgaatgaacagtatttttcaaatttaattcgctgctgctccacttccgcacggggcgcaggcacacaggctttgggaagcgatgcttgcaaagagtggcagtgtccggctgttggcaggcgggcgcggctgaatggaccgatcactcgagacttggcgcttgtcgcacataaatggctgacccgcttgcatgtactagccttgatccgggccaccacgcactcattgcatgtccgaattggtaccaaaatctacggcacacatgacaaatctacagcagacacgatctgacgtacggtccaacatcgaggtcatgcgatcgcctttttaagcgttgggactgtttgggatggagattgggagataatgccaaaatacgataatgtgagcagcgcacgtatttgaaaaattcaaatacattttttgctggcaaatgccttataaaagaaaataaagatttaatcgtacgcgaaacatcaacatcgataataaaattaatatttgtaactattatatatatatatatatattttccaatgtgatagcatcttaagatttcaggtatgatgaatacaatacacacacatttcgctttgttccgagtcgatctcgaagatcctattacaataatattataggtgtttttccttttttttatgttgtctagatgcggtttttctacatctaaatgtagttgcgcttagcgcgtctgtagcataatcgttttcgcgatgcgtactatattttcttctcatggtattgttttcctcaccaaacctgcggtggctagcctaggtgctaaaaggactttctcaaagcgtatgtcgttcattatatattttgacatgaggggtttggtcactggtggggagggtagggcaagaagcatggcggacctaggctcattggccatggaagagaccaagaagggccttggccatgcattaaatagaaggatggtgttgtggcctagagggagaaggaaggtgttttcgtcatgtactcttcttgcctgatatgtaatgtttctcagctgagaaccattgcttacatgtcgctaacttttccgatcaggaatggttaaatatcgaattccaatctataatgcttctccaacagttagagattgatcagtaaaggtttgacatatggatgaataatggtttcatgttagttaggctttatcgggatcattgcttctatagtagtaagagcgagtacaatagcagggtacaagtcagttgtaagcacatatggagaagagaagagaagagagataaagaagacgggctataaacttgtagccagttgcagcatggactataatacattgtgcatatgagaggtgggaccatatattaatggtgtagtatatacttataagtaactattgtatgaatgagctattagattggctataaataaattgaagctagtagttggctatactattaaacttgctctaatagttagtattattatggggaatgtgtaagccacgagcacggagtagcgcttgcatttttgttgtatatctcgaggatcacaatattcttcaacctctgtcagctcttaacatgggattcaggcgcagccccccaccgttcctcgccgtggctaacaaaaccagcaacccattgttcagggggctccagggaacaaactttgcctctgcaggatcaggcattctcgactcaacagtaagcacgtcggcataaacccaaagccactgcacgatttttcgctgaacaccggctgatgacgacgaaacacgtgtgtgcagggtcaatccatcatcccaatgagcaagcaagtgcagcaattcgccgccgtgcaacgcaacatctcagcacgcatcagccagcaagccgctgacaccgtgctgtcgagatccctgttcctgatcagcaccggcggcaacgacatcttcgccttcttctccgcgaacagcacgccgtcgtccgcggagatgcagcggttcgtcaccaatctcgtatcgctctacacaaatcatgtcaaggtaaaaccacctttcgcttgtctctcatcacacaattttacggcgaagaaacacaaagaatctaactgaaagttgacgcgtgagcgcggcaggatctgtacgttctcggggcgaggaagttcgccgtgatcgacgtcccgccgatcgggtgctgcccctacccgagaagcctgcaaccgctgggcgcttgcatcgacgtcctcaacgagctggcccgtgggttgaacaagggagtcaaggacgccatgcacggcctcagcgtgagcttcagcggcttcaagtactccatcgggagctcccatgccgtggtgcaaagcatcatgaagcatccccaacgactcggtatctgaacattctacgcttcagtttcggatttctgaccaacgcaaggttcagagtttcgtgacacggcattggtgtgcaggattcaaggaggtcacgacggcttgctgcggctccggcaagttcaacggcgagtccgggtgcacgccgaacgccacgctgtgcgacaaccggcacgactacctcttctgggacctgctgcacccgacgcacgccacgtccaagatcgccgccgcggccatatacaacggctcggtccgcttcgctgcgccgataaatttcaggcagctggtggatgaccagcactagctagagcgtggcagtgtcaccgtgtaacgtagtactactaattgttgtacgtcgccgactatgtgtctgtttgtctggtgatattggtgcgtaggatatgctgggctgtgttcatcagtggcttgtgctttaggcggtggtgtagtttggatacacataccaaaatgtcatctccgttattattgttgcccttgttggtatttgcggtgtttgtgttcccaagtcgggataatttgagcctggagcggatgagccaaggacatcgcagctgcttacttggtgccaaatcggaatacaaactctaaacatgtaggtacatac</dnaseqindica> |
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