Difference between revisions of "Os01g0229700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0229700| Description = U box domain containing protein| Version = NM_001049024.1 GI:115435461 GeneID:4325882| Length = 6609 bp| Definition...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0229700|
 
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Description = U box domain containing protein|
 
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Version = NM_001049024.1 GI:115435461 GeneID:4325882|
 
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Length = 6609 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0229700, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:7176335..7182943|
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CDS = 7176335..7176352,7176482..7176736,7177332..7177595,7177671..7177790,7177890..7178021<br>,7178116..7178232,7178315..7178439,7178591..7178900,7179282..7179530<br>,7179623..7179767,7180106..7181335,7181434..7181543,7181748..7182017<br>,7182110..7182943|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:7176335..7182943
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:7176335..7182943
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcggggccgacgccgacgtactcgtcggtggtggcgcacacagcggcgttcctcgcggagctcatcgccgacccgctcctccggcgacacctgctctccgccgccgcggcggcgggcggcgtggggcggaagcagcggcagcacccggcggcgacgctgcaggcgctgtcgctcgtgtcggacgcgctcgacaccgccgcgtccgcgccgccgtcgctgtcctccctccgcgccgccgagcggctgctgctgtcgctccccgtcgcgacccctttgtcgtgcctcctcctcgcgctcgcgtccgcctcgcgccgccgcggcggggcggcggcggcggcggcggccgcggtgctggacctcttcgcgctcgacccggcgctcgcgcggcacgagctcgcgccggcggccttcgaggcgctcttcgcgccgcgcctcctccccgtcatgcgccacttcgccgcgcgccgcgcgtccaccgccgccgccgcggcggaggcggcgtcccatcgcggcgaggacgggtccgtggagaccgccgcgatgtcggcgatgagggttctctccctgatgagcggcgcccaggcgcaggagatgagggacctggagcgcgagtacgagaaggtgctcgacgcgaactgcatagcgtacgcgctctacctaaagaagatccttgaaaccggcgacgcggcgaaggagacgtactccccgccgccaccgcctccagagctcgtattcggcgtcggagacgacgaccaggacggcgacgtcgacgacgagaccacggcggagaccgacgagaccgtcagctcgcagaacgacgtacggtacaacccgatctgggcggacgccgacgaggcggccgacctgtacccgcggcagggcagcggcaaggggtggagggagctgatgcggccgccgagcctgtacccgcagcgcgtgccgccgcacctcatagtgcagcagcagcagtcgtcgccgtcgccgaccggcagaggaagcccggtggcgaggctgcgcgccgggcactcgccggcgacgccttcttccgacgtcagcatggaggactccccctcctcctccgagctcctcgccggcagagaggaaaagcacacggcctcgccgctgtcacggcctgcaggcagagcgcgtccacgcggcgaggaagacgacgacgacgacgtcgccgccatgctctctccggagcacgcgagttctgtgatgggcggcgacggcggcggcgacgtggcgcggcggccggtggtggcgacgcccaaggacttcgtgtgcccgatcacgagccaggtgttcgacgaccccgtcacgctcgagaccgggcagacgtacgagcgccgcgccatccaggagtggctcgaccgcggcaacgccacctgccccatcacgcgccaccgcctccacggcgcccacctccccagcaccaactacgtcctcaagcgcctcatcgccgcctggcgcgaccagaaccccgccgcctcctcctccgcgcccacgccgccgccgccggcgacgacgacgatggatagccccgccgccgcggccccgttcaagatcagctcgccgtcgccggacgccaccgtgagccaggccagcgcgccgtcgccgaccagcgtcatcgcgcaggcgtccctcgacagcgcagtcggcgagctccgcgccgcggtgtcctgcctctgcacgtcggaggagctcgccgactcggagaggtcggtgctccggatcgagcggctatggcgcgaggccgccggtgccgagcacgtcgtcctcgccgcgctcgccaagcccgccgtcgtcaacggcttcgtggagatcctcttcaactccgtgagcgcgcaggtgctccaggtggccgtcttcctcctcgccgagctcgcctcccgcgacgacgccgtcgtgcagacgctgacgagggtggactccgacgtggactgcctcgtcgcgctcttcaagaagggcctcgtcgaggccgtctcgctcatccacctcctctccccctcgccggagcagcttgtcgagatggacatggccgacgcgctggtcgccaccatccggcgaggcggcggcgacgacgacggcggcgcggtggtcaagatgtgcgtcaagccgaaggccgcgtcggtgatcctcctgagtcagatcctcgtcgaaggcggccgggacagctcgtcgccggcggtggccaagtccgccctggtctccgagaggttcatcaggagcgtggcggcgagcttggaagccgagcaggtggaggagagggtcgccgccgtgaggatcctactgcggtgcgtcgccgaggacggccattgccggagcagcatcgtcgagaactcggccctcgccgccgtcctcgacgcgttccacgtcgtcggcgacgccgacaagttcgacatcgtgcggctcctctccgaactgctcaagctcaaacggcgatcagctgctgatcgtcttcttcggacgatcaaggaggcgagctccttcagcatgatgcacacgcttctcgtgtacctgcaatccacgacaccggagcagagccctgtcgttgcagggctacttcttcagctagatctcctagtggagccgaggaagatcagcatgtacagggaggaagcagtggacagcctcatccagtgcctcaagaactcggattacccgagaagccagctgctcgccgccgagactatcatgaatctctccggcaagttctcctcgtcgggccggccactctcacgctcatcgctgcttaagcttgccagggtgaaagagaggcaccggccgtcgcacgatctcagcatttctcgcggcgccggcgaggacgaaatggaggaagagaaggcggcggcggagtgggagaggaaggcggcgtacgcgctggtcagccatgagttcgggctggtgttcgaggcgctgtcggggtgcctcgcggcggccaagaacggcgagctgttcacggcgagcctcgtgtcggcggcatggctggtccgcatgctccccctcctccccgacaccggcgtgctcggcgccgccagggtgtgcctgctccggcagctcgtgctcgtcctccggtcaggcaagcacggcagcgacagggccctcgccatggtggccctcaggagcttcatgaacgatcgcgaggggatgcacgagatcacgacgtacatcaaggacgtgctcaggacgctcagggagctgaagaaatcgtccggcctcgcgttcgagatgctcaagctgctgtcagatggacaagaatccagcattgatatgtggaatcacaaggagctcaatcacgcagactgcagctcgaatggtgaggtcacatcgatcgcctacttcaagggctacatcttctccggccactctgatggaacactaaaggtctgggagggaagtgagaatatccttcgcctagtccatgaatcccaagaacacacgaaagcaatcaccagcttagcagtgctacactcagaggagaaactgttcagtggatcactggatagaactatcagagtgtggcagctccgagacgccctccggtgcgtcgaggtccacgacgccaaggacccggttcagagcctcgccgtcgccgccgccatggcctgcttcgcgccgcagggctccggcgtcaaggtgctaagctggaacaatggtggcggcgccaaggtcctgaacgcgagcaaggtggtgagatccatggcgctggtgcacgggaagctcttctgcggctgcaacgacggcggcgtgcaggagatcgacctggcgagcgggacgatcggcgtgatccagcaagggagcaagaggatcatcggcaaggccagcccgatctactctctgcatcttcacggcgacctcctctacaccggcagcacctcgctcgacggcgcatcagtcaagatatggagcagctcgaactacagcctggtcgggacgataccgtcgtcggtggaggtgaggtcgctggtggtgagctcggacctggtgtacctcggctccaggaatggcgtcgtggagatctggtcgagggagaagctgaccaggatcggcgctctccaggccggcggcggcggcggcagcggccgggtccagtgcatggccgtcgacgccgacggcgatgtcatcgtcgtcgggacatcggacggcagaattcaggcttggggattgacttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MAGPTPTYSSVVAHTAAFLAELIADPLLRRHLLSAAAAAGGVGR                    KQRQHPAATLQALSLVSDALDTAASAPPSLSSLRAAERLLLSLPVATPLSCLLLALAS                    ASRRRGGAAAAAAAAVLDLFALDPALARHELAPAAFEALFAPRLLPVMRHFAARRAST                    AAAAAEAASHRGEDGSVETAAMSAMRVLSLMSGAQAQEMRDLEREYEKVLDANCIAYA                    LYLKKILETGDAAKETYSPPPPPPELVFGVGDDDQDGDVDDETTAETDETVSSQNDVR                    YNPIWADADEAADLYPRQGSGKGWRELMRPPSLYPQRVPPHLIVQQQQSSPSPTGRGS                    PVARLRAGHSPATPSSDVSMEDSPSSSELLAGREEKHTASPLSRPAGRARPRGEEDDD                    DDVAAMLSPEHASSVMGGDGGGDVARRPVVATPKDFVCPITSQVFDDPVTLETGQTYE                    RRAIQEWLDRGNATCPITRHRLHGAHLPSTNYVLKRLIAAWRDQNPAASSSAPTPPPP                    ATTTMDSPAAAAPFKISSPSPDATVSQASAPSPTSVIAQASLDSAVGELRAAVSCLCT                    SEELADSERSVLRIERLWREAAGAEHVVLAALAKPAVVNGFVEILFNSVSAQVLQVAV                    FLLAELASRDDAVVQTLTRVDSDVDCLVALFKKGLVEAVSLIHLLSPSPEQLVEMDMA                    DALVATIRRGGGDDDGGAVVKMCVKPKAASVILLSQILVEGGRDSSSPAVAKSALVSE                    RFIRSVAASLEAEQVEERVAAVRILLRCVAEDGHCRSSIVENSALAAVLDAFHVVGDA                    DKFDIVRLLSELLKLKRRSAADRLLRTIKEASSFSMMHTLLVYLQSTTPEQSPVVAGL                    LLQLDLLVEPRKISMYREEAVDSLIQCLKNSDYPRSQLLAAETIMNLSGKFSSSGRPL                    SRSSLLKLARVKERHRPSHDLSISRGAGEDEMEEEKAAAEWERKAAYALVSHEFGLVF                    EALSGCLAAAKNGELFTASLVSAAWLVRMLPLLPDTGVLGAARVCLLRQLVLVLRSGK                    HGSDRALAMVALRSFMNDREGMHEITTYIKDVLRTLRELKKSSGLAFEMLKLLSDGQE                    SSIDMWNHKELNHADCSSNGEVTSIAYFKGYIFSGHSDGTLKVWEGSENILRLVHESQ                    EHTKAITSLAVLHSEEKLFSGSLDRTIRVWQLRDALRCVEVHDAKDPVQSLAVAAAMA                    CFAPQGSGVKVLSWNNGGGAKVLNASKVVRSMALVHGKLFCGCNDGGVQEIDLASGTI                    GVIQQGSKRIIGKASPIYSLHLHGDLLYTGSTSLDGASVKIWSSSNYSLVGTIPSSVE                    VRSLVVSSDLVYLGSRNGVVEIWSREKLTRIGALQAGGGGGSGRVQCMAVDADGDVIV                    VGTSDGRIQAWGLT</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>6592..6609#6208..6462#5349..5612#5154..5273#4923..5054#4712..4828#4505..4629#4044..4353#3414..3662#3177..3321#1609..2838#1401..1510#927..1196#1..834#atggcggggccgacgccgacgtactcgtcggtggtggcgcacacagcggcgttcctcgcggagctcatcgccgacccgctcctccggcgacacctgctctccgccgccgcggcggcgggcggcgtggggcggaagcagcggcagcacccggcggcgacgctgcaggcgctgtcgctcgtgtcggacgcgctcgacaccgccgcgtccgcgccgccgtcgctgtcctccctccgcgccgccgagcggctgctgctgtcgctccccgtcgcgacccctttgtcgtgcctcctcctcgcgctcgcgtccgcctcgcgccgccgcggcggggcggcggcggcggcggcggccgcggtgctggacctcttcgcgctcgacccggcgctcgcgcggcacgagctcgcgccggcggccttcgaggcgctcttcgcgccgcgcctcctccccgtcatgcgccacttcgccgcgcgccgcgcgtccaccgccgccgccgcggcggaggcggcgtcccatcgcggcgaggacgggtccgtggagaccgccgcgatgtcggcgatgagggttctctccctgatgagcggcgcccaggcgcaggagatgagggacctggagcgcgagtacgagaaggtgctcgacgcgaactgcatagcgtacgcgctctacctaaagaagatccttgaaaccggcgacgcggcgaaggagacgtactccccgccgccaccgcctccagagctcgtattcggcgtcggagacgacgaccaggacggcgacgtcgacgacgagaccacggcggagaccgacgagaccgtcagctcgcagaacgacgtacggtacaacgtaatgctacgaacacaaacctatcccatcagcgtgctcggctcgacggtgtcgacaccatggtgacgtcatgttccggtgatcttttgcagccgatctgggcggacgccgacgaggcggccgacctgtacccgcggcagggcagcggcaaggggtggagggagctgatgcggccgccgagcctgtacccgcagcgcgtgccgccgcacctcatagtgcagcagcagcagtcgtcgccgtcgccgaccggcagaggaagcccggtggcgaggctgcgcgccgggcactcgccggcgacgccttcttccgacgtcagcatggaggactccccctcctcctccgagctcctcgccggcagagaggtcagtgctctgaattagtcttggtgcaactcgtttaatatgtaatctaggacgctaagaaagctaagattagcatcatatctcactccatttgttaattagagaagatgcaggcgatgttttcataaacaaatagagttgttttaaaatacaaagttgaacagatcatagctgaggtttcaatgttgctgtctcgtctcctaggaaaagcacacggcctcgccgctgtcacggcctgcaggcagagcgcgtccacgcggcgaggaagacgacgacgacgacgtcgccgccatgctctctccggagcacgcgaggtaagctagctggcgtcctcgcgctcgcctccaaagcaacaccgttcccgatgtgatgatggcgacgccgcggcggcggcggattattcttaatgcagttctgtgatgggcggcgacggcggcggcgacgtggcgcggcggccggtggtggcgacgcccaaggacttcgtgtgcccgatcacgagccaggtgttcgacgaccccgtcacgctcgagaccgggcagacgtacgagcgccgcgccatccaggagtggctcgaccgcggcaacgccacctgccccatcacgcgccaccgcctccacggcgcccacctccccagcaccaactacgtcctcaagcgcctcatcgccgcctggcgcgaccagaaccccgccgcctcctcctccgcgcccacgccgccgccgccggcgacgacgacgatggatagccccgccgccgcggccccgttcaagatcagctcgccgtcgccggacgccaccgtgagccaggccagcgcgccgtcgccgaccagcgtcatcgcgcaggcgtccctcgacagcgcagtcggcgagctccgcgccgcggtgtcctgcctctgcacgtcggaggagctcgccgactcggagaggtcggtgctccggatcgagcggctatggcgcgaggccgccggtgccgagcacgtcgtcctcgccgcgctcgccaagcccgccgtcgtcaacggcttcgtggagatcctcttcaactccgtgagcgcgcaggtgctccaggtggccgtcttcctcctcgccgagctcgcctcccgcgacgacgccgtcgtgcagacgctgacgagggtggactccgacgtggactgcctcgtcgcgctcttcaagaagggcctcgtcgaggccgtctcgctcatccacctcctctccccctcgccggagcagcttgtcgagatggacatggccgacgcgctggtcgccaccatccggcgaggcggcggcgacgacgacggcggcgcggtggtcaagatgtgcgtcaagccgaaggccgcgtcggtgatcctcctgagtcagatcctcgtcgaaggcggccgggacagctcgtcgccggcggtggccaagtccgccctggtctccgagaggttcatcaggagcgtggcggcgagcttggaagccgagcaggtggaggagagggtcgccgccgtgaggatcctactgcggtgcgtcgccgaggacggccattgccggagcagcatcgtcgagaactcggccctcgccgccgtcctcgacgcgttccacgtcgtcggcgacgccgacaagttcgacatcgtgcggctcctctccgaactgctcaagctcaaacggtaaccccaaagctcctccattttacggtccttaaaaaaaaaatctcgagtaccctactacttagaggcagggtttacaaaaccgtacgatcatcacacaattatcatgtgtgataacattctcagtttttaaatcacggtaaacctcgcggtaaccgtacagttacctcgataaccgccttttctgtggagtggtggtaaccacattcaaaacggtttgatgaacaccacctagaggtagtaaactttacattcaaaaatatatggtatcttcagatatcctcttaagaatgacaaaattatccacatctaaaacaaaatctcaacttatttttcaggcgatcagctgctgatcgtcttcttcggacgatcaaggaggcgagctccttcagcatgatgcacacgcttctcgtgtacctgcaatccacgacaccggagcagagccctgtcgttgcagggctacttcttcagctagatctcctagtaaaaacaactttttctcgcaacatttcttcagatttgtcaaaaaaaatctcatgtttgatggcgagatcaatgcgcaaatggtttgtcaggtggagccgaggaagatcagcatgtacagggaggaagcagtggacagcctcatccagtgcctcaagaactcggattacccgagaagccagctgctcgccgccgagactatcatgaatctctccggcaagttctcctcgtcgggccggccactctcacgctcatcgctgcttaagcttgccagggtgaaagagaggcaccggccgtcgcacgatctcagcatttctcgcggcgccggcgaggacgaaatggtagtattgggaaactattttggtcactaaaggggaatgtctcctcagttcgcttaaaaaccatcttatggttatgaaaaattctttaaaaaatttgaaaacactcatgcaacatgtctataaaattttaggtccaaactcaactcacacgtcgagatataaaaaaaaatacaaattcagtgtgaataatagtatattgtttacatgtgaatttgtctcttttttttcacgatgagcaggtcgaatttgaacttaatttttggtgaactgatagatatcaccgtactttacattgccaattttcagaagttttctctataaaaaaacctgctggatttcatacatcgagttcacttgcgatgtttttttttttttttgtaggaggaagagaaggcggcggcggagtgggagaggaaggcggcgtacgcgctggtcagccatgagttcgggctggtgttcgaggcgctgtcggggtgcctcgcggcggccaagaacggcgagctgttcacggcgagcctcgtgtcggcggcatggctggtccgcatgctccccctcctccccgacaccggcgtgctcggcgccgccagggtgtgcctgctccggcagctcgtgctcgtcctccggtcaggcaagcacggcagcgacagggccctcgccatggtggccctcaggagcttcatgaacgatcgcggttggtcacaccgtccattaccaatcttgccacaagaatttcagaagagagagagagagagagagagagagaactctgaattttttgttattttttggttcagaaagaaagaatctctgaacatttttatcctaacattgtgaaatttcagaggggatgcacgagatcacgacgtacatcaaggacgtgctcaggacgctcagggagctgaagaaatcgtccggcctcgcgttcgagatgctcaagctgctgtcagatggacaagaatccagcattgtaattgcatttttctcagctgttcttgcagcgaatctgaaattccggtttttactgaacatttctgttctttttgttccaggatatgtggaatcacaaggagctcaatcacgcagactgcagctcgaatggtgaggtcacatcgatcgcctacttcaagggctacatcttctccggccactctgatggaacactaaaggtttaattctctctttcaaaattccgaaatttttttcctgagatcataacattgtagtttcagttttagaaatctgtggaatttaaatgttcaggtctgggagggaagtgagaatatccttcgcctagtccatgaatcccaagaacacacgaaagcaatcaccagcttagcagtgctacactcagaggagaaactgttcagtggatcactggatagaactatcagagtatgtctaaattttcttggcaaaatcatgaaacaaaaaagatcgcacaaaatttcagaaatttaacatgttcatctctgctgaacacctgatcaccaggtgtggcagctccgagacgccctccggtgcgtcgaggtccacgacgccaaggacccggttcagagcctcgccgtcgccgccgccatggcctgcttcgcgccgcagggctccggcgtcaaggtgatcgatcgccgatcacatcatccggcgaggcgcttccatggatggccacctaacttggtctgtgttttgcaggtgctaagctggaacaatggtggcggcgccaaggtcctgaacgcgagcaaggtggtgagatccatggcgctggtgcacgggaagctcttctgcggctgcaacgacggcggcgtgcaggagatcgacctggcgagcgggacgatcggcgtgatccagcaagggagcaagaggatcatcggcaaggccagcccgatctactctctgcatcttcacggcgacctcctctacaccggcagcacctcgctcgacggcgcatcagtcaaggtaccaataaaaaagcaaaaatgaaaaactcggaaagcttgataaagttttgacagtttgaaacatgccaaagttcgaactcaaatcatataactctcaactgaaaatgtgtacttcatacaaaacagtcgactctatcatacaactttcaactctggaaacatttatgtgaagagtaattttaccatcctagaggtactatgttttcttctgtaaaatttgatacatctagatactaattatttcaaggtaccaaaatttttagtgtaaaatttaggtacctcaaggtactttttcaagaactttaaaattcctcttatctgaaagtacgtgctgagaacacaactgcgctaaatatagcaatttcgacttgaaactctccgaaaaaaaatgtcattcctatagaagaccaaaactatgaaatatgtcgaggctccgtttgaaacacagcaaagtttgacgaaatttcaatcagaactgaactgtaccctgtgaaattcatgcacacagtcgatgtattagtgtggtttctggtctaggcatgtggtgatgatgaaataggatgtgaattttgttctcttttttctgggtgcagatatggagcagctcgaactacagcctggtcgggacgataccgtcgtcggtggaggtgaggtcgctggtggtgagctcggacctggtgtacctcggctccaggaatggcgtcgtggagatctggtcgagggagaagctgaccaggatcggcgctctccaggccggcggcggcggcggcagcggccgggtccagtgcatggccgtcgacgccgacggcgatgtcatcgtcgtcgggacatcggacggcagaattcaggtttggaaaagaaaatgcatttttttttcttcttctgtttcttggttaaggaattgtagagagcagagctggttgagaatgatgagatttgtttgtggtactcacattgggcttgtcttggttttgcaggcttggggattgacttga</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049024.1 RefSeq:Os01g0229700]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:37, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information