Difference between revisions of "Os07g0164000"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | WAF1 is required for the stabilization of small RNAs through methylating the last nucleotide,as is Arabidopsis ''HEN1''. | |
===Expression=== | ===Expression=== | ||
Revision as of 13:20, 9 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
WAF1 is required for the stabilization of small RNAs through methylating the last nucleotide,as is Arabidopsis HEN1.
Expression
Please input expression information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this gene
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References
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Structured Information
| Gene Name |
Os07g0164000 |
|---|---|
| Description |
Double-stranded RNA binding domain containing protein |
| Version |
NM_001065491.1 GI:115470714 GeneID:4342471 |
| Length |
5251 bp |
| Definition |
Oryza sativa Japonica Group Os07g0164000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:3461634..3466884 |
| Sequence Coding Region |
3461827..3462261,3462542..3462670,3462781..3462897,3462973..3463124,3463219..3463897 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:3461634..3466884 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:3461634..3466884 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgttgcggctgagaggcggcgggggatcgaagcgagggatgccggcggcgccgacggtgacgcccaaggcggtgatccaccagaagtacggcgccaaggcgtgctacagcgtggaggaggtgcgggaggccgtcgacggcggctgccccggcctcgcgctgccgcagcagaccaggagcgtctaccgctgctcgctcgacatccccggcctcaccgtcgtcaccccgggcaccttcgtcaggaagaaggacgccgagcaagccgccgcgcagattgccctcgacaagcttggtattcagcccactgcaaatgctcccagtactcctgaagaagcatgggatgaacttattgctcgcatatctggtttttttacagatgagaacttcccctcgtcatctcatcctcttattggccacatgtgtgtgacattcagaagaaccggggaccgctttggtatgattcctatgtcagcaattgctgcatgtgatgtgaaggtcattggactgtgtaaacttattgaccccaaagcggagtttgatcctctcttggttttatcattaatctataatgctgccaaaaaatcccctggtgtctctgtcagtgatagcaacttctggatttggagtcagaagccttattcccctgaggctgttgatttggcacttcagcattggtctggcataacggatcccatagaagtagatgggatttttgttccttgtatgatggaggatgaacctaagacaataagacttactttatcacataatgaacattacatgggtgatatagtgtctaagctctctgcaagtgattcctcccacgctgttgtttcaagaactgttggcaaagcatcttctgagataaggctatatttctcagctccaaatgtgcaatttgtttctgagatatcacacaatgtggtttcttctcttggagatggctatatggagagcctaataaataagcgagcttccttcatttctggtcaaacaatttatggagatgcaattttggctaatgttggatatacaaggagagactcagagcttcatactgaagatgttaccttatccaactattacaggattcttctgggcaaatcaccagatgggaattacaagatatccagggattcaattctggtggcagagcttccatctgtgtattctcgttctagttggaagggtctctctccacgagatcttctctgctcattttgtcgccttcacagactagcagagccctacttcgctgtcaataggtgtgctagtgatggaaagaatgacaaggaaaacccagatatgttcaaatgtgatgtcaaaatatattcaaagaagcaggagcttttattggagtattcgacagctgatacttggagcaaggaatctgatgccattcacaattcttcattgaaggtgttgatttggttctgtagttatttcaagcaaccgaacaagcatgtactgaagctctctcattctaagagcactgatggcttcacaatatgtccagataattttttgcatgaatttgccatgttcttatctatttatggcaacagaggaggtgatgactcaagtgcatgcagtacagttggatcgctttctatggatacctcaaaacaaaagcttgaaaacaatgcagttttagcacacattgatggtccagattctggtgtttttccatcccatggatcattgacttgcataagctatactgcttccttggtggtgaaggacaaaacaaacagatatacgctagaaagcaacaatgagtttgagtttgagatagggactggggctgttaagaatcagattgaatcatgcgtgagtcagctgtcagttaatcaaagcgcatgtttcatagctgaattgcctcctaaggatttgatccttgctgcagctaatgagttttctcatgacctttccaagatatctagagacaattgcttcttggagttctctgtaaaggtattgcaggtaactgaaccattagaagatagaatggaaaaagccttgtttaatcctcctttatctaaacaaagagtggaattcgctgttcggtacatcaatgagctgcatgctaccacattggttgattttggctgtggatctggtagccttcttgattcattgcttgagcatccaacaacccttgaaaaagttgtcggtgttgacatttctcggaagggtctcacacgagcagcaaagagccttcatcagaagctgagcaagaaatcgttgatgcagacaagtgttccaacggctgtgctctatgatggttctataacggattttgattctcgcttatacagatttgacattggcacttgtcttgaggtgattgagcacgtagaggaggaccaagcaagtttatgtggcgacgtcgtcttgagttcgttctgccctacggtgctgattgtttcaacacccaactatgaatacaaccctatcctccagagatcagctatgccaaacaaggaagaagaaccagaagaaaacgctggtccttgcaagttccgaaaccatgaccacaagttcgagtggacaagatcccagttccagcactgggctaccggactcgcagaaaagcacaactacagcgtcgagttcagtggcgttggcggatcaggcgatgaaccaggcttcgcttcccagatcgctgtcttcagaagaatggcgtcgggtcaagatgaggtttgccaggagggagagctgcatcaaccttatgagcttctctgggaatggccaaatgcatcgttgccatctcactga</cdnaseq> |
| Protein Sequence |
<aaseq>MPLRLRGGGGSKRGMPAAPTVTPKAVIHQKYGAKACYSVEEVRE AVDGGCPGLALPQQTRSVYRCSLDIPGLTVVTPGTFVRKKDAEQAAAQIALDKLGIQP TANAPSTPEEAWDELIARISGFFTDENFPSSSHPLIGHMCVTFRRTGDRFGMIPMSAI AACDVKVIGLCKLIDPKAEFDPLLVLSLIYNAAKKSPGVSVSDSNFWIWSQKPYSPEA VDLALQHWSGITDPIEVDGIFVPCMMEDEPKTIRLTLSHNEHYMGDIVSKLSASDSSH AVVSRTVGKASSEIRLYFSAPNVQFVSEISHNVVSSLGDGYMESLINKRASFISGQTI YGDAILANVGYTRRDSELHTEDVTLSNYYRILLGKSPDGNYKISRDSILVAELPSVYS RSSWKGLSPRDLLCSFCRLHRLAEPYFAVNRCASDGKNDKENPDMFKCDVKIYSKKQE LLLEYSTADTWSKESDAIHNSSLKVLIWFCSYFKQPNKHVLKLSHSKSTDGFTICPDN FLHEFAMFLSIYGNRGGDDSSACSTVGSLSMDTSKQKLENNAVLAHIDGPDSGVFPSH GSLTCISYTASLVVKDKTNRYTLESNNEFEFEIGTGAVKNQIESCVSQLSVNQSACFI AELPPKDLILAAANEFSHDLSKISRDNCFLEFSVKVLQVTEPLEDRMEKALFNPPLSK QRVEFAVRYINELHATTLVDFGCGSGSLLDSLLEHPTTLEKVVGVDISRKGLTRAAKS LHQKLSKKSLMQTSVPTAVLYDGSITDFDSRLYRFDIGTCLEVIEHVEEDQASLCGDV VLSSFCPTVLIVSTPNYEYNPILQRSAMPNKEEEPEENAGPCKFRNHDHKFEWTRSQF QHWATGLAEKHNYSVEFSGVGGSGDEPGFASQIAVFRRMASGQDEVCQEGELHQPYEL LWEWPNASLPSH</aaseq> |
| Gene Sequence |
<dnaseqindica>4624..5058#4215..4343#3988..4104#3761..3912#2988..3666#2732..2909#2230..2478#1690..2147#1000..1092#193..483#cccacttcacccgactcctcgaatcctcctcgcctcgcttccgatttttctggggggtttagcgcctcccccaattcggcgaccaccccctcccgattccgcctcagttcctgcgtcgatcgattgcgaaaatccccttcgttaccaatcgcatttgtttgtttgtttttgtttgttttttttgggcgtttgatgccgttgcggctgagaggcggcgggggatcgaagcgagggatgccggcggcgccgacggtgacgcccaaggcggtgatccaccagaagtacggcgccaaggcgtgctacagcgtggaggaggtgcgggaggccgtcgacggcggctgccccggcctcgcgctgccgcagcagaccaggagcgtctaccgctgctcgctcgacatccccggcctcaccgtcgtcaccccgggcaccttcgtcaggaagaaggacgccgagcaagccgccgcgcagattgccctcgacaaggtattgatgagcattgtggtggtggcatgcaacttcacctttttttttttgctttacatgtgtagttgcaaaatcatcttccatatacatagagatttatcgtgtagcctttaagtttgtgattagatacggcgatatgcacaatgcacgattcagttagcaattgtgtctcacctatgaggaattgaggaatgtcacaagtgcaaggtggagttctctcaagtctcaaatagtcaaatctcaccttagtttggttattcaattcctgagtgagcacctaattgtgttgctcattgtctttgttgccatttcttttgatagtaccctctgttttctgttctgacaaaccaatgccatcgacgttagtgatcaagctgcacagtaacctagctcctttgtatttctctatcggataagctatgtacctatgatatatgaaatatcattactatgtgaaatgttgttcatgctgtggacctatggtgattaccatttcttttattgtcttcgttgtagcttggtattcagcccactgcaaatgctcccagtactcctgaagaagcatgggatgaacttattgctcgcatatctggtttttttacagatgaggttagtattttccacttgatcttggtgttgtgtcattgtagttcagggattaaggtgcacacaacagaaggctacagcaaaaggaagttttcatattcatgatgttacatatttgagtggaatgctatgctctgctggcaattgaggagtgtaatagggatataggatccttatgatgggctgtgtatgtcgtagggttgcatgatcataaccattgcaactcttataattggagttaagaaagactctgtattactggaattaagaggttatgggtatctatgtggtaaagagaccggaccatcgagcttactacaaaaaacatttcccttaaggctttgctttctatgtttctgcagtttcaacctgctttggtacacattcttctttacatagacatgtcacatgatcaccaaataccaatattgaagtctgaatcattttgtgtacacaagaatacaggattatagttgaagcatgcggctatataatcatattattattcagagcatcagatgtaactgaaaaacaattaatttgttctaaccgaccttttctaacatgtctgtcttttttttttcctactcttctattcagaacttcccctcgtcatctcatcctcttattggccacatgtgtgtgacattcagaagaaccggggaccgctttggtatgattcctatgtcagcaattgctgcatgtgatgtgaaggtcattggactgtgtaaacttattgaccccaaagcggagtttgatcctctcttggttttatcattaatctataatgctgccaaaaaatcccctggtgtctctgtcagtgatagcaacttctggatttggagtcagaagccttattcccctgaggctgttgatttggcacttcagcattggtctggcataacggatcccatagaagtagatgggatttttgttccttgtatgatggaggatgaacctaagacaataagacttactttatcacataatgaacattacatgggtgatatagtgtctaagctctctgcaagtgattcctcccacgctgttgtttcaaggtcagtattgtgccgagccttctcttctgaccattgtcattatttttggtgtgctgataatcttaaaattgtctcactgcagaactgttggcaaagcatcttctgagataaggctatatttctcagctccaaatgtgcaatttgtttctgagatatcacacaatgtggtttcttctcttggagatggctatatggagagcctaataaataagcgagcttccttcatttctggtcaaacaatttatggagatgcaattttggctaatgttggatatacaaggagagactcagagcttcatactgaagatgttaccttatccaactattacaggtatcgatttgttgattatgtcacttgtatgagatatattttgactttagtttaattcaatatgcatacttcattttttttataagaatcatctggttgtagatagatcttgatctgatttttcttcacactgtcatctactcgactactactcttccatcatttgaattgattttctctattgtttaggcacaccttctgttctcatcttagtttctaattcttctgaataacttgctttttggtaactcaggattcttctgggcaaatcaccagatgggaattacaagatatccagggattcaattctggtggcagagcttccatctgtgtattctcgttctagttggaagggtctctctccacgagatcttctctgctcattttgtcgccttcacagactagcagagccctacttcgctgtcaatagggtaagtgcctcttgtaaagtgttaggatcacctgtaagctccgaggagatggacgtgctaaagaatgctgaaaatcagtgtgctagtgatggaaagaatgacaaggaaaacccagatatgttcaaatgtgatgtcaaaatatattcaaagaagcaggagcttttattggagtattcgacagctgatacttggagcaaggaatctgatgccattcacaattcttcattgaaggtgttgatttggttctgtagttatttcaagcaaccgaacaagcatgtactgaagctctctcattctaagagcactgatggcttcacaatatgtccagataattttttgcatgaatttgccatgttcttatctatttatggcaacagaggaggtgatgactcaagtgcatgcagtacagttggatcgctttctatggatacctcaaaacaaaagcttgaaaacaatgcagttttagcacacattgatggtccagattctggtgtttttccatcccatggatcattgacttgcataagctatactgcttccttggtggtgaaggacaaaacaaacagatatacgctagaaagcaacaatgagtttgagtttgagatagggactggggctgttaagaatcagattgaatcatgcgtgagtcagctgtcagttaatcaaagcgcatgtttcatagctgaattgcctcctaaggatttgatccttgctgcagctaatgagttttctcatgacctttccaagatatctagaggtgaggtccaatcttaacacctcagtctgataattttcattaccagcttgaatttggctgaagcactatgctcaagttttaaccatccttgcagacaattgcttcttggagttctctgtaaaggtattgcaggtaactgaaccattagaagatagaatggaaaaagccttgtttaatcctcctttatctaaacaaagagtggaattcgctgttcggtacatcaatgagctgcatgctaccacattggtaaatattcttctcatcctacttccatatttgccaagcatattagcttatcactattgaagtaaatttgttcaggttgattttggctgtggatctggtagccttcttgattcattgcttgagcatccaacaacccttgaaaaagttgtcggtgttgacatttctcggaagggtctcacacgagcagcaaaggcacgtaacagagccttgatgactgttgatagttagttcaccctttaaaccatcccttttgttctctccaatgcttggcaatgactcctttcatctctctgaatttgcagagccttcatcagaagctgagcaagaaatcgttgatgcagacaagtgttccaacggctgtgctctatgatggttctataacggattttgattctcgcttatacagatttgacattggcacttgtcttgaggtcagttactcctgaactgtttctgctgtcttctcaattgcctctagtacatggataccacgattaattgattggattaagaatcacatagcctaatcacatttgtatagtagtacaatgggaagtccatccttagaaatgctgatgtggattcattattttgttcatagtagtacagtgggaagtccatccttacaaatgctgatgtggatttctctttgatctctcaaacgttagatttagttggacatgctattcgactgaccaaagctacttgcaggtgattgagcacgtagaggaggaccaagcaagtttatgtggcgacgtcgtcttgagttcgttctgccctacggtgctgattgtttcaacacccaactatgaatacaaccctatcctccagagatcagctatgccaaacaaggaagaagaaccagaagaaaacgctggtccttgcaagttccgaaaccatgaccacaagttcgagtggacaagatcccagttccagcactgggctaccggactcgcagaaaagcacaactacagcgtcgagttcagtggcgttggcggatcaggcgatgaaccaggcttcgcttcccagatcgctgtcttcagaagaatggcgtcgggtcaagatgaggtttgccaggagggagagctgcatcaaccttatgagcttctctgggaatggccaaatgcatcgttgccatctcactgagttcttgtggtagggagacacgacaactctattaactcttcaccatgcttgtaactgagatggagattctgattagtactgtagttggcattaacttgtcgtcagtaggaaactcaactcaagatcgtgtccccggatgttggtgggttaatgccttgggctgtgttctaaagtcaatgttgccaatttcacc</dnaseqindica> 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