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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{IndicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Indica Group]][[Category:Indica Chromosome 2]] |
| − | GeneName = BGIOSGA005405|
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| − | Description = cDNA clone:J013094E21, full insert sequence|
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| − | Definition = Oryza sativa Indica Group BGIOSGA005405, complete gene.|
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| − | tag = OJ1548_F12.25|
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| − | tid = BGIOSGA005405-TA|
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| − | pid = BGIOSGA005405-PA|
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| − | Length = 5606|
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| − | Source = Oryza sativa Indica Group
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| − | | |
| − | ORGANISM Oryza sativa Indica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Indica Chromosome 2|Chromosome 2]]|
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| − | AP = Chromosome 2:36446507..36452112|
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| − | CDS = 36451704..36452112,36451373..36451612,36451114..36451280,36450842..36451022,36450702..36450754<br>,36450419..36450562,36450163..36450267,36449567..36449692,36449281..36449478<br>,36448804..36448910,36448483..36448645,36448206..36448271,36448019..36448112<br>,36447766..36447878,36447421..36447491,36447078..36447279,36446507..36446953<br>|
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| − | GCID = <gbrowseImage1>
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| − | name=IndicaChromosome02:36446507..36452112
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| − | source=RiceIndica02
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=IndicaChromosome02:36446507..36452112
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| − | source=RiceIndica02
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</cdnaseq>|
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| − | AA = <aaseq>MAALVRPAVLPVCAMTGGGGNDKRSPPQQRSWWGGNKQRLPHQPRRQPGGNGGRGGGGGALDQVLGVLRRDGEFLQAAAGAPLRDIFWLRFLEKKKQQRRRKQPKPKPKPPEQQQQQEEAAAASQAPSFPPPSYQPGLSCLDLMTADFEALKLYIGYSKHAIEQQFLKGKRQPQHQQTPKPKLQQQQQQQQKKQQQQEHQNQTLQPPAFPPPSYPPGLSCMELMMADIEALKLYINYYVAILTTPLPQHYDPEILSRYFTSRPHILAFRTIQIIFAFVSAAVKMQISKRTNLITDATYSGNSTGSKGFNASQYMVGQLLKETFLDLGPTFVKVGQSLSTRPDITGSEISEALAELHEKVPPFPRKDAMKIIEGEFELPVSHIFSYISDEPVAAASFGQVYQGRTVDGALVAIKVQRPNLLPSVLRDIYILRLGLSFVRKVAKRKSNIALYADELGKGFVGELDYNIEAANATKFLEYHSRYSFMLVPKVLKQLTRRRVLTMEWVSGENPTDLLSLSKGISSEIAESSEKQKIEATARLLDLVNKGVEASLVQLLETGLLHADPHPGNLRYTPEGRVGFLDFGLLCMMEKKHQHAMLASIVHIVNGDWASLVYDLTAMDVVPPRTNLRRVTMDLEDALGEVTFEDGIPDIKFSRVLGKIWSVAFKYHFRMPPYYTLVLRSLASLEGLAIAADGTFKTFQAAYPYVVRKLLSDNSVATRRLLHQAIFNKRKEFQWNKITVFLKLASARGNFRYNTGVLPERKGLDVAKLVEISDASSSLHLNRATPERALHTANLCLRLLLSKESIVIRRLVMTANAKSLARDLISKDASIYRVLLSRVLADVIFQWMVKATGFKRAGQLEPHPRVTAGKNDEDLGLSKEAPALVTFQTAVRDRRLKVIFSKFVRDIREDPILMVRVSWNMFAISVVSAAIGVHRFIVVLSEEFLSTLPPPVPPPRLVQIQSI</aaseq>|
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| − | DNA = <dnaseqindica>1..409#501..740#833..999#1091..1271#1359..1411#1551..1694#1846..1950#2421..2546#2635..2832#3203..3309#3468..3630#3842..3907#4001..4094#4235..4347#4622..4692#4834..5035#5160..5606#ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGTTGCTTACACCAAGCAGTGCCCAATTAGCTGTTGCTTAATCATTTAAGTTTCATCGATTGCATTATTAACTTGTTTTATGATTTTTGCTAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGGTAAAAGCTGTAATTACTGTTCATCTTTGCTCTTACTAAGCTTCAACTGATAAATCTAATAGTTCAGTGTGCCATGCTTCTGTATCTGTAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGGTCAGGTTTTCAGGTTCGATAGCTTTAAGCCATGGTAGTGGCCACTCGGTTCGGATTAATGTTGACTTGCTTGTCTTCTGTGTGCAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGTTAGGTAAAATTACTGCAGGATACAATAACATTTCTGCATTTCTTTAATTGCTTCATCATCTTCAGAAGTGTTTTGTTGATCATTAAACAATCTCCATAGTCTTTCTCAAAATTAACTGGCGCACACCCCAATCATAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTAATCATATCTTGCAAAACTTTTCCCGTTCTTTTTTAAATATTAGAGACAGGAGCTTTGTAGTTTCTGATTAAGCCTTATTATGTTTTTCTGTACTATCTCTTTCAATTTTTCTGTTATGCTCAGTGTACTCTTGTTTGTTGTACTTTAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGGTACGTATGCAACTTTATCTCCATTAAATATATAAGCTCATCTGTTTTTGAGTGTTTTTAATTCTGCCAAGTGCTAATGCCCACATCTTGTTCATAGAAGATATATACACCATAGGTTCTTCGCCTACTGTTTGACAAAAAAGAAAGTTCATCTTCTGATCCTCAGCATGAGCATAATACCTGATGCCTTCTATTTTGTTGTCCCTAAACAAGCTTTACCGTTTCCCTGATTTTGTGTTTAATTAAGAGTGTTAATGTGACTATGATAACCTGTGCTGACACAAGAAACATTGTACAGTACTTTCTTTCAATACAGATGGACCTTGTCTCATTTAAGTTTATCTGTATTTAGATTAAATGTTCTTGCACTTCATTTTATTTCTTTATTTTGCTTACAAAATTATAGCATTGCAGCATTTTTCCACTATAGTCCTAGCAACTTGATGTCTTTTCTACCATATATGTTTCAGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGTGCTTTGGTCTTGTCTCCTACCTATACTTTACTAACATATGCCTATTCCTGTTTTGGTGTTTTATCTCATAATTTGTACTTCTGTAGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTATTTATGTTCGTCACAAGTTATTTCTAAATTATCTGCTTCATTTGAAAAAAGATGAGCACCATAAATAAATTAATCCACAACAATCAGTGCTCCAGGGTAGCAAATATTTGGAATTGAAGTTGTGCTCAGTGAATAGGGCTTTTTTGTCAGTTAGAAACTGCAGTTTACATGGTTCTTTGCAATATTGTGTTTGTTTCAGAAACACGCAGCTTAATTTTATAAATATCTATCACTTCAATATTGATGTTCTTTTCTCTCTGCTGTGGTAGAAATATAAACATTATAACAACAATTACTACATTTCAATAAACATTTTTCCCCTCTGGACAAAATGTTTTAACATCTTGTTAATTACTATGATGATAAGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTAGTGTTAATTTATCTTTTTATGTACGCTCTATAAGAAAATGTCTTCTTACTATAATCAGCAGAATCATGTTATACAGTGGGTCTGATGTTTTTGTAATGGTTTTCCTCTGTCACTCTCCCTTTGAGCAATAGTAACACCTTCCTAATTATGTTAGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGTAATTCATCAGAATGCAGAATATTTATTTATTTATGGTTATTACAAGATGGAAAAAAACAAAGGTTCTTATCTCATACTCCCTCCGTCCCAAAATATAAGGGATTTTGGATGGATTGGACACATCCTAGTTTTACAAATCTGGAAAGGGAGCTTGTAGTGTTATTTAGTTTGTTATTCCATTATTATTTTTAATGTTTGTTGATTGGTAGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGTGTAGCTTTCCCTCTTTAAGTTCAGTTATAAACTGCGGCATGTCTCTCTCTTTATCGGCATCTTCCTGAACTGTTAAAAACATCCTTTAGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGTTAGTTTGTTTAGATGAAATTCAGTACTGAACTAGCTCAATTATAAGTATGTGTTGCTTTTTTGTTTCTGACTTGTACATATTTGAGCATGTGTTTTTTTTTGGAGGCTTACCAGCGTCCCCTTTTGTGTAATCTGTAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGTATTATTATTTTACCTCATTTGTTTACCTGTATAGTATATATGTTAAGTTGATTTAATTAATTGATTCACTTTTCTTATATTTTGTGCAACCTGGACAATATGTGCTCTTTGAAACAGTCAACTCACCCATTTTCGTTTGTACGAGATGTACAGAAATCCTGCAATAAAATTTGAAATTCTGAGTTTTGTTAGTTCACGATATCAAACGTCAAACACCCAAGGGAAATGGCATCGATGATAATAGAGTTCTGACACCAATTATTAATACACAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGTCAGTTCTCTAGTTCTGAGCAGAATTGTGTGTAAACATCATGTTTTTTTCACTAAACTGTATGAACAGAATTTCTTCTACTATGATGCTTACTTGCTTAGTTTTCACGAGATGCATCTGATGATGTTTTCGTATGTGAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGGTATGTACTTTTCCTTGTTTCCCCTCTTTACCTGAATCAACTGGCCCTTTTGGCTGGATTTCTGAACGCATAAAACACACTAAACTAGAAATCAACTGAGCTCACCATACTTCCTGTTGCACAGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</dnaseqindica>|
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| − | Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA005405 EnsemblPlants:BGIOSGA005405]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Indica mRNA]]
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| − | [[Category:Oryza Sativa Indica Group]] | |
| − | [[Category:Indica Genes]] | |
| − | [[Category:Indica Chromosome 2]]
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| − | [[Category:Chromosome 2]]
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Annotated Information
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Structured Information
