Difference between revisions of "BGIOSGA000004"

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==Structured Information==
 
==Structured Information==
{{IndicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Indica Group]][[Category:Indica Chromosome 1]]
GeneName = BGIOSGA000004|
 
Description = Putative uncharacterized protein|
 
Definition = Oryza sativa Indica Group BGIOSGA000004, complete gene.|
 
tag = OsI_05434|
 
tid = BGIOSGA000004-TA|
 
pid = BGIOSGA000004-PA|
 
Length = 4606|
 
Source = Oryza sativa Indica Group
 
 
 
  ORGANISM  Oryza sativa Indica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Indica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:47223283..47227888|
 
CDS = 47227777..47227888,47226503..47227738,47226358..47226418,47226207..47226275,47226005..47226076<br>,47225800..47225868,47225293..47225704,47224413..47225224,47223627..47224064<br>,47223283..47223346|
 
GCID = <gbrowseImage1>
 
name=IndicaChromosome01:47223283..47227888
 
source=RiceIndica01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=IndicaChromosome01:47223283..47227888
 
source=RiceIndica01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>ATGGCTCCTCTCTGCTGCTGCCTCCTGCGCGCGCGGCGGCTCCTCTTCTCCTTCTTCTTCTTCGCCGTCGTCGTCGTCTTGTTCTCCTCCGTCTCCGTCGCCCAGATACCTGTATGGAGTTGTGGGTCAGTGAGTGAGATGGTACGTAATGCGTGGGCAGGGTTCCAGAGCATCGACTGCGGGGGCTCCGGCAACTATACCGACGAGGTCGGGCTGGAGTGGACGGGCGACGAGGCGTACGTGGGCGGCGGCGCAGGCACGACGGCGAGCATCTCGTCCATGTCGGGGCAGGGGCGGCGGCCTTACAGGACGGTGCGGTATTTCCCAGCGGACGGGCGCAAGTACTGCTACAGGGTGAGCGTGAGGGCCAGGACGCGGTACCTGGTGCGTGCGAGCTTCCTGTACGGCAACTTCGACGGCAGCAGGGTGTTCCCGGAGTTCGACCTCTACGTGGGCGCATCGCGGTGGTCCACCATCGTCATCTACGACGAGTCCAAGGTGGTGACGAGGGAGATGGTGGCGCTGGCTCAGTCCGGGTCGTCCTCTCTCTCCGTCTGCCTCGCCAACGCCACCACCGGCCACCCCTTCATCTCCACCCTCGAGCTCCGCCCTCTCAACGCCTCCCTCTACCACACCGCCTTCGAGGCCGCCTTCTTCCTCTCCCTCGCCGCCCGCATCAACTTCGGCGCCCCCACCGCCGACCCCGTCCGCTACCCCGACGACCCCTACGACCGCGTCTGGGAGTCCGACATGGCGCGCAGGCCAAACTTCCTCGTCGACGCCGCGCCCGGCACCATCCGCGTCGCCACCGACAACCCCGTCTTCGTGGCCTCCGGCGAGCGCCCGCCGCAGAAGGTGATGCAGACCGCGGTGGTGGGCACGCTGGGCGCGCTCACCTACAGGCTGGACCTCAACGGCTTCCCGGGCAGCGGGTGGGCCTGCTCGTACCTGGCGGAGATCGAGGACGACGCGGCCGCCACGGCGCGAAGGTTCAAGCTCTACATCCCGGGCCTGCCCGAGGTGAGCAAGCCGACGGTGGACATCGGAGAGAACGCGCCGGGGAAGTACCGGGTCTACCAGCCGGGCTACGACAACATCTCGCTGCCCTTCGTGCTCCCCTTCGCCTTCCGCAAGACGGACGACTCCGCCAGGGGCCCCATCCTCAATGCCATGGAGATCTACAGCTATATCCCCATACTCCCTGCCTCGCCCGACGCCGTCGCCATGGACGCCCCTGGCGGCGCGCTACCAGCAGCAGCACAGCTGGGCGCGGGAGGGCGGCGACCCGTGTGTTCCCGCACCCTGGTCCTGGCTCACATGCACCTCATCCAGAGTCATCGCCATGTACGAAACAACTTGACAGGCGCCATTCCACCGGAGCTAGCGGCGCTCCCATGCTTACAGGAGATCCTGCTTGACAACAACATGCTGACAGGCCCAATTCCGGACCTCAGTGCTTGTACAAACCTGACAGTCATACACTTAGAGAACAATCAACTGGAGGGCAGTGTGCCGTCATACCTAAGCGGTCTGCCCAAGCTCAGCGAGCTGTACCTAGAGAACAACAGGCTGTCTGGAGTCATTCCCAGGGCTCTGCTAAGTAGAAGCATTGTTTTCAAGTACTCAGGGAACAAGCATCTCCGAGTGGGGAAGCAAGAGGAGGAGGAGCGGAATGTGGTAATTGGGATATGTGCGCTGGTGGGAATAGGCTTGTTGCTTGCAGCTGCCCTGTGCTATGCCTATAATGTTAGTGTTAGCGGGAGGAAACAACAAGGTGCTAGTGCGGGTGGGAACAGCAAGAGCAAGAGCATCGTCGTGTCCGCGGAGCAGAAGAAGAAGGCAACACCAGTAGCAGCAGCAGGAGGAGGAATAGACAACATGATGGCGGCTATGGCAGCGCGGGGTCCGTTGGAGTTCAAGGTGAGGGAGCTGGAGGAGGCGACCAGCAAGTTCGCGAGGAAGATCGGGTCGGGCGGGTTCGGGGTGGTGTACTACGGGAGGCTGGGAGACGGGAGGGAGATCGCGGTGAAGGATACACCACCGCAACCTGGTGGCGTTCCTGGGCTACTGCTGGGAGCGCCACAGCAGCAGCTACATGCTGGTGTACGAGTACATGCACAATGGCAGCCTCAAGGAGCAGCTGCAGATGATGAGCATGAGCTGGCTCCGGCGGCTGCAGGTGGCGGAGGACGCGGCCAAGGGGATCGAGTACCTGCACTGCGGCTGCACGCCGGCCAATCATCCACCGGGACATCAAGACCAGCAAACATCCTCCTGGACGCCCACATGAGGGCCAAGGTGTCCGAACTGGGACTCTCCAAGTCCACTGAGGCAACCAACTCCACCGCCTATACCATCACCACCCACGTGCGCGCCACCCTCGGCTACCTGGACCCGCACTACTACGTCTCCCAGCAGCTCACCCACAAGAGCGACCTCTACAGCTTCGGCATCATCCTGCTCGAGCTCATCTCCGGCCGCCCGCCCATCCTGCTCACGCCCGGCGCCGGTGCCATGGCCAGCCTCGGGCCCTGGGCCAAGTCGCACTACGAGAGCGGCGACATCGAGGCCATCGTCGACCCGTCGCTGCGCGGGCGCTACCGCGACGTGCACTCGGTGTGGAAGGTGGCCGAGACGGCGGTGCGGTGCATCGACGCCGATCCCCAGGGGCGCCCGTCCATGCCCGAGGTGGTCAAGGACATCCAGGAGGCCATCGCGCTGGAGATGCCGTCCTCGGAGTCGGAGAGGCCCGCCGCCAGCTTCTTCTCTCCGGGGGCGGGGGCAGCCGGTGCGCGCTCCTCGGCGACGGTGCGGTCGCACGACCTCGTCATGGACAACCTCATTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCAGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTTAGCAAGTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGCAGCTAAATTCTTAA</cdnaseq>|
 
AA = <aaseq>MAPLCCCLLRARRLLFSFFFFAVVVVLFSSVSVAQIPVWSCGSVSEMVRNAWAGFQSIDCGGSGNYTDEVGLEWTGDEAYVGGGAGTTASISSMSGQGRRPYRTVRYFPADGRKYCYRVSVRARTRYLVRASFLYGNFDGSRVFPEFDLYVGASRWSTIVIYDESKVVTREMVALAQSGSSSLSVCLANATTGHPFISTLELRPLNASLYHTAFEAAFFLSLAARINFGAPTADPVRYPDDPYDRVWESDMARRPNFLVDAAPGTIRVATDNPVFVASGERPPQKVMQTAVVGTLGALTYRLDLNGFPGSGWACSYLAEIEDDAAATARRFKLYIPGLPEVSKPTVDIGENAPGKYRVYQPGYDNISLPFVLPFAFRKTDDSARGPILNAMEIYSYIPILPASPDAVAMDAPGGALPAAAQLGAGGRRPVCSRTLVLAHMHLIQSHRHVRNNLTGAIPPELAALPCLQEILLDNNMLTGPIPDLSACTNLTVIHLENNQLEGSVPSYLSGLPKLSELYLENNRLSGVIPRALLSRSIVFKYSGNKHLRVGKQEEEERNVVIGICALVGIGLLLAAALCYAYNVSVSGRKQQGASAGGNSKSKSIVVSAEQKKKATPVAAAGGGIDNMMAAMAARGPLEFKVRELEEATSKFARKIGSGGFGVVYYGRLGDGREIAVKDTPPQPGGVPGLLLGAPQQQLHAGVRVHAQWQPQGAAADDEHELAPAAAGGGGRGQGDRVPALRLHAGQSSTGTSRPANILLDAHMRAKVSELGLSKSTEATNSTAYTITTHVRATLGYLDPHYYVSQQLTHKSDLYSFGIILLELISGRPPILLTPGAGAMASLGPWAKSHYESGDIEAIVDPSLRGRYRDVHSVWKVAETAVRCIDADPQGRPSMPEVVKDIQEAIALEMPSSESERPAASFFSPGAGAAGARSSATVRSHDLVMDNLIATHSQRHTSMSSRRGGESGSGDSPRQWEEAKSTTPRLQPGSAGGRSAAPSAEMSSRGWGESGGGDSPQLQGDSSSCKKAKSQTPSLQPGSASEHVAASSATSVETGLEFGKVDGEAHAPRSPALGKATKALNRRAVAGGLDLDTKRLASVDSIFFGVSVFSTQLNS</aaseq>|
 
DNA = <dnaseqindica>1..112#151..1386#1471..1531#1614..1682#1813..1884#2021..2089#2185..2596#2665..3476#3825..4262#4543..4606#ATGGCTCCTCTCTGCTGCTGCCTCCTGCGCGCGCGGCGGCTCCTCTTCTCCTTCTTCTTCTTCGCCGTCGTCGTCGTCTTGTTCTCCTCCGTCTCCGTCGCCCAGATACCTGGTGAGTCTAATTAATAAGAATCTCTATATTTTATGGAGTATGGAGTTGTGGGTCAGTGAGTGAGATGGTACGTAATGCGTGGGCAGGGTTCCAGAGCATCGACTGCGGGGGCTCCGGCAACTATACCGACGAGGTCGGGCTGGAGTGGACGGGCGACGAGGCGTACGTGGGCGGCGGCGCAGGCACGACGGCGAGCATCTCGTCCATGTCGGGGCAGGGGCGGCGGCCTTACAGGACGGTGCGGTATTTCCCAGCGGACGGGCGCAAGTACTGCTACAGGGTGAGCGTGAGGGCCAGGACGCGGTACCTGGTGCGTGCGAGCTTCCTGTACGGCAACTTCGACGGCAGCAGGGTGTTCCCGGAGTTCGACCTCTACGTGGGCGCATCGCGGTGGTCCACCATCGTCATCTACGACGAGTCCAAGGTGGTGACGAGGGAGATGGTGGCGCTGGCTCAGTCCGGGTCGTCCTCTCTCTCCGTCTGCCTCGCCAACGCCACCACCGGCCACCCCTTCATCTCCACCCTCGAGCTCCGCCCTCTCAACGCCTCCCTCTACCACACCGCCTTCGAGGCCGCCTTCTTCCTCTCCCTCGCCGCCCGCATCAACTTCGGCGCCCCCACCGCCGACCCCGTCCGCTACCCCGACGACCCCTACGACCGCGTCTGGGAGTCCGACATGGCGCGCAGGCCAAACTTCCTCGTCGACGCCGCGCCCGGCACCATCCGCGTCGCCACCGACAACCCCGTCTTCGTGGCCTCCGGCGAGCGCCCGCCGCAGAAGGTGATGCAGACCGCGGTGGTGGGCACGCTGGGCGCGCTCACCTACAGGCTGGACCTCAACGGCTTCCCGGGCAGCGGGTGGGCCTGCTCGTACCTGGCGGAGATCGAGGACGACGCGGCCGCCACGGCGCGAAGGTTCAAGCTCTACATCCCGGGCCTGCCCGAGGTGAGCAAGCCGACGGTGGACATCGGAGAGAACGCGCCGGGGAAGTACCGGGTCTACCAGCCGGGCTACGACAACATCTCGCTGCCCTTCGTGCTCCCCTTCGCCTTCCGCAAGACGGACGACTCCGCCAGGGGCCCCATCCTCAATGCCATGGAGATCTACAGCTATATCCCCATACTCCCTGCCTCGCCCGACGCCGTCGCCATGGACGCCCCTGGCGGCGCGCTACCAGCAGCAGCACAGCTGGGCGCGGGAGGGCGGCGACCCGTGTGTTCCCGCACCCTGGTCCTGGCTCACATGCACCTCATCCAGAGTCATCGCCATGTACGTACGTCGTCTCTCTTTCAATTCCCGGGCGTTCCCTTCCTTCCTTGGAGTACTAACGTACGGTACGGGTGCAGAAATCTTTCAGGAAACAACTTGACAGGCGCCATTCCACCGGAGCTAGCGGCGCTCCCATGCTTACAGGAGATGTACGTAACACAAGCGACTCGCTCGCTCTTAATTCCATTAATTAAGCTGATCGATGAGCTCTCTTCTCTGACGGATTTGCAGCCTGCTTGACAACAACATGCTGACAGGCCCAATTCCGGACCTCAGTGCTTGTACAAACCTGACAGTCATGTGAGTAACTCAATTCACCACTTGCACGCACTTGCACCAGGCTTATTTCTGTTTTCCTTTTTCTACTAGTATATACTTATGTCCATATGATAAACTAACAATATTGTCGAACTGAAATTTTCTTTTGCAGACACTTAGAGAACAATCAACTGGAGGGCAGTGTGCCGTCATACCTAAGCGGTCTGCCCAAGCTCAGCGAGCTGTGAGTCTTTTATATACTGTATGTATTACTATATATCCTAGTCTAGGAACATATATAATAGTACCATATAAGTGAGAGATTTGTTATGAAAATGCATGCTGATAATTAAATTATAAGAGAATCTGCATATATGCAGGTACCTAGAGAACAACAGGCTGTCTGGAGTCATTCCCAGGGCTCTGCTAAGTAGAAGCATTGTTTTCAAGTGAGTGATATATATGATGTATGCATATAATGATGAAATAAAATGAATGGTGAAATTAATTAGTATATGCGCGCGGCATATATGTATGTTTGCAGGTACTCAGGGAACAAGCATCTCCGAGTGGGGAAGCAAGAGGAGGAGGAGCGGAATGTGGTAATTGGGATATGTGCGCTGGTGGGAATAGGCTTGTTGCTTGCAGCTGCCCTGTGCTATGCCTATAATGTTAGTGTTAGCGGGAGGAAACAACAAGGTGCTAGTGCGGGTGGGAACAGCAAGAGCAAGAGCATCGTCGTGTCCGCGGAGCAGAAGAAGAAGGCAACACCAGTAGCAGCAGCAGGAGGAGGAATAGACAACATGATGGCGGCTATGGCAGCGCGGGGTCCGTTGGAGTTCAAGGTGAGGGAGCTGGAGGAGGCGACCAGCAAGTTCGCGAGGAAGATCGGGTCGGGCGGGTTCGGGGTGGTGTACTACGGGAGGCTGGGAGACGGGAGGGAGATCGCGGTGAAGGTGGCGAGCAGCAACGAGTCGATCCAAGGGAAGAAGCAGCTGGCCAACGAGGTGGCGCTTCTGTGCAGGATACACCACCGCAACCTGGTGGCGTTCCTGGGCTACTGCTGGGAGCGCCACAGCAGCAGCTACATGCTGGTGTACGAGTACATGCACAATGGCAGCCTCAAGGAGCAGCTGCAGATGATGAGCATGAGCTGGCTCCGGCGGCTGCAGGTGGCGGAGGACGCGGCCAAGGGGATCGAGTACCTGCACTGCGGCTGCACGCCGGCCAATCATCCACCGGGACATCAAGACCAGCAAACATCCTCCTGGACGCCCACATGAGGGCCAAGGTGTCCGAACTGGGACTCTCCAAGTCCACTGAGGCAACCAACTCCACCGCCTATACCATCACCACCCACGTGCGCGCCACCCTCGGCTACCTGGACCCGCACTACTACGTCTCCCAGCAGCTCACCCACAAGAGCGACCTCTACAGCTTCGGCATCATCCTGCTCGAGCTCATCTCCGGCCGCCCGCCCATCCTGCTCACGCCCGGCGCCGGTGCCATGGCCAGCCTCGGGCCCTGGGCCAAGTCGCACTACGAGAGCGGCGACATCGAGGCCATCGTCGACCCGTCGCTGCGCGGGCGCTACCGCGACGTGCACTCGGTGTGGAAGGTGGCCGAGACGGCGGTGCGGTGCATCGACGCCGATCCCCAGGGGCGCCCGTCCATGCCCGAGGTGGTCAAGGACATCCAGGAGGCCATCGCGCTGGAGATGCCGTCCTCGGAGTCGGAGAGGCCCGCCGCCAGCTTCTTCTCTCCGGGGGCGGGGGCAGCCGGTGCGCGCTCCTCGGCGACGGTGCGGTCGCACGACCTCGTCATGGACAACCTCATGTACGACTCCAGCTTCTGCGATTCCCTCAACCTGCCCCGCACGCCCAGATAGAGACATACTCGATCGTCTCTACTCCTATTTTTCTGTTTAATTACTTCATCATTACTAACTAACTAGTAAAGTGGTCCGCCTAAATTACGCGGCTGGCATCACCAGTGTGTTTTTTCCCCAAATCACACTCTAATTCCTAGCCTTTGGATGGACATCAAGATTCGTATAACGTTATCGGGCCCGCAGCCTTTGTCGGGTTAAGATCCGTTTTGTGTCAACCCGCTTTCGACCAAACCCAATCCAAACACGATTTCGTGATATTTCCGACACAGGGTGGGGATTTTTTTTTGAAACAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCAGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAAGTGAGCATGTGTTTTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAGGATTATTTTTATGTTTTGACTTTGTTAGGTTAGCAAGTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGCAGCTAAATTCTTAA</dnaseqindica>|
 
Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA000004 EnsemblPlants:BGIOSGA000004]|
 
}}
 
[[Category:Genes]]
 
[[Category:Indica mRNA]]
 
[[Category:Oryza Sativa Indica Group]]
 
[[Category:Indica Genes]]
 
[[Category:Indica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 05:34, 12 May 2015

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Annotated Information

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Structured Information