Difference between revisions of "Os01g0198000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0198000| Description = RNA dependent RNA polymerase family protein| Version = NM_001048839.1 GI:115435091 GeneID:4327336| Length = 9866 bp|...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0198000|
 
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Description = RNA dependent RNA polymerase family protein|
 
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Version = NM_001048839.1 GI:115435091 GeneID:4327336|
 
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Length = 9866 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0198000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:5306415..5316280|
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CDS = 5306754..5307008,5307107..5307279,5308223..5308370,5309197..5309356,5309694..5309839<br>,5312482..5312707,5313652..5313874,5314054..5314202,5315345..5315514<br>,5316064..5316135,5316221..5316247|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:5306415..5316280
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:5306415..5316280
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggggtctaacaacaccactgaatatcctcttcttattcaactccgcctgttctacaatggatctgctgtaaagggaacagtcctagttgacaagcggcttcctcctaggactatacatatccgaccatcaatgttaaaaataaaaacttatccagaattatctggtgtccaatctgtcaactcattggacatagtctctgcacgaaatgccaagaaaagtctatctggggttcagtccgtgaattcttttgaaatagtctctacaagcaatcgatcaggaaggacattcacatcaaataatttaattgcattacttcactatggaggagttccagaagaattctttatggagcttctgcagactgcgattgaagaggctgacaatgctcgttttgattatgctggcgcactgaacattgcattcaactatgctgacatggaagattcaatgccagcacggatgattctttccggaatcccactagaagagtcgtacttgcaatctaggctggatttcttgtctctactggaaagaaaaggaatcaagaatggaaagataccaattgatgactgctattatttgatgggtactgcagaccctacaggaaaacttggacctaatgaagtctgcgtgatacttgattatggccaagtttctggagatgttcttgtgtataaatatcctggcttacatcctggtgatatacatgtcttgaaggcaacatatagtagcgacatagagaaggttgtgggaaattctaaacatgcgatactcttccctactactggacaacggtctttggctgatgagatggccaatagtgattttgatggtgacatctactgggtctcattaaacccaaagctgttagaacattttaaaccttcgaaaccatgggttccagctattacaccaaatgggaccaagcaaaagggacccgaggattttaatgaatccgagcttgaaagagtgctatttcatgagttcttgaaaacaagatttgcacctagttatgcgcgtgctacggcagctactaactggttagtatatatggatcggctattaactgtttcacttgacgaaagtgaaaagaaactaattgagaaaaagatgctcaagttagttgacctttattatttggctttggatgctccaaagatggggaacaaggtcaatattccacgtgatctaatggtaaaacaatacccccacttcatggaccgcagtccttcgtaccattcgtcgtccatacttggaaaaatctatgataaagcaggtgatccaaaaccgctgcgatctgataatgttcaaccaaccagtatatcatcgctcccatgtttcgcggagagagacgtgcctccagcaatcaagcaactctggcaacaccgctataacgagtacttggctgatagttcacttctctatgccgaagaggcggatgaagaagaaaagaagataaagtttcaggaactctatgaaaagtacaagcatttgctctacggtgcatctgaatttgaagagacaccgagggacctcgacgacgtgttctccgaggcctgtgcaatctaccagatcgcgtatgagaaagcacggtctgccaacaacgtcgccagatgtggcttcgcttggaaagttgccggccgtgcattgtgccatttctacacggtcaagaatgagggtaacgctgtggtttgctcgctccaacttctccgcaacttcagatttaccaagaagtaccgcaagtga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MGSNNTTEYPLLIQLRLFYNGSAVKGTVLVDKRLPPRTIHIRPS                    MLKIKTYPELSGVQSVNSLDIVSARNAKKSLSGVQSVNSFEIVSTSNRSGRTFTSNNL                    IALLHYGGVPEEFFMELLQTAIEEADNARFDYAGALNIAFNYADMEDSMPARMILSGI                    PLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPNEVCVILDYGQ                    VSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFPTTGQRSLADEMANSD                    FDGDIYWVSLNPKLLEHFKPSKPWVPAITPNGTKQKGPEDFNESELERVLFHEFLKTR                    FAPSYARATAATNWLVYMDRLLTVSLDESEKKLIEKKMLKLVDLYYLALDAPKMGNKV                    NIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKAGDPKPLRSDNVQPTSISSLPCFAE                    RDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKHLLYGASEFEE                    TPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVKNEGNAVVC                    SLQLLRNFRFTKKYRK</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>9273..9527#9002..9174#7911..8058#6925..7084#6442..6587#3574..3799#2407..2629#2079..2227#767..936#146..217#34..60#caggacattgtggattgtgctgcaagcaaattgatggggtctaacaacaccactgaatatgtattgtattaactataagatgttctgatttaccccttttctgttttttctatgtttgttattcttatctattttatttttctagcctcttcttattcaactccgcctgttctacaatggatctgctgtaaagggaacagtcctagttgacaagcgggtatgcactgttttctaagacaattagtttgtaagcaggtttggtatcaaaataatttcttcaggattacctctttattccaatcttggttcatagttgcttgaacatctatatattagcgccttccatatgtttgtgccgtacaatcggagattgtctagtacgggtcttgcaatttaatttcataattttttatttattttttagaacacgcaggagaatttcataatatatgattatgtaaaagtagtatacaagaagagccgtatttatccgtgcttcattcaggataggtgtgctatttcttgcatctcatcatttcctaagaccgcctgatcatttctttgtttgttcatgttgacataatctttgctgatatcctcttattgtcatagttgcactggccgagtggccttcactgtcttcaccaatatatgcattgtttacataattttgaagtgtacagatcatgtcctttttctatcttatcttgactgaccttatatcttgagtgtactttataagaaataataaagtctcctgttgcagcttcctcctaggactatacatatccgaccatcaatgttaaaaataaaaacttatccagaattatctggtgtccaatctgtcaactcattggacatagtctctgcacgaaatgccaagaaaagtctatctggggttcagtccgtgaattcttttgaaatagtctctacaaggtatgccaaatatctgagttgcattgctatgttaggtatggtgaataatggcttaacacatattaatgctttgtattgcatgcctacatctttttagatcctctgcagagtataattatgctatcaagtagcattattttcatccctttcgtttttttagttatacgtcacgcatcacgtgtcatctttcgtaagtgtggttgaagccagaaactttgagatgttagttttgcctacggtcgctgttagttttttttgagtatttccagtgcatcctcttttaggcaacgcaaatggccatgaaaaactgcaaacaaggaaaacactggctttgcaattcatgatataatcaggcatgtacgaaatttcagcttaaaatccatgatgtgctaggataaacacagaggacaaattttggtgaattgtagatctctctctctctctctcttctctaaagcccaggagaattgtgcttcatttcattaagacggaaacaaaaaatatataagaaaaataattaaaaaaatggtgaattgtatctctctctctctctatccagatttcctatacggcagaatgaattttgatttgaaaatttgatgctgatagattgattttttgtcaaggttgccattgccattcttcttttccagagtttttcaggaccatccacacaacccacccagatatatttttcccaatttctgctacagttgctatgaggtggcataacttggaaatcagaacaacaaaatacgtttgatgtgttagatgtgaaactcacttttttttttctataaataggattacttgcctttgcttagtaatttgagtttaggtttttggatgagttgttggtacatgaaactcagatgtccaaaggaacgaactctgcatttaaatcattgtggtatttgggattttgggtgggctggtggccagacttggaggttccttactgtggtttaagtgctgtcacatgtctaatcctcatggttggggccggttaggtagaggcaggagggagagtaaagctgagctcattaggtaggtgtgtaaggggtagtaaagctttttgattggcaacaggcagtcagttctattttttgttcacagtaagtaatatcatttctttttctcagcaatcgatcaggaaggacattcacatcaaataatttaattgcattacttcactatggaggagttccagaagaattctttatggagcttctgcagactgcgattgaagaggctgacaatgctcgttttgattatgctggcgcactgaacagttagttcgaactaccctcattgcattgcactgtgttctgtacaatttgtatatatgtgcttcttcattctgtagaacctgtactcatcttactagttgtaatagagttactattttctttatatttttcagtcacctgtccgtgtttgatccggactaatattctcatgttcttgcagttgcattcaactatgctgacatggaagattcaatgccagcacggatgattctttccggaatcccactagaagagtcgtacttgcaatctaggctggatttcttgtctctactggaaagaaaaggaatcaagaatggaaagataccaattgatgactgctattatttgatgggtactgcagaccctacaggaaaacttggacctaatgaagtctgcgtgatactgttagtaatggaaatactcttttgcttcttcttggtgtttgagtgtgtgtttttttgttatgcttcagtgatcctttgttaccacataagataggagtatcattatccaccatgggcatcattggaactactttaatgtcttacagtcttctttagttgtaacgcaccaacattaccatttttcttactatttacaatcctcaattttgaatcacaactcaaaggttagattggttggcatgtattctcttttcgcaaccggactgtattttttattcaaactatccgaaaatagtggcaacaatattggttgcaattgtgaattttgtcagcaaatggagtctaaagaaagtattgaactgacaacataagatcataaatacatgtcatgtatttggaccctcgagactttaatgccattctttagttcattcaacctaattttgaatttcttgagtatatctgtatatggccttttttagctcagtaatttgatctgtttaattgtttttaatagttaggaaaaaaaattctaccaacagatactactgtttttcaatagatgacgacattgattattgatagaacgtttgaccattcatcttattaaaaaatttagtgtaaataacgaaaatataattcatgcttaaagtttttttaatgataaaacaacttgcaacaaaataaatgacacttgtataatttttttgaaaaagaagaatggtcaaatgtcatgccaaaagtcaatgatgtcagctattaaaaaatggggagagtatattggattacgaaaaggggtttgaatttgccaaagataataactttgttctttgctatatatattccttgcataaatgtgcatcaatatacaagtattaatttgtagcgtgcctgttatgttttgggtctttctttacttatttgctttatatgtggttaaacagtgattatggccaagtttctggagatgttcttgtgtataaatatcctggcttacatcctggtgatatacatgtcttgaaggcaacatatagtagcgacatagagaaggttgtgggaaattctaaacatgcgatactcttccctactactggacaacggtctttggctgatgagatggccaatagtgattttgatggtgacatctactgggtctcattaaacccaaaggtatgttaattcctgattgacattttaccgtgaagtttattggaaatcatcgtcttgggagatgcacctaatattgtttttgtgcttgattatcttttatggtcagcaaaatccctgacagagttttgctcagttgcccctagtccacagcgtagttgttccattcatacagcagttatgctactttacccatggtctatgtcgattgtatttatccagtaatgctcttggaaatgatctgttctttataagagaagtgtccgatgttataactccaggaaaaatggctctttcgccaaacctgaggagctaatttggtcactgcacccaaaccaaatgatattaaatgtcatagctcctttgcttttagaagaattcagttattagtatgcttaggttttaatgaggaaaaggcttgttttacaacattaacctcaaacctcaaaagtagacactattcaaaatctggacgatcaaaatcattcactttataccttagcctgaatcggattgtttttacatgacattcattaaggtggcagtaagggccaaggttgaaattatttttgaatttttggaattagtgagttgacataaaaaatatggacaaattctttagtcgcaccttggagtatagttagtctcaagtgaaacagagtatattttagtcagtgaaatgaaaattggcttatttagttttgaacacacctttttccagatgcttatactttatttttctcgtactaaattttctaggctatatatacaccataatattattgagaattttccagaactgattcaggtgttttctgattctgaatgttaaaaaatatacaccaggtataaatggtttttgaattttttatgataactaaatgacttaaattttctttttgattggttgttgggagtattgaaaacttggataaattagtcgaacatttatataaatttgtaggtatttattttttaacattatttttgaagggccagttatactttatctaggtccactgtactggttagaggtttccagaacgttttgaaatagtttactaagtcagtttaaaattggttcggccttgggtgacatcgtcatgttgccaaaacaggtctgcatttggggtgaacttgaaaggtgattggttttgaagttcagggtggtgtttaagaccagtaaagtccacttgggaaaatattttctcgtaaacgcaggagagaaaaaaaatccatttcattaagaagaagtataacacacttacaagttacaaacgagggtttacgaaaaccctcccacaaaaaacacaccacggaaggtgacgcacgaccacaccttcaaggacaacctagctgcccgaggcaagcaacctacagaggaactcttggagcgcatgctctccagctagacaccacaaactagcctcggttgtggtggtggactcacaacctacagaggacttgatccattgaacatgtaatcattctggtctttccaaatctcccaatctactacgataatcaacgagttcaaccccttacgctgctccttaggaatctccttgacaaccttccaccaccatcctgaaaaatgggatactgaaaggctgaggggccgcatccaccaatcccaatttaagatcaaggtccatacttttcctggaaaagacacatgagacaagaatatgcttcatggtttcatcctcttgatgacataggccaggtgtggtaagccacacttggctagacggtctgatgtcgaacatcgattgtcgactgccaatcacaaggaaaaattatgttgtggaggaacccaacttctctaaattcgctcccaagttgcaaacttgattgataagtaagcattgtatgcgacttacttgtgtagaacttgtaagcttctatctatgctcatccagaacatcttgttgcaagattatcccatccaccaagtcccaaatatgtagatactcacaaataacctgaattgtgagttctttaatatcagccacccatatcctattaaccaattcctttgccacagtgcgttgcttccttactcttcggggaattgtctcaagaaggttagggtccaattcagccaatgttttgcgcagccatatatcagtccagaacttggtgttctccccattaccaattatagtttccgtagctacgtagaagagcgcatgaacattgtgacttgtgagatacttggataggcaagctgacccatggtctagaagaatcaattatttgaagcctttctaggttatgtatgtcaagaccacaatactgtattggccggcaaacatgttcccaagacaaaagacagttgctttatcctgtcctttccaaagaaatcctctgcttttcttataatagctttgaacgcccatttgggtggatccatagccatcttaaggtagatagggtcctagggtagctgtttttttagttatgccatgtttgctttttgttgcaaaattgtgcatcgctgtttcattgtgtctttgcattgtttcactatatgtttgcttattattcttgcatgtatatggttttgatatataacagcacattctctcttttgagcttttcaaagattattgctgctctgataataaaaatggtcttttcagctgttagaacattttaaaccttcgaaaccatgggttccagctattacaccaaatgggaccaagcaaaagggacccgaggattttaatgaatccgagcttgaaagagtgctatttcatgagttcttgaaaacaagatttgcacctaggtattaataccaagctcagtttttctaatgtatatttttcattaggaaaccatttctctactgtaaagaaatttacctcatttaacttctagtatatacaacttattgaggtgttcaatacttcaatggatgtcctcccatgcgccaatgatgatcccttgaccgaattcaatatttttataactacaagtgcttgggtatctttttgtatgaatccgattagtacatttttaaatatctaatgttggtgacaattttctgtagctttttaatatatacaaccttataagttttgtacgatctaacatgagtttggatttcttttttctcctttcagttatgcgcgtgctacggcagctactaactggttagtatatatggatcggctattaactgtttcacttgacgaaagtgaaaagaaactaattgagaaaaagatgctcaagttagttgacctttattatttggctttggatgctccaaagatggggaacaaggttaacttcaatcttgggcttacacaatgtttgttgcaaatgcttttacatggaactgaaatccttattaacttatgctttcatctggtattttgataaacaccggaaagaaggaaacaaattgaaccaagaccttgtagtaataattagttaataacaccttgattaagtttggagtgaaatcaattggactattcttatatacatgtcaacatatgaactgaactacttatgaaatcatactgaggaatgtgctgacaagtcagcctatccaattcaatccatatatgctattgggtagtgcgtgtgaaggttattagttgctattatattctattctggtagtaagtactacaaaattatagcaaaatcagtcatatgcacctgaatgttgctatctgctgtggatacactacactggtcttgatgtacatagttatgaagtcactcttttattaaattaatataccataacatgatgattctttgttccattagttgcgtcttgattgtggttgtgtgaacttttaaccatatgtgttaactctcggtatattagcgtgatttaagaatggatgtaccatgcttagttatgggaataactcgttggtatttcatatttggttcttatatattactttttatatgtacagatgcatggccacatgaatgcatttgacatatgaagcagtcagattaagtaaaattacaagatacaaaatgaaatgtgcaattgcatctttagttatttgaagctttgtaatgtgagggtattgaatgcatattgtgctttaacaatttaagctttgcccaccaatcccgacaggtcaatattccacgtgatctaatggtaaaacaatacccccacttcatggaccgcagtccttcgtaccattcgtcgtccatacttggaaaaatctatgataaagcaggtgatccaaaaccgctgcgatctgataatgttcaaccaaccagtaagttgtctttatttagctcccttcttttttcaatttgtttatctgtagtagggatactccacacattctctctattctacctgtagcacatagtaggctacaacttagcttgagcttgcagcagttaaggtggcaatgaggatgttgatattaataaatatatatttcctccatttcacaatgtaagactttctagcattgtccacattcatttagatgctaatgaatctagacatgtgtatgtgtttagattcattagcatctatatgtactccctccgtcccataatataagggattttgagtttttgcttgcactgtttgaccactcattttattaaaaaaatttggaattattatttatttttttgggacttactttattatccaaagtactttaagcacaacttttcgttttttatatttgcataaattttttgaataagatgagtggtcaaacaatacaaacaaaaactcaaaatcccttatattatgggacagagggagtatattggtaatgctagaaagttttacattgtgaaacggagggagtatgtgttatcatggaaagagtttaggactctaggtcagttttgtgagactataggatcatattcgtataatttatatgtaaaattaatggagaacaattacatctattctaataagttgtctgtgtataacccatggtatgctgtatgtcatcactttttttttctatttaactttcaaaaacaaacgctgcaaaaaattttggccatgccatccgatgtggtgtgcttcgcaacatttagaacaactcatgattttggcacagaacacggttgatgtgaattgtgatgtggtgtcacaagcaggtttcatatatttgatgagacaagtactttatgaatgttctctgtaacatgacattccttttctcttttgtttttgataataaggtatatcatcgctcccatgtttcgcggagagagacgtgcctccagcaatcaagcaactctggcaacaccgctataacgagtacttggctgatagttcacttctctatgccgaagaggcggatgaagaagaaaagaagataaagtttcaggaactctatgaaaagtacaagcatgtgagtgtcctgtattcttttgaataccagctttttttttcctaatggttggaaaacagcttcagagttctgacccaatcgctcttgccaacattcagttgctctacggtgcatctgaatttgaagagacaccgagggacctcgacgacgtgttctccgaggcctgtgcaatctaccagatcgcgtatgagaaagcacggtctgccaacaacgtcgccagatgtggcttcgcttggaaagttgccggccgtgcattgtgccatttctacacggtcaagaatgagggtaacgctgtggtttgctcgctccaacttctccgcaacttcagatttaccaagaagtaccgcaagtgaagtagcatcgcatttagggatagttaatttgtatgaagtttggcgtatgtagtattgtaacagcaatataggagcaggagcggactaataaggacttcttaagctgatggtttagtaggaaaatgtcaggacagactttataactaagctgatgggcctattaacatggctgcttgaagtgaacacaagcagtcaagctaaagattgctacgttagctctggaatcatttcagcatgcatgcatgcatcatgtatcactgaacaaatgcacattcagagcttgcatgactgacatgtgaagtctaaatgaaatatcaagagcttgcatattcagagtgg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048839.1 RefSeq:Os01g0198000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
−
[[Category:Chromosome 1]]
 

Latest revision as of 04:36, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information