Difference between revisions of "Os06g0127800"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
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| + | DLT,a GRAS protein,was identified to be involved in rice BR signaling.The brassinosteroid (BR) | ||
| + | response is fine-tuned by multiple strategies.Transcription analysis of most known BR-related genes, including | ||
| + | biosynthetic genes, signaling genes and also several downstream BR responsive genes, reveals DLT has extensive effects on BR-related genes expression, indicating its important role in modulating BR response. By promoter and protein sequence analysis, a complicated and subtle network was proposed that DLT may be involved in fine-modulating BR response at both transcriptional and protein levels. | ||
===Expression=== | ===Expression=== | ||
Revision as of 14:40, 9 June 2014
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Contents
Annotated Information
Function
DLT,a GRAS protein,was identified to be involved in rice BR signaling.The brassinosteroid (BR) response is fine-tuned by multiple strategies.Transcription analysis of most known BR-related genes, including biosynthetic genes, signaling genes and also several downstream BR responsive genes, reveals DLT has extensive effects on BR-related genes expression, indicating its important role in modulating BR response. By promoter and protein sequence analysis, a complicated and subtle network was proposed that DLT may be involved in fine-modulating BR response at both transcriptional and protein levels.
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os06g0127800 |
|---|---|
| Description |
GRAS transcription factor domain containing protein |
| Version |
NM_001063202.1 GI:115466135 GeneID:4339980 |
| Length |
3084 bp |
| Definition |
Oryza sativa Japonica Group Os06g0127800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:1464501..1467584 |
| Sequence Coding Region |
1464961..1466814 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:1464501..1467584 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:1464501..1467584 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttggcgggttgctcgttctcgtcgtcgaggcatcagatgagcaccgcgcagcgtttcgacatcctcccctgcggcttctccaagcgcggcagccgcggcgacggcgccgccccgcgggtcgccggcgacgccaggagcggcgccaccacctgctccttccggacgcaccccgcgccgccggtcacccagtccgtgtcctggggcgccaagccggagcccggcggcaatggcaatggcgcccaccgcgccgttaagcgggcgcatgacgaggacgcggtcgaggagtatggccccattgttcgcgccaagcggacgcggatgggcggcgacggcgatgaggtatggttccatcaatccattgcagggacgatgcaagcgacggcggcgggagaaggagaggaggcggaggaggagaaggtcttcttggtgccgagcgcggcggcgttcccgcacggcatggccgccgcggggccatcgctggccgcggccaagaaggaggagtacagcaagtcgccgtccgactcgtcgtcctcgtcgggcacggacggcggctcgtcggcgatgatgccgccgccgcagccgcccgagttcgacgcgaggaacggcgtgccggcgccggggcaggcggagcgggaggcgctggagctggtgcgcgcgctcaccgcgtgcgccgactccctctccgccggcaaccacgaggccgccaactactacctggcccggctcggcgagatggcctcgccggcggggcccacgccgatgcaccgcgtggccgcctacttcaccgaggcgctcgcgctccgcgtcgtgcgcatgtggccgcacatgttcgacatcggcccgccgcgggagctcaccgacgacgccttcggcggcggcgacgacgacgccatggcgctgcggatactcaacgccatcacgcccatcccgaggttcctgcacttcacgctcaacgagcgcctcctccgcgagttcgaggggcacgagcgcgtccacgtcatcgacttcgacatcaagcaggggctccaatggccgggcttgctccagagcctggccgcgcgggcggtgcctccggcgcacgtgcggatcaccggagtcggcgagtcgaggcaggagctgcaggagacgggagcgcggctggcgcgcgtcgccgccgcgctcggcctggcgttcgagttccacgccgtggtcgaccggctcgaggacgtccgcctgtggatgctccacgtcaagcgcggcgagtgcgtggccgtgaactgcgtcctcgccatgcaccgcctgctccgcgacgacgccgcgctgaccgacttcctggggctagcgcgcagcacgggcgccaccatcctcctcctcggcgagcacgagggcggcggcctcaactcggggaggtgggaggcgcggttcgcgcgcgcgctgcggtactacgccgcggcgttcgacgcggtggacgcggcggggctgccggaggcgagccccgcgagggccaaggcggaggagatgttcgcgcgggagatccgcaacgcggtggcgttcgagggccccgagcggttcgagcgccacgagagcttcgccgggtggcggcggcgcatggaggacggcggcgggttcaagaacgccggcatcggcgagcgcgaggcgatgcaggggcgcatgatcgcgaggatgttcgggccggacaagtacaccgtgcaggcgcacggcggcggcggcagcggcggcggcgaggcgctcacgctccggtggctggaccagccgctgtacaccgtgacggcgtggacgccggcgggcgacggcgcgggaggcagcaccgtgtcggcgtccacaacagcatcacattctcagcaaagctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MLAGCSFSSSRHQMSTAQRFDILPCGFSKRGSRGDGAAPRVAGD ARSGATTCSFRTHPAPPVTQSVSWGAKPEPGGNGNGAHRAVKRAHDEDAVEEYGPIVR AKRTRMGGDGDEVWFHQSIAGTMQATAAGEGEEAEEEKVFLVPSAAAFPHGMAAAGPS LAAAKKEEYSKSPSDSSSSSGTDGGSSAMMPPPQPPEFDARNGVPAPGQAEREALELV RALTACADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPH MFDIGPPRELTDDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHV IDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAF EFHAVVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTDFLGLARSTGATIL LLGEHEGGGLNSGRWEARFARALRYYAAAFDAVDAAGLPEASPARAKAEEMFAREIRN AVAFEGPERFERHESFAGWRRRMEDGGGFKNAGIGEREAMQGRMIARMFGPDKYTVQA HGGGGSGGGEALTLRWLDQPLYTVTAWTPAGDGAGGSTVSASTTASHSQQS</aaseq> |
| Gene Sequence |
<dnaseqindica>771..2624#gagtgagagtgagagagtgagagcagagaccaccaccaccggagaggttagtgagagaggagtggtaatggtgaggcaacaagagtaggttccatttcatatcatcactaggatagcgtagtttgtaggctgcatctccatctccatcgccattgattcgcattgcatccatcattttaggatgttctactagggttcttgatttttcttttggtttgttgttttgacgaatggaggtattgttgggattcgccgcctgctgctcgtcgtcgtcgtcgccgatgaggaggccgtgcgggctctgccccggcatgtccgatcgttcgtgatttgttttttctacatgttttagggcccatttgttcttgatcctattctttgattcttttgtactaagcattctaaggcgaagccacccattctttcctgcatatatacttacaaacacatagcccccatctgatctcacaaacattatttctctctctttttttctcagttttttctttgttgatttactgaccaaattctttggaagaacaacaagatcatctggtttttatctgctcattcttttgtacatcgaatcatatacatttccattccaccaaagccttagccagataccacagagagagtgtgagagaaatcagagtgagaaacagaggaggaagaagaagaagaagacgaggaggaggaggaggaggagcaggaggaggaggaggtctcttcttggcacgtcgcgttccggcgagtgacgtgtctccgggatgttggcgggttgctcgttctcgtcgtcgaggcatcagatgagcaccgcgcagcgtttcgacatcctcccctgcggcttctccaagcgcggcagccgcggcgacggcgccgccccgcgggtcgccggcgacgccaggagcggcgccaccacctgctccttccggacgcaccccgcgccgccggtcacccagtccgtgtcctggggcgccaagccggagcccggcggcaatggcaatggcgcccaccgcgccgttaagcgggcgcatgacgaggacgcggtcgaggagtatggccccattgttcgcgccaagcggacgcggatgggcggcgacggcgatgaggtatggttccatcaatccattgcagggacgatgcaagcgacggcggcgggagaaggagaggaggcggaggaggagaaggtcttcttggtgccgagcgcggcggcgttcccgcacggcatggccgccgcggggccatcgctggccgcggccaagaaggaggagtacagcaagtcgccgtccgactcgtcgtcctcgtcgggcacggacggcggctcgtcggcgatgatgccgccgccgcagccgcccgagttcgacgcgaggaacggcgtgccggcgccggggcaggcggagcgggaggcgctggagctggtgcgcgcgctcaccgcgtgcgccgactccctctccgccggcaaccacgaggccgccaactactacctggcccggctcggcgagatggcctcgccggcggggcccacgccgatgcaccgcgtggccgcctacttcaccgaggcgctcgcgctccgcgtcgtgcgcatgtggccgcacatgttcgacatcggcccgccgcgggagctcaccgacgacgccttcggcggcggcgacgacgacgccatggcgctgcggatactcaacgccatcacgcccatcccgaggttcctgcacttcacgctcaacgagcgcctcctccgcgagttcgaggggcacgagcgcgtccacgtcatcgacttcgacatcaagcaggggctccaatggccgggcttgctccagagcctggccgcgcgggcggtgcctccggcgcacgtgcggatcaccggagtcggcgagtcgaggcaggagctgcaggagacgggagcgcggctggcgcgcgtcgccgccgcgctcggcctggcgttcgagttccacgccgtggtcgaccggctcgaggacgtccgcctgtggatgctccacgtcaagcgcggcgagtgcgtggccgtgaactgcgtcctcgccatgcaccgcctgctccgcgacgacgccgcgctgaccgacttcctggggctagcgcgcagcacgggcgccaccatcctcctcctcggcgagcacgagggcggcggcctcaactcggggaggtgggaggcgcggttcgcgcgcgcgctgcggtactacgccgcggcgttcgacgcggtggacgcggcggggctgccggaggcgagccccgcgagggccaaggcggaggagatgttcgcgcgggagatccgcaacgcggtggcgttcgagggccccgagcggttcgagcgccacgagagcttcgccgggtggcggcggcgcatggaggacggcggcgggttcaagaacgccggcatcggcgagcgcgaggcgatgcaggggcgcatgatcgcgaggatgttcgggccggacaagtacaccgtgcaggcgcacggcggcggcggcagcggcggcggcgaggcgctcacgctccggtggctggaccagccgctgtacaccgtgacggcgtggacgccggcgggcgacggcgcgggaggcagcaccgtgtcggcgtccacaacagcatcacattctcagcaaagctaagctgacgatgaatggtgattaggtgaagagaaagaaagaacaaagcctttttttacagtgcttcttttgttaatgatgattagttcatacagtatgacaattcttttatacattcagagaaaagaaagaagaaagaaaggtgtagttttttgttttatagattgataggtggaaagattcaattaaatcaaattcaattcaatttttagattgtaattctttataaatattcttttggctgttgagagagagtcccctgcaaaatgtagctgcatgtagaagaaagaaagcaaagaagcagtagatagattagcaggggcagcatctctcacagtcactattagtgtctccggctgttattatacaacattattattacaatcaaattctttcatcattcattctacatgtaatctctgttcagaatcagaatgaaatgaaacatgtgttatatttctcc</dnaseqindica> |
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