Difference between revisions of "Os01g0617700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0617700| Description = Similar to CENP-C (Fragment)| Version = NM_001050119.1 GI:115438607 GeneID:4326608| Length = 9331 bp| Definition = ...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0617700|
 
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Description = Similar to CENP-C (Fragment)|
 
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Version = NM_001050119.1 GI:115438607 GeneID:4326608|
 
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Length = 9331 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0617700, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:26216175..26225505|
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CDS = 26216229..26216372,26216619..26216806,26216930..26217015,26217094..26217196,26217533..26217735<br>,26217812..26218416,26218519..26218653,26218775..26218802,26220252..26220331<br>,26220608..26220710,26221288..26221370,26221650..26221752,26222331..26222455<br>,26222736..26222838,26223382..26223461,26223830..26223941,26224057..26224164<br>,26225056..26225180|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:26216175..26225505
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:26216175..26225505
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcctcggctgatcccttcctagccgcatcgtccccggcgcacctcctcccccgaaccctcggccccgccgcgccgcccgggaccgccgcgtccccctccgcggcccgcggggcgctgctcgacggcatctcccgaccactgaaagggtccaaggagctagttgagcaggctagaatggcgatgaaggctgtcggggacatagggaagctctatggcggcgatggagcgggggtggctgccgccgctgcggatggcaagaacaaccagctggggagaaggcctgcgccggaccgcaagcgatttcggctcaagaccaagccccccgcgaacaaaccggtgcaaaatgtggactacacagagttactgaacattgaagatcctgatgaatactttttgaccctggaaaagctcgaaagagctgataaggagattaaaaggttaaggggtgaggttccaactgaaggaacatataataaccgaggcattgaaccacctaagctacgacctgggctgttgaggagaaaatcagtccattcttacaagtttagcgccagctctgatgccccagatgccattgaagcacctgcttcccaaacagaaactgtgacagaatcacagactacccaagatgatgtgcatggctcagctcatgaaatgacaacagagcctgtttcttcaagatctagccaagatgctataccagatatctcagcgagagaagattcatttgtttggaaggataacagtttcaccttgaattacttactctccgcattcaaagatctggatgaagacgaagaagaaaatttactccgaaagactttacagattaaagaaataagcataggaaaagtttgtctccctgacttcaatgttccaggtgacacgcctgcaagcaacactactgagcagaaaaatcccatgagtgatcatgcattagaaagaactgcacctggaagcaaccttgctcgaatttcacaattggagaaacgcatttttgttggagatgccctggaagataaacatgcagatctttcaaaagatgatgaatctgatgggtctccggaaagtctgctgtgtaaacaatcacctgtgcgacgttcatctgatgcagtgggtttgatgatcaatgagggctctactgcaatggagaccccaagtcctagcatcaaatctccagagcatgtgcttgaatctgaatcgaaccctccagatggtgtaacaacagatgaacagccaacagaaaattcaccaattggtgtggacagagatagtgaacttgtcaaagagaagggcacatcttccaggcatagtgtttcgttagaggaagatgttatgccaatagattgcacggtttctcctcccgatcatttggaaggtggctcgactgaagtgttgacgaacattacaagtagaaatgtatctccattgcatcatggagatggcaattctgaacatcaggaaatagttggaggtgatgtggcccaagataatccgatccatacactggaaacacccccagaagatactccacagaatcaatctgaaatacatcgtggaagcattgagaaactggcagttgataaaagcaacgcactctccccaagtcaagggaagcaacatagaggcaaaaataagaagcagccatcgaagagaggaaaaagagagacagataatccgatccatacatcagaaacacccccaatggatactaatccacagaatcaatctgaaatacatcgtggaagcattgagaaactggcagttgataaaagcaatgcactctccccaagtaaaggcaaggaacaaagaggcaaaaataagaagcagccatcgaagagaggaaaaagaaagacagacaacctgatccatacaccggaaatacccccagaagatacagacaacacagtacatacaccggaaattcctccagaagatacttatccacagaatcaatctgaaatacatcgtggaaacactgagaaactggcagttgatataaacaatgcactctccccaagtaaaggcaaggaacaaagaggaaacaataagaagcagccatcaaagcgacaaaaaagagcagcaggtgaggcaggtgatttggaaacacacgcaccaaactttgaaccagagattcaacctcatgtgcaggacacagatgttgagcaacagccagcttgtacaagccagtcaccatcaccgagtaatggtacgagtaaaaatgaagttcgaaagagaaataagaagcaagatttgaacagaagaaaaagcttggcagatgcgggtcttacttggcaagcgggtgttagacgaagcacacgaatacggtcaaaacctttgcagcattggcttggtgaaagatttatatatgggcgtatacatggaacaatggccacagtcatcggtgttaaatcattctctcctagtcaggaaggcaaaggcccattgagggtgaaatcctttgttcctgaacagttctcagatttgttagccgaatctgccaagtactga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MASADPFLAASSPAHLLPRTLGPAAPPGTAASPSAARGALLDGI                    SRPLKGSKELVEQARMAMKAVGDIGKLYGGDGAGVAAAAADGKNNQLGRRPAPDRKRF                    RLKTKPPANKPVQNVDYTELLNIEDPDEYFLTLEKLERADKEIKRLRGEVPTEGTYNN                    RGIEPPKLRPGLLRRKSVHSYKFSASSDAPDAIEAPASQTETVTESQTTQDDVHGSAH                    EMTTEPVSSRSSQDAIPDISAREDSFVWKDNSFTLNYLLSAFKDLDEDEEENLLRKTL                    QIKEISIGKVCLPDFNVPGDTPASNTTEQKNPMSDHALERTAPGSNLARISQLEKRIF                    VGDALEDKHADLSKDDESDGSPESLLCKQSPVRRSSDAVGLMINEGSTAMETPSPSIK                    SPEHVLESESNPPDGVTTDEQPTENSPIGVDRDSELVKEKGTSSRHSVSLEEDVMPID                    CTVSPPDHLEGGSTEVLTNITSRNVSPLHHGDGNSEHQEIVGGDVAQDNPIHTLETPP                    EDTPQNQSEIHRGSIEKLAVDKSNALSPSQGKQHRGKNKKQPSKRGKRETDNPIHTSE                    TPPMDTNPQNQSEIHRGSIEKLAVDKSNALSPSKGKEQRGKNKKQPSKRGKRKTDNLI                    HTPEIPPEDTDNTVHTPEIPPEDTYPQNQSEIHRGNTEKLAVDINNALSPSKGKEQRG                    NNKKQPSKRQKRAAGEAGDLETHAPNFEPEIQPHVQDTDVEQQPACTSQSPSPSNGTS                    KNEVRKRNKKQDLNRRKSLADAGLTWQAGVRRSTRIRSKPLQHWLGERFIYGRIHGTM                    ATVIGVKSFSPSQEGKGPLRVKSFVPEQFSDLLAESAKY</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>55..198#445..632#756..841#920..1022#1359..1561#1638..2242#2345..2479#2601..2628#4078..4157#4434..4536#5114..5196#5476..5578#6157..6281#6562..6664#7208..7287#7656..7767#7883..7990#8882..9006#gggagctctccgccaccccgcgcggcggcgagatcgaggcgccgccgccgccgtatggcctcggctgatcccttcctagccgcatcgtccccggcgcacctcctcccccgaaccctcggccccgccgcgccgcccgggaccgccgcgtccccctccgcggcccgcggggcgctgctcgacggcatctcccgaccactggtacgctccccccccctccccgcgctctctagaaccgaatcgatgggtgtgctcgtgcgcggctcgatctcgctcggagtctcctccgagggttttgctgtttttttttcctccccaccccttgttttttctttctagttttttttttttgaggataattctttagaggagaagtgacgaactactgttctgtttgtgtggattttgctcgagctaacatcacaaatgtgtcaatgtgcggggcagaaagggtccaaggagctagttgagcaggctagaatggcgatgaaggctgtcggggacatagggaagctctatggcggcgatggagcgggggtggctgccgccgctgcggatggcaagaacaaccagctggggagaaggcctgcgccggaccgcaagcgatttcggctcaagaccaagccccccgcgaagtaagctacttgtttgttctactgttgtttccctcggtagcttgttcattagctagctacattttgctgtagtaagtggtggttcgagctcaaattacttggttcctttctcttgttctccagcaaaccggtgcaaaatgtggactacacagagttactgaacattgaagatcctgatgaatactttttgaccctggaaaagctcgaaagtaatccatatcgtggcattcaattttggtagctagcaaaagcgtcaacaacactctaacaaccgtccatcaatgcaggagctgataaggagattaaaaggttaaggggtgaggttccaactgaaggaacatataataaccgaggcattgaaccacctaagctacgacctgggctgttgaggtttgcttcttatttctttccaaaactcgggtgactaaataaaatttatgagccacatgggtatataactgcaggaaatcttactttctttctgctatatagcatcttgtgttatgcacttagttgattcaaatgtgtttccttatcatttgctcctgcttatcattgctactgattgagacaaacagtgggagtgtattcagcttcattgtttgtagctactttatgctaactatcgtcactctacaaaggttacttattactgtgatgtacttgaagcatctgcctgaaataaaaagggaattgatccgtgtgttattggtggttaattaccaggagaaaatcagtccattcttacaagtttagcgccagctctgatgccccagatgccattgaagcacctgcttcccaaacagaaactgtgacagaatcacagactacccaagatgatgtgcatggctcagctcatgaaatgacaacagagcctgtttcttcaagatctagccaagatgctataccagatatctcagcgagagaaggtcacttatctcctcatttccaatttgttagtcaatacttgattgtatatttgcttaaatattttcctctgtacagattcatttgtttggaaggataacagtttcaccttgaattacttactctccgcattcaaagatctggatgaagacgaagaagaaaatttactccgaaagactttacagattaaagaaataagcataggaaaagtttgtctccctgacttcaatgttccaggtgacacgcctgcaagcaacactactgagcagaaaaatcccatgagtgatcatgcattagaaagaactgcacctggaagcaaccttgctcgaatttcacaattggagaaacgcatttttgttggagatgccctggaagataaacatgcagatctttcaaaagatgatgaatctgatgggtctccggaaagtctgctgtgtaaacaatcacctgtgcgacgttcatctgatgcagtgggtttgatgatcaatgagggctctactgcaatggagaccccaagtcctagcatcaaatctccagagcatgtgcttgaatctgaatcgaaccctccagatggtgtaacaacagatgaacagccaacagaaaattcaccaattggtgtggacagagatagtgaacttgtcaaagagaagggcacatcttccaggcatagtgtttcgttagaggtagttgttactaaaacttgttcttcggacttatatttgctatggaacttcttctaaaccgttgactctgctgcatatattatgctttattttaaacctcaggaagatgttatgccaatagattgcacggtttctcctcccgatcatttggaaggtggctcgactgaagtgttgacgaacattacaagtagaaatgtatctccattgcatcatggagatggcaattctgaacatcaggtaagttcctggctccctgcagaaacagttattgccaaatttagatcccagcatgtgtaatgtatgttaaacttagtgtgtttaatgcgtacggaactttgatttctctattgtgtgacaggaaatagttggaggtgatgtggcccaaggtactcatttcccttctaatttcagaatattaccttgtaatacttgcaacattttgtcttcatactgcacagccacggcaacaaacttttgcatataatttagagttttagacttgattaaaaaatcttgaagttgcgatggtcgactcagaatggtgcctttttttttcgacatctatcccaatgactttttatgcaattttcaatctttaatctctcttcctctcagtattatcctgtggaatcgttttctgttgtaaccgtgaaatcattcctatcataaatgcaaaagttgctcgatagttgcctgttctgttggaattctttcttgtgactgtagcagtggacattgctatgttgtactgcttaaagaaatggatggtagtgcatattctgcaaatcagctatttattttgtaattgctgagatatttaaagataaagaatgataacacgttgctgttattttgttggcgtgttgacatattagtgccatggaatgatgctcttctggaaataatatgtagaatgatattagtagtttatagtcaaacttccttcttccacttgtttatttatttatttgcatatgctttctgaaaatgaatgccattggactaaaaaagtattatttgctgcatgggattggaagattatttctagctagtatatggaccatgacaattcatcccctcttagaagcatcatcatctagaagaatcagcttcattattttgttgttataataattttgtaccatactacaaacaaatcctgcatttataccagttcattcagaattcagatttggtttgttcaatgtaatgcatttatgtcttcagcaatatgttttggaacctaagtttgttagcactatgcttaccgttcttactagttgcatgaatttgaaaatgtttgccttatataaccatggcctttagtttcttaccatgaaaattgcgtagcacctggtatttgccactgtttgatgaacaccccacaattcattgtgtggcatttacaactgcagaagctgtcttgctctgcaaagtccccccttagcattactttgcagactctaaattacaaacatttgaaaacttaggaaatagacataaaccgtcagccataacattttattacaagctaataaagtctctgttattcctatatactcttgctttcatctcttatcgacaaactcaatcatggtattcaagacattaaaataggatatgcttttgtcaagcactagtatcttacttcttttggaaacttgttatgttgtaatatcagaggggactttgcaaggaataccttatggggacaaatggcacaaaataagttgtttttctttctttttttcatgccataacaactgagaattctattttccaatttctagtttcttcttcttttgttgaggtttaaagcacatttttcttcacagataatccgatccatacactggaaacacccccagaagatactccacagaatcaatctgaaatacatcgtggaagcattgaggtaagtttttcatcattgtaattctttgcgtttgccatagcctttgaaactgctgtaaatattcctactcgaagttagcagcagtagttgatcttttatctctctctactgcaccaatatggatgacatatcactttgttgtcatgtacatagtgctgggaaggcaggaactggcagagttgcaatgatttgtcatattcccttcatcatgtgcatacttatctcagtttatttttgtttgtcttctccttttacatgtcttctttggacttccagaaactggcagttgataaaagcaacgcactctccccaagtcaagggaagcaacatagaggcaaaaataagaagcagccatcgaagagaggaaaaagagagacaggtttgtacctattcttgtttgggcttatatttagtaacttgtaatacatgtatgttgaagaattgttttgacctactatccaaatagctatggccacaaaggactattatccaaatagatgtttggccacaaaggactgttcttacctatggttggctgcttcactgggcattatcgtgctcgttactttgcagactctaaattacaaacatttgaaaacataggaaataaccataaaatgtcagcaaaaacatttctattacaatctaataaagtttctcttattcctcttatctgttctattgctttcatctcttatctacaaactcaaccgtggtatagctgagaagacattgcaataggatatactttcgtcaagcgctagtatctcacttcttttggaaatttgttatgttgtgatatcagagtggactttgcaaggagtaccttatggggacataaatggcacaaaataagctgtttttctttatttcttcaaaccagaacaactgagaattttactttccaatttctcatttcttattcttttgaggtttaaagcacattttcttcacagataatccgatccatacatcagaaacacccccaatggatactaatccacagaatcaatctgaaatacatcgtggaagcattgaggtaagtttttcatcattgtaattctttgtgtttgccatagcctttgaaactgctgtaaatattcctagttgaagttagcagcagtagttgatcatttatctctctaatgcactgatatggatgacatatcgctttgttgtcatgtacatagcgccaggaaggcaggaactggcagagttataatgactttctcatatcgcctgcatcatgtgcatagtaatctcagtttatatttgtttgtcttctcttattacatacttgtattctttgaactttcagaaactggcagttgataaaagcaatgcactctccccaagtaaaggcaaggaacaaagaggcaaaaataagaagcagccatcgaagagaggaaaaagaaagacaggtttgtacctattctactttgggcttatattagtaacttgtaataaatgtatgttgaaggattgttttgacctactatccaaatagttatgtccacaaaggactattatccaaatagctatttgggcacaaatgactgttcttacctatggttggctgcttcactaggcatgatcgtactcattactttgcagaatctaaattgcatacatttgaaaacgtaggaaataaccctaaaacgtcagcgaaagcatttctgtcacaagccaataaagtttctcttattcctcttgtctgtactcttgctttcatctcttatccacaaactcaatcatggtatagctgagaagacattgcaataggatatgctttcgtcaagcactagtatctcacttcctttggaaacttgttatgttgtaatatcagtgaggacttcgcaaggagaaccttatggggacataaatggcacaaaataagctggtttctctttcttttttcaagccagaacaagcgagtttttttactcccaaattttcttttcttattcttttgatttttaaaagcatattttcttctcagacaacctgatccatacaccggaaatacccccagaagatacagacaacacagtacatacaccggaaattcctccagaagatacttatccacagaatcaatctgaaatacatcgtggaaacactgaggtaagttttctcatcattattattttttctgtttgccacagcctttgaaactgctgctgtaagtattcctactcgaagttagcagcattagttgaacatttgtctctctactttattgatatggataacgcatcattgttgtcatttacgtagcaccggtaggcatgggctggcaaaattgcaatgacttttgccatattgcctgcatcatgtttatggaaatgagttgcttatttatttgtcttctttttttacatgcttgactgttttggaatttcagaaactggcagttgatataaacaatgcactctccccaagtaaaggcaaggaacaaagaggaaacaataagaagcagccatcaaagcgacaaaaaagagcagcaggtttgtacctattctgctttgggcttatatttactcatgatacatgtatcttgaaagattgttttgacctagtatccatagctatttggccacaaaggactgttcttagctacggtcggcagcttcactaggcatgaccacgggccttctaagatgggaattcagcatcctttggttccatataatgctggaaagatttgatgagctatctccaactgattcaaactttatttgtcattatgctgtatttttggtgaaacactgaaacctatacgctttctgctggttctatgggatggggtgggacgcgacggtcgagcccacttttgagggtgtttggttcggggacaagtggaacgggatcatctgaccccttccctcaaccaaacagatagttaggactatcccatcccataaacagggatgagtctaacccatcccaccttgtccccacaccaaagacaccctaaaatgtttagggcacatattatggcattaatagtcttcttccgtgtggattactgaagcacattttcttcacaggtgaggcaggtgatttggaaacacacgcaccaaactttgaaccagagattcaacctcatgtgcaggacacagatgttgaggtagatttctttccttgaatattcagtgagcatcttgttctgtatttctgtaaaatatcgtatggatagcatgcgaatagacagcacaaaagcattggatgacttcttgtttatcatgtcatgcatatgttattgaaggccataaaggtacatgtaacatgcttgagcatttaatacatcacccatgttgaggtaatgagggatgagtagtttcgttttattcagtaggttaagatatggacttgtttaggcccctgaagtcacacacagccataaacaagcatcacacagactgacaacttctgttagatagacatattcaccttctgttacatggattaatttcatatttgcttttggacttccagcaacagccagcttgtacaagccagtcaccatcaccgagtaatggtacgagtaaaaatgaagttcgaaagagaaataagaagcaagatttgaacagaagaaaaagcttggcaggtcttacttctgcagattgcaccatttttagattttattcagaaataacaaacacaaatacacaagtataagtaggaagcctgatatttctattttcatgtgttattattatcagatgcgggtcttacttggcaagcgggtgttagacgaagcacacgaatacggtcaaaacctttgcagcattggcttggtgaaagatttatatatgggcgtatacatggaagtaagtataatgatcatgccaacagttttttgaggggaatcaacatcaactgtttttgtgtgtgttcctgtcttttgctgcttctaggcaggaatatataactggtgctaaccagaccttccggtttggaccatgaggttccatactgtctggaaagaagctcttctatacctattttaacagaaccttgatgttaatgctcacaaaattaaatactcatattcctgaggaaaagtatatgaaaacaatagtgcaaatagtaaactggaatagaccgttaacagcctgactacagcctactggcctaactccagtaagttcttcaaaatcctttttttttaatcaaatctgctgctcaggaaatgctgctagtcggaataacttttttttattagttactatattttagttcaggcaattttgttatttccttggttcctccaatgcctccattctccagctgtgctggatagtgttttagcgacttactagatctcattacggttaagtactaatggaacttatatcacgatataggtaagacaaacataagtaagctaacttttgtcttggtggctatgagaaactgccacatgaaagctccatttttcatcctgctagttgtctacttgtctgtacattgataacttgtggagagtagaaagctcctgctttggaagtggaagacagtgggggaagtcagggtaaattacaattggatactgggccagaatctaatactgctataacaatgcttaacttctctttggggtttcatctgcctgtctatgtactattttgcatgcaccctcctgatggtattgttaataaaataacatatgataccaacattaagcaacaaagtttgatttgaactacattcttttgcagcaatggccacagtcatcggtgttaaatcattctctcctagtcaggaaggcaaaggcccattgagggtgaaatcctttgttcctgaacagttctcagatttgttagccgaatctgccaagtactgaggtcctggcccgggaaagtccctatcttcctttctttggacaagttgcattcttcgacatgcatggctcgcgcaacctgtgatctgttccgtatctatgtgttacttttgctgttaatttttcgtcatttgaggtgcttcctcctatattgtagagctaactctgtgtagaagtgtttgtatctgtggagttgcagtgtaatgcatacatgctatgaacttgcatacatgatttattttttttaaaaggaagctgctcggagtcggggcccgggactgcccattttcatttgtagctgttgtgtgttttcaaaaggtaatttcgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050119.1 RefSeq:Os01g0617700]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:49, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information